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Cmc04g0093871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPol protein
Genome locationCMiso1.1chr04:6281049..6283030
RNA-Seq ExpressionCmc04g0093871
SyntenyCmc04g0093871
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051716.1 hypothetical protein E6C27_scaffold60G001020 [Cucumis melo var. makuwa]8.4e-3092.21Show/hide
Query:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
        MD KSR+ILRNPSHLRPISSVWKSSLISCF SQPVAHRCKTSRRLRRSPSSPSRFNRR NPNPETQAAPTASN H R
Subjt:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
KAA0054735.1 pol protein [Cucumis melo var. makuwa]3.8e-0660.71Show/hide
Query:  PSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQA
        PSHL  ISSVWK S + C PSQ VA  CK SR   RS S PSR +RRL PNP T++
Subjt:  PSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQA
TYK01308.1 hypothetical protein E5676_scaffold827G00080 [Cucumis melo var. makuwa]9.9e-3193.51Show/hide
Query:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
        MDRKSR+ILRNPSHLRPISSVWKSSLISCF SQPVAHRCKTSRRLRRSPSSPSRFNRR NPNPETQAAPTASN H R
Subjt:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
TrEMBL top hitse value%identityAlignment
A0A5A7UBX8 Uncharacterized protein4.0e-3092.21Show/hide
Query:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
        MD KSR+ILRNPSHLRPISSVWKSSLISCF SQPVAHRCKTSRRLRRSPSSPSRFNRR NPNPETQAAPTASN H R
Subjt:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
A0A5A7UM31 Pol protein1.8e-0660.71Show/hide
Query:  PSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQA
        PSHL  ISSVWK S + C PSQ VA  CK SR   RS S PSR +RRL PNP T++
Subjt:  PSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQA
A0A5D3BQM1 Uncharacterized protein4.8e-3193.51Show/hide
Query:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
        MDRKSR+ILRNPSHLRPISSVWKSSLISCF SQPVAHRCKTSRRLRRSPSSPSRFNRR NPNPETQAAPTASN H R
Subjt:  MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTAAGTCACGCATCATCCTCCGCAACCCGAGCCATCTCCGTCCGATATCCTCCGTCTGGAAGTCGTCGCTGATCAGCTGCTTTCCGTCACAGCCCGTCGCTCA
CCGCTGCAAGACAAGCCGTCGATTGCGCAGGTCGCCGTCAAGCCCCAGTCGCTTCAACCGTCGCTTAAACCCGAACCCAGAAACCCAAGCCGCACCCACTGCCAGCAACA
CACACGTCCGTACCTGTACTGTAGCCGAGCTGCCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
TCATCTTTTTCATTGAGAAAGAAAAGAAAAACCATAATTTTCTTGAACCCAAACCCTAGCCTCCTTGCAACTGCCGCCGCCGTCGTGCTCGTTCGATCACCGCCGGAATG
GATCGTAAGTCACGCATCATCCTCCGCAACCCGAGCCATCTCCGTCCGATATCCTCCGTCTGGAAGTCGTCGCTGATCAGCTGCTTTCCGTCACAGCCCGTCGCTCACCG
CTGCAAGACAAGCCGTCGATTGCGCAGGTCGCCGTCAAGCCCCAGTCGCTTCAACCGTCGCTTAAACCCGAACCCAGAAACCCAAGCCGCACCCACTGCCAGCAACACAC
ACGTCCGTACCTGTACTGTAGCCGAGCTGCCTGTCTGAGCCATCCTACACGCGCGAGCCGGCTGTCCGAGCTGCCTTCTGCTTTCTAGTCGAGTCGCCTAGCCGCTTCAC
CTGTCTTTGAGCCGCCAGCCTGTTTTCAGTCCTTTTCACCTGTTTTGGGACATCTTGGACCAATTGATTTTTGGAGCGTGGGATTTCTCTAGTTAGGGGCTTATTCGTGG
CAACCTCGACATAGGATAAGTTATTTCGACTGAATTCTTGAGTCCTTAGTCGTTTGATGGTTAAGTTATGTAAAATGATGTTTTCTAACTATTTAGGACTTCGCTGCTTG
GAAAGCGTGCTTTATTGTTAGAATTCGTTTGAGCAAATCTCCAGGCAGAGGTAGAGGTAAGGGCAAAGGCAAGCTGGCGAATGACCAAAAGTGACCGTGGCGAGCTATAG
GGATCTTTTGCTTCCGCTTTGTGTCATAGTTCAGATTTTGATGTTTTCATTTTATTTTATTCTTTATTTGGTATTTTATTTCTTTAGAATTAGATAGGGCCCGAGTTAGG
ATTTTATTTTTATACTTATCCCTAATCACATTGTTTATGCTTTTAAACGAAAAATTTGAGGTTTTGTTTTATTCTTATCTTAATTTTACGAATTTTATTTATCTTTTAAA
TTGGTAATGACTTCGACTTAGTATAAGGAGTTGGGTCGTTACACAGCCATGATATGTAAACTCTAAGATTTGAAAATTAGCAATCAAATTAGTGAACTCCTAATATCAAA
TTCTAAAATCCTCAATTCAAAATTTGACAACAATCTAAGAAAGTGGATTAGATTTGGATTACCCTTTGATCAAAGACCAAAAGATAAGGAGAACAAATTCTTCACTCCAA
GTTCAAACACTCCACAAGCAAGATAATCAAATTTATCTTAATGTTCTTGGCATGCAACCTTGAGTCAAGAATTGCAAAAGAATGATGAAG
Protein sequenceShow/hide protein sequence
MDRKSRIILRNPSHLRPISSVWKSSLISCFPSQPVAHRCKTSRRLRRSPSSPSRFNRRLNPNPETQAAPTASNTHVRTCTVAELPV