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Cmc04g0093891 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093891
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr04:6287157..6289323
RNA-Seq ExpressionCmc04g0093891
SyntenyCmc04g0093891
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0006412 - translation (biological process)
GO:0034470 - ncRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]2.7e-2991.67Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRP KKRRSYSGDL+DTFR SM+ETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-2787.5Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAG  RP KKRR YSGDL+DTFR SM+ETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]7.2e-2787.5Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPST  SM HDAGSSRP KKRRSY GDL+DTFR SMQETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]2.3e-2888.89Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPSTPTSM HDAGSSRP KKRRSYSGDL+DTFR SM+ETSKEIGKI  W
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]7.2e-2787.5Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPST  SM HDAGSSRP KKRRSY GDL+DTFR SMQETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
TrEMBL top hitse value%identityAlignment
A0A1S3C252 uncharacterized protein At2g29880-like3.5e-2787.5Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPST  SM HDAGSSRP KKRRSY GDL+DTFR SMQETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
A0A5A7U7F7 Retrotransposon protein1.3e-2991.67Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRP KKRRSYSGDL+DTFR SM+ETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
A0A5A7VG45 Retrotransposon protein9.2e-2887.5Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAG  RP KKRR YSGDL+DTFR SM+ETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
A0A5D3BC95 Retrotransposon protein3.5e-2787.5Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPST  SM HDAGSSRP KKRRSY GDL+DTFR SMQETSKEIGKI AW
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
A0A5D3C7T4 Uncharacterized protein1.1e-2888.89Show/hide
Query:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
        M+INLEDFDIPNPHGLEPPSGEDMPSTPTSM HDAGSSRP KKRRSYSGDL+DTFR SM+ETSKEIGKI  W
Subjt:  MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCCATCCACTCCAACAAGTATGGCACATGATGCAGGATC
ATCTAGGCCAAGAAAGAAAAGACGGTCATATTCAGGGGACCTCGTGGACACATTTCGCACAAGTATGCAAGAAACTTCCAAGGAAATTGGAAAGATTGTTGCATGGTAG
mRNA sequenceShow/hide mRNA sequence
TCTCTATTGTCTTTCTTCCAGATCTCTCATCGTCTCTCTCTCCATCTTTTATTCATGTTCTCATTCAAACCCTAGGTTCTTCTTCTTCTCTACGTCTTTTCATCTCCTCA
TTTTTCTCTTCTTTCGTCAAGAATCTTTCGGCGGAGGTCTTCTTTTCTTTTTCTCATACAAAGAAGCAACCGTAAGAGATGCTTTTTTTGGCGGTTGAAATCAGATTCCG
GCAGAGGAAAGTCGAATCCCCACAGAGAAAAGACAGATTTATTCGCGGGTGAGAAAGGTGGATATGCTTGAAGGAGTTTCAATTACCCGATCTGAAAAAGTGAAGGATGA
GTTAATTTTGGATGGAAATGATATTGAACTTGTGTTGCGGTCTTGTGCACTTATTAACTGGATTTTTCTTCTTCACTCTCACATACAAAGTTCATTGCACACTCAAATCA
TTCAGTGAATTATTCTTCTTTGCCTTATTTTGCTGAAATGTCATGTCAAGAACAAGGATATACGGAAGTTCCTTGATGGTATCTATGTCAGCCAGAAGGGAACCATAGTT
GGAGTAGATGAGTGATTAATGCAATTACTACACAAGATATTGAGGAAGATGACATGAACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCT
TCGGGGGAGGACATGCCATCCACTCCAACAAGTATGGCACATGATGCAGGATCATCTAGGCCAAGAAAGAAAAGACGGTCATATTCAGGGGACCTCGTGGACACATTTCG
CACAAGTATGCAAGAAACTTCCAAGGAAATTGGAAAGATTGTTGCATGGTAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGCTGAATTACAGA
CTATTCCTAGAATGGACGTGGACGATTATTTAATTGTAGTCTAGTATCTATTACCTGATCCCATTATGTTGCACGCATTCCATGACTACCCAGTAGAATGGAAGTACAAA
AAATGCTTGCGTATCTTAGGAAGGCAACCATAACCATAGCTAAATGTAACTTTACTTGACTTTAATTCACTTTTGTTTGACCCATTGGTTATGTTTACTTCTGAAACAAA
CTAAACCCCTTGCTTAACTATAACTTTTGTAAACCCCGTAAAATTAAATGACTTGTTATATTTTGTGGATGGATTGTAATATTCCTAATTAG
Protein sequenceShow/hide protein sequence
MNINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPRKKRRSYSGDLVDTFRTSMQETSKEIGKIVAW