| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033021.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.0e-71 | 90.85 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPK F DSEH KHVYKLNKALYGLKQAPRA YDRLTVY RGKGYS+GEIDKTLFIHRKSDQLLVAQIYVDDIIFG FPQ L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
+NNFI IMQSE EMSMVGE SCFLGLQIKQKNDDI ISQEKYARNMVKKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| KAA0041780.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 7.8e-71 | 90.2 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVY+AQPK F DS+H KHVYKLNKALYGLKQAPRA YDRLTVY RGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIF GFPQ L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
+NNFI IMQSEFEMSMVGE SCFLGLQIKQKND IF+SQEKYARNMVKKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| TYJ98791.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.6e-76 | 94.77 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPKDF DSEHSKHVYKLNKALYGLKQAPRA YDRLTVY RGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
VNNFIY+MQSEFEMSMVGE SCFLGLQIKQKNDDIFISQEKYARNMVKKFG +
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| TYK03438.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.0e-71 | 90.85 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPK F DSEH KHVYKLNKALYGLKQAPRA YDRLTVY RGKGYS+GEIDKTLFIHRKSDQLLVAQIYVDDIIFG FPQ L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
+NNFI IMQSE EMSMVGE SCFLGLQIKQKNDDI ISQEKYARNMVKKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| TYK23188.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 7.8e-71 | 89.54 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPKDF DSEH KHVYKLNKALYGLKQAPR Y+RLTVY RGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFP L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
VNNFI IMQSEFEMSMVGE SCFLG QIKQKNDDI ISQ+KYA+NM KKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SU23 Gag-pol polyprotein | 2.9e-71 | 90.85 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPK F DSEH KHVYKLNKALYGLKQAPRA YDRLTVY RGKGYS+GEIDKTLFIHRKSDQLLVAQIYVDDIIFG FPQ L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
+NNFI IMQSE EMSMVGE SCFLGLQIKQKNDDI ISQEKYARNMVKKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| A0A5D3BJA9 Gag-pol polyprotein | 1.7e-76 | 94.77 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPKDF DSEHSKHVYKLNKALYGLKQAPRA YDRLTVY RGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
VNNFIY+MQSEFEMSMVGE SCFLGLQIKQKNDDIFISQEKYARNMVKKFG +
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| A0A5D3BWU5 Gag-pol polyprotein | 2.9e-71 | 90.85 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPK F DSEH KHVYKLNKALYGLKQAPRA YDRLTVY RGKGYS+GEIDKTLFIHRKSDQLLVAQIYVDDIIFG FPQ L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
+NNFI IMQSE EMSMVGE SCFLGLQIKQKNDDI ISQEKYARNMVKKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| A0A5D3DI97 Gag-pol polyprotein | 3.8e-71 | 89.54 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVYVAQPKDF DSEH KHVYKLNKALYGLKQAPR Y+RLTVY RGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFP L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
VNNFI IMQSEFEMSMVGE SCFLG QIKQKNDDI ISQ+KYA+NM KKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| A0A5D3DU96 Gag-pol polyprotein | 3.8e-71 | 90.2 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV SAFLNGYLNEEVY+AQPK F DS+H KHVYKLNKALYGLKQAPRA YDRLTVY RGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIF GFPQ L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
+NNFI IMQSEFEMSMVGE SCFLGLQIKQKND IF+SQEKYARNMVKKFGLE
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.5e-20 | 33.55 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKS--DQLLVAQIYVDDIIFGGFPQ
MDV +AFLNG L EE+Y+ P+ S +S +V KLNKA+YGLKQA R ++ + + +D+ ++I K ++ + +YVDD++
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKS--DQLLVAQIYVDDIIFGGFPQ
Query: VLVNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
+NNF + +F M+ + E F+G++I+ + D I++SQ Y + ++ KF +E
Subjt: VLVNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-18 | 32.05 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSD-QLLVAQIYVDDIIFGGFPQV
+DV +AFL+G L EE+Y+ QP+ F + V KLNK+LYGLKQAPR Y + + + + Y + D ++ R S+ ++ +YVDD++ G +
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSD-QLLVAQIYVDDIIFGGFPQV
Query: LVNNFIYIMQSEFEMSMVGEPSCFLGLQI--KQKNDDIFISQEKYARNMVKKFGLE
L+ + F+M +G LG++I ++ + +++SQEKY ++++F ++
Subjt: LVNNFIYIMQSEFEMSMVGEPSCFLGLQI--KQKNDDIFISQEKYARNMVKKFGLE
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| P25600 Putative transposon Ty5-1 protein YCL074W | 5.3e-14 | 31.47 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
MDV++AFLN ++E +YV QP F + + +V++L +YGLKQAP + + + G+ R E + L+ SD + +YVDD++ +
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQ-KNDDIFISQEKY
+ + + M +G+ FLGL I Q N DI +S + Y
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQ-KNDDIFISQEKY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.6e-21 | 35.57 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
+DVN+AFL G L ++VY++QP F D + +V KL KALYGLKQAPRA Y L Y G+ D +LF+ ++ ++ +YVDDI+ G L
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKK
++N + + F + E FLG++ K+ + +SQ +Y +++ +
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.0e-21 | 34.23 | Show/hide |
Query: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
+DVN+AFL G L +EVY++QP F D + +V +L KA+YGLKQAPRA Y L Y G+ D +LF+ ++ ++ +YVDDI+ G VL
Subjt: MDVNSAFLNGYLNEEVYVAQPKDFADSEHSKHVYKLNKALYGLKQAPRALYDRLTVYFRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVL
Query: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKK
+ + + + F + + FLG++ K+ + +SQ +Y +++ +
Subjt: VNNFIYIMQSEFEMSMVGEPSCFLGLQIKQKNDDIFISQEKYARNMVKK
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