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Cmc04g0093671 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093671
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr04:5981077..5981421
RNA-Seq ExpressionCmc04g0093671
SyntenyCmc04g0093671
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037383.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.1e-4077.19Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        +S SL+LY T  PFNDPSLY KLVG LQYLTFT  DI FSVN  SQFMHK TVIHF  +KRILRYLCGTPTLGINFRKG FSLQTFCDSDWA DT DR  
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-4179.82Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        MS SL+LY    PFNDP LY +LVG LQYLTFT  DIA SVN  SQFMHKPTVIHFSA+KRILRYLCGTPTLGI FRKGSFSLQTFCDSDWA DT DRRS
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

XP_016902250.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.5e-4278.07Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        MS SL+LY    PFNDPS+YC+LVG LQYLTFT  DIAF VNC SQF+HKPTVIHFSA+KRILRYL GTPTLGI FRKGSFSLQTFCDS+WA DT+DR S
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

XP_016902755.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.5e-3977.19Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        MS SL+LY    PFNDPSLY +LVG LQYLTFT  DIAFSVN  SQFMHKPTVIHFSA+KRILRYL GTPTLGI FR+GSFSLQTFCDSDWA DT DRRS
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
           FI FL  N IS
Subjt:  ILGFIAFLSSNRIS

XP_016902988.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]4.1e-4077.19Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        +S SL+LY T  PFNDPSLY KLVG LQYLTFT  DI FSVN  SQFMHK TVIHF  +KRILRYLCGTPTLGINFRKG FSLQTFCDSDWA DT DR  
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

TrEMBL top hitse value%identityAlignment
A0A1S4E2P5 uncharacterized mitochondrial protein AtMg00810-like1.2e-4278.07Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        MS SL+LY    PFNDPS+YC+LVG LQYLTFT  DIAF VNC SQF+HKPTVIHFSA+KRILRYL GTPTLGI FRKGSFSLQTFCDS+WA DT+DR S
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

A0A1S4E432 uncharacterized mitochondrial protein AtMg00810-like2.0e-4077.19Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        +S SL+LY T  PFNDPSLY KLVG LQYLTFT  DI FSVN  SQFMHK TVIHF  +KRILRYLCGTPTLGINFRKG FSLQTFCDSDWA DT DR  
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

A0A5A7TPR4 Putative mitochondrial protein6.1e-4279.82Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        MS SL+LY    PFNDP LY +LVG LQYLTFT  DIA SVN  SQFMHKPTVIHFSA+KRILRYLCGTPTLGI FRKGSFSLQTFCDSDWA DT DRRS
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

A0A5D3BH82 Putative mitochondrial protein2.0e-4077.19Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        +S SL+LY T  PFNDPSLY KLVG LQYLTFT  DI FSVN  SQFMHK TVIHF  +KRILRYLCGTPTLGINFRKG FSLQTFCDSDWA DT DR  
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          GFIAFL SN IS
Subjt:  ILGFIAFLSSNRIS

A0A5D3C550 Putative mitochondrial protein7.5e-4077.19Show/hide
Query:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS
        MS SL+LY    PFNDPSLY +LVG LQYLTFT  DIAFSVN  SQFMHKPTVIHFSA+KRILRYL GTPTLGI FR+GSFSLQTFCDSDWA DT DRRS
Subjt:  MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
           FI FL  N IS
Subjt:  ILGFIAFLSSNRIS

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1619.2e-1140.21Show/hide
Query:  YCKLVGFLQYL-TFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINF-RKGSFSLQTFCDSDWANDTFDRRSILGFIAFLSSNRIS
        Y   VG + YL   T  D+A +V   SQF   P   H+ A+KR+LRYL  T T G+ F R G+  L  + D+DWA D   RRS  G++  L+   +S
Subjt:  YCKLVGFLQYL-TFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINF-RKGSFSLQTFCDSDWANDTFDRRSILGFIAFLSSNRIS

P92519 Uncharacterized mitochondrial protein AtMg008102.2e-2047.75Show/hide
Query:  LNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILG
        LN  ++T+ + DPS +  +VG LQYLT T  DI+++VN   Q MH+PT+  F  +KR+LRY+ GT   G+   K S  ++Q FCDSDWA  T  RRS  G
Subjt:  LNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILG

Query:  FIAFLSSNRIS
        F  FL  N IS
Subjt:  FIAFLSSNRIS

P93290 Uncharacterized mitochondrial protein AtMg002408.0e-0737.04Show/hide
Query:  YLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILGFIAFL
        YLT T  D+ F+VN  SQF          A+ ++L Y+ GT   G+ +   S   L+ F DSDWA+    RRS+ GF + +
Subjt:  YLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILGFIAFL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.2e-2150.88Show/hide
Query:  SPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKG-SFSLQTFCDSDWANDTFDRRS
        SP L+LY  T    DP+ Y  +VG LQYL FT  DI+++VN  SQFMH PT  H  A+KRILRYL GTP  GI  +KG + SL  + D+DWA D  D  S
Subjt:  SPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKG-SFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          G+I +L  + IS
Subjt:  ILGFIAFLSSNRIS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE29.8e-2148.25Show/hide
Query:  SPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKG-SFSLQTFCDSDWANDTFDRRS
        SP L L+  T    DP+ Y  +VG LQYL FT  D++++VN  SQ+MH PT  H++A+KR+LRYL GTP  GI  +KG + SL  + D+DWA DT D  S
Subjt:  SPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKG-SFSLQTFCDSDWANDTFDRRS

Query:  ILGFIAFLSSNRIS
          G+I +L  + IS
Subjt:  ILGFIAFLSSNRIS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.5e-1238.24Show/hide
Query:  FNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINF-RKGSFSLQTFCDSDWANDTFDRRSILGFIAFLSSNR
        F D   Y +L+G L YL  T LDI+F+VN  SQF   P + H  A+ +IL Y+ GT   G+ +  +    LQ F D+ + +    RRS  G+  FL ++ 
Subjt:  FNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINF-RKGSFSLQTFCDSDWANDTFDRRSILGFIAFLSSNR

Query:  IS
        IS
Subjt:  IS

ATMG00240.1 Gag-Pol-related retrotransposon family protein5.7e-0837.04Show/hide
Query:  YLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILGFIAFL
        YLT T  D+ F+VN  SQF          A+ ++L Y+ GT   G+ +   S   L+ F DSDWA+    RRS+ GF + +
Subjt:  YLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILGFIAFL

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-2147.75Show/hide
Query:  LNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILG
        LN  ++T+ + DPS +  +VG LQYLT T  DI+++VN   Q MH+PT+  F  +KR+LRY+ GT   G+   K S  ++Q FCDSDWA  T  RRS  G
Subjt:  LNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGS-FSLQTFCDSDWANDTFDRRSILG

Query:  FIAFLSSNRIS
        F  FL  N IS
Subjt:  FIAFLSSNRIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCTTCTCTTAACCTCTACATCACTACATCACCTTTTAATGATCCATCTCTATACTGCAAACTAGTTGGTTTCTTACAATATCTTACATTTACTTGCCTTGATAT
TGCCTTCTCTGTAAATTGTTTTAGCCAATTCATGCACAAACCAACTGTCATTCACTTCTCGGCAATCAAACGCATCCTCCGGTATTTATGTGGTACTCCAACCCTTGGAA
TAAATTTTCGAAAAGGTTCGTTCTCTCTTCAAACCTTTTGTGACTCTGATTGGGCAAATGATACTTTTGATAGACGCTCCATCTTAGGATTCATTGCGTTCCTCAGCTCT
AATCGAATCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCTTCTCTTAACCTCTACATCACTACATCACCTTTTAATGATCCATCTCTATACTGCAAACTAGTTGGTTTCTTACAATATCTTACATTTACTTGCCTTGATAT
TGCCTTCTCTGTAAATTGTTTTAGCCAATTCATGCACAAACCAACTGTCATTCACTTCTCGGCAATCAAACGCATCCTCCGGTATTTATGTGGTACTCCAACCCTTGGAA
TAAATTTTCGAAAAGGTTCGTTCTCTCTTCAAACCTTTTGTGACTCTGATTGGGCAAATGATACTTTTGATAGACGCTCCATCTTAGGATTCATTGCGTTCCTCAGCTCT
AATCGAATCTCATAG
Protein sequenceShow/hide protein sequence
MSPSLNLYITTSPFNDPSLYCKLVGFLQYLTFTCLDIAFSVNCFSQFMHKPTVIHFSAIKRILRYLCGTPTLGINFRKGSFSLQTFCDSDWANDTFDRRSILGFIAFLSS
NRIS