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Cmc04g0093911 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093911
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTranscriptional corepressor LEUNIG_HOMOLOG-like isoform X2
Genome locationCMiso1.1chr04:6310623..6313414
RNA-Seq ExpressionCmc04g0093911
SyntenyCmc04g0093911
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042275.1 transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa]1.2e-0793.94Show/hide
Query:  THDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ
        T D NCIFVELSYTIESEEEGSSGAEEFWLFFQ
Subjt:  THDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ
KAA0051724.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.4e-3995.24Show/hide
Query:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
        MQRASDGDLDGLWIVNHGLPTTAHGL TATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ+ +
Subjt:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
TYK01301.1 hypothetical protein E5676_scaffold827G00010 [Cucumis melo var. makuwa]3.4e-3995.24Show/hide
Query:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
        MQRASDGDLDGLWIVNHGLPTTAHGL TATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ+ +
Subjt:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
TrEMBL top hitse value%identityAlignment
A0A5A7TLF6 Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X25.8e-0893.94Show/hide
Query:  THDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ
        T D NCIFVELSYTIESEEEGSSGAEEFWLFFQ
Subjt:  THDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ
A0A5A7U8R8 Reverse transcriptase1.7e-3995.24Show/hide
Query:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
        MQRASDGDLDGLWIVNHGLPTTAHGL TATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ+ +
Subjt:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
A0A5D3BNC8 Uncharacterized protein1.7e-3995.24Show/hide
Query:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
        MQRASDGDLDGLWIVNHGLPTTAHGL TATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQ+ +
Subjt:  MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACGGGCTTCGGACGGCGACCTCGACGGGCTTTGGATTGTGAACCACGGTCTTCCGACGACGGCCCACGGACTTCCGACGGCGACCCACGGCCTTCCGATGGCGAC
CCACTGCAGTCCGACCACTCCCACACTAACTCCGACCCATGATTCCAACTGCATCTTTGTTGAATTATCATACACCATAGAATCTGAAGAAGAAGGAAGTTCTGGAGCTG
AGGAGTTCTGGCTTTTTTTCCAGTTAAATCAATATGTAGGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTCAAACCTTTCATCTCCCCCTTTCTTTCCCAAAACCCTCAATCTCTCCATCTCTATCTCCATATTCAGTCACTCTATCTTCAGCAGCCGTCCATTATAACCCACGCAA
ATGATCCACTGCCAGCCACCATAAACGCGATGGGTTTTAGACGACATCTCCACACGCGACGGGCTTCGTCAGACGGCATCTCGAGACGACGGTCTTCGTCAGACGGCATC
TCCACATGCAACGGGCTTCGGACGGCGACCTCGACGGGCTTTGGATTGTGAACCACGGTCTTCCGACGACGGCCCACGGACTTCCGACGGCGACCCACGGCCTTCCGATG
GCGACCCACTGCAGTCCGACCACTCCCACACTAACTCCGACCCATGATTCCAACTGCATCTTTGTTGAATTATCATACACCATAGAATCTGAAGAAGAAGGAAGTTCTGG
AGCTGAGGAGTTCTGGCTTTTTTTCCAGTTAAATCAATATGTAGGTTGAAGAGATGTGCCTTCCTTTACACTCCGTGGAGATGACATTCTTCAGTTTCGTACATGCCCTG
CTGCTTCTTTTTTTCTCAATGCAGCCAGATGAAATATACAGGATTGGAAGATCAAATATTGGAGGCTGGAGCAGATATTTTGGTTACTTCATCTTACCAAGTTTGCAATG
CCAATGGATTAAGCTTTCTTTGTTTTTGTACTTTTCACTCTGTGATGGCTTTGGGATGTCTTTCTTTACGAAATTTGATCCCCTGTTCAATGAATAGGATCAAATTGGAG
AAATTTCAATCAATTTAAATGAATTGGATTGAAGTTCTTTCGATGAAGTAACATTTCTGGACATTCAAATTGTTATAGGTAGTGGACCTGATGTATAGGAAGCAGACAGT
ATTTAATATCTGGAAGGCTAATGTTTGTGTGCTTAATGATATCTAACCACATCGGTTTAGCTCCATTGTCAAAAGTGCATACAGTAAATCAAGATCCCTATTCTAAATGT
ATGATTACTTATGTAAGATATTAAATATCTTGTAAGTTCTCCAATGTTAAACGTTGCAGAATTAAGTGATCTGTTCAACAGATTGATCGAATGGCATTTAAAATGACATT
TTGTTTTTCATGCTAATGTA
Protein sequenceShow/hide protein sequence
MQRASDGDLDGLWIVNHGLPTTAHGLPTATHGLPMATHCSPTTPTLTPTHDSNCIFVELSYTIESEEEGSSGAEEFWLFFQLNQYVG