| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036855.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.5e-83 | 70.8 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI SDHGKEFDNED NN CQ +GIHHE + PITPQQNGVVERKNR LQEMARVMIH KN PLNFW + VNT CHIH R+TTR GTT+T
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYELWKGRKPNVKYF +FGSTCYILADREYH+KWDVKS QGIF YSQNSRAYRVF K GTVME IN VVNDFES + N EDDET P TFT
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPKVDTLPDGTDINSEKRSKEVIAN
E+PK D P+ NS + EVI N
Subjt: EVPKVDTLPDGTDINSEKRSKEVIAN
|
|
| KAA0051798.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 9.7e-79 | 74.51 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI SDHGKEFDNED NN+CQ GIHH+ PITPQQNGVVE +N TLQEMARVMIH KNLPLNFW +AVNT CHIHNR+TTRSG TVT
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYEL KGRKPNVKYF +FGSTCYILADREYH+KWD KS QGIF GYSQNSRAYRVF K GTVMETIN VVNDFES + N EDDET P T T
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPK
E+PK
Subjt: EVPK
|
|
| KAA0060126.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 7.4e-79 | 67.39 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI +HG EF+NED NN+CQ +GIHHE + PITPQQNGVVERKNRTLQEMARVMIH KNLPLNFW +AVNT CHIH+R+TTRSGTTVT
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYELWKGRKPN+KYF +FGS CYILADR+YH+KWDVKS+Q IF GYSQNSRAYRVF K GTVMETIN VVNDFES + N E+DET P T T
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPKVDTLPDGTDINSEKRSKEVIANNPEL
E+ K ++ D S + EVI N L
Subjt: EVPKVDTLPDGTDINSEKRSKEVIANNPEL
|
|
| KAA0064117.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.1e-81 | 70.74 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI SDH KEFDNED NN+ Q++ IHHE S P + VERKNRTLQEMARVMIH KNLPL+F +A+NT CHIHNRITTRSG TVT
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYELW GRK NVKYF VFG+TCYILADREYH+KWDVK EQGIF YS NS AYRVF K G VMETIN VVNDFES +INDEDDET+NIPVD
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPKVDTLPDGTDINSEKRSKEVIANNPE
EVPK D L DG+ INSEK SKEVIA+N E
Subjt: EVPKVDTLPDGTDINSEKRSKEVIANNPE
|
|
| TYK05471.1 Copia protein [Cucumis melo var. makuwa] | 4.9e-83 | 71.95 | Show/hide |
Query: KIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELWKGRK
KIIRI SDHGKEFD+ED NN+CQ +GIHHE + PIT QQNGVVERKNRTLQEMARVMIH K+LPLNFW +AVNT CHIHN++TTRSGTTVTLYELWKG K
Subjt: KIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELWKGRK
Query: PNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPKEVPKVDTLP
PNVKYF +FGSTCYILAD EYH+KWDVKS+QGIF GYS+NSRAYR F K GT METIN +VNDFES ++N EDDET P T TL K++PK D+
Subjt: PNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPKEVPKVDTLP
Query: DGTDINSEKRSKEVIANNPEL
D T NS K + EVI N L
Subjt: DGTDINSEKRSKEVIANNPEL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7V0X1 Gag-pol polyprotein | 3.6e-79 | 67.39 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI +HG EF+NED NN+CQ +GIHHE + PITPQQNGVVERKNRTLQEMARVMIH KNLPLNFW +AVNT CHIH+R+TTRSGTTVT
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYELWKGRKPN+KYF +FGS CYILADR+YH+KWDVKS+Q IF GYSQNSRAYRVF K GTVMETIN VVNDFES + N E+DET P T T
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPKVDTLPDGTDINSEKRSKEVIANNPEL
E+ K ++ D S + EVI N L
Subjt: EVPKVDTLPDGTDINSEKRSKEVIANNPEL
|
|
| A0A5A7VAS8 Gag-pol polyprotein | 1.0e-81 | 70.74 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI SDH KEFDNED NN+ Q++ IHHE S P + VERKNRTLQEMARVMIH KNLPL+F +A+NT CHIHNRITTRSG TVT
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYELW GRK NVKYF VFG+TCYILADREYH+KWDVK EQGIF YS NS AYRVF K G VMETIN VVNDFES +INDEDDET+NIPVD
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPKVDTLPDGTDINSEKRSKEVIANNPE
EVPK D L DG+ INSEK SKEVIA+N E
Subjt: EVPKVDTLPDGTDINSEKRSKEVIANNPE
|
|
| A0A5D3BA69 Gag-pol polyprotein | 3.1e-83 | 70.8 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI SDHGKEFDNED NN CQ +GIHHE + PITPQQNGVVERKNR LQEMARVMIH KN PLNFW + VNT CHIH R+TTR GTT+T
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYELWKGRKPNVKYF +FGSTCYILADREYH+KWDVKS QGIF YSQNSRAYRVF K GTVME IN VVNDFES + N EDDET P TFT
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPKVDTLPDGTDINSEKRSKEVIAN
E+PK D P+ NS + EVI N
Subjt: EVPKVDTLPDGTDINSEKRSKEVIAN
|
|
| A0A5D3C0M9 Copia protein | 2.4e-83 | 71.95 | Show/hide |
Query: KIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELWKGRK
KIIRI SDHGKEFD+ED NN+CQ +GIHHE + PIT QQNGVVERKNRTLQEMARVMIH K+LPLNFW +AVNT CHIHN++TTRSGTTVTLYELWKG K
Subjt: KIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELWKGRK
Query: PNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPKEVPKVDTLP
PNVKYF +FGSTCYILAD EYH+KWDVKS+QGIF GYS+NSRAYR F K GT METIN +VNDFES ++N EDDET P T TL K++PK D+
Subjt: PNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPKEVPKVDTLP
Query: DGTDINSEKRSKEVIANNPEL
D T NS K + EVI N L
Subjt: DGTDINSEKRSKEVIANNPEL
|
|
| A0A5D3DCZ8 Gag-pol polyprotein | 4.7e-79 | 74.51 | Show/hide |
Query: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
L K KIIRI SDHGKEFDNED NN+CQ GIHH+ PITPQQNGVVE +N TLQEMARVMIH KNLPLNFW +AVNT CHIHNR+TTRSG TVT
Subjt: LEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVT
Query: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
LYEL KGRKPNVKYF +FGSTCYILADREYH+KWD KS QGIF GYSQNSRAYRVF K GTVMETIN VVNDFES + N EDDET P T T
Subjt: LYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTFTLPK
Query: EVPK
E+PK
Subjt: EVPK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-22 | 34.52 | Show/hide |
Query: IKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRS--GTTVTLYELWK
+K++ + D+G+E+ + + +C KGI + L+ P TPQ NGV ER RT+ E AR M+ L +FW +AV T ++ NRI +R+ ++ T YE+W
Subjt: IKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRS--GTTVTLYELWK
Query: GRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNS-RAYRVFIKKF-----GTVMET--INAVVNDFESVAIRINDEDDETLNIPVDT
+KP +K+ VFG+T Y+ + K+D KS + IF GY N + + +KF V ET +N+ FE+V ++ + ++ E N P D+
Subjt: GRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNS-RAYRVFIKKF-----GTVMET--INAVVNDFESVAIRINDEDDETLNIPVDT
|
|
| P0C2J7 Transposon Ty4-H Gag-Pol polyprotein | 2.4e-08 | 28.57 | Show/hide |
Query: KIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELWKGRK
K+ I SD G EF N+ Y KGIHH L++ NG ER RT+ A ++ NL + FW AV + +I N + +S + L + R+
Subjt: KIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELWKGRK
Query: P---NVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDF
P + F FG I HKK I NS Y+ FI ++ + N + ++
Subjt: P---NVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDF
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-21 | 30.77 | Show/hide |
Query: MLEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTV
++E T +++K R+ SD+G E+ + +F YC GI HE + P TPQ NGV ER NRT+ E R M+ + LP +FW +AV T C++ NR +
Subjt: MLEFTTRKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTV
Query: TLYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTF-TL
+W ++ + + VFG + +E K D KS IF GY YR++ V+ + + V ES D ++ N + F T+
Subjt: TLYELWKGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAYRVFIKKFGTVMETINAVVNDFESVAIRINDEDDETLNIPVDTF-TL
Query: PKEVPKVDTLPDGTDINSEKRSK--EVIANNPEL
P + TD SE+ + EVI +L
Subjt: PKEVPKVDTLPDGTDINSEKRSK--EVIANNPEL
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-11 | 31.76 | Show/hide |
Query: RKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELW
R + +I SD+G EF Y GI H S P TP+ NG+ ERK+R + E ++ ++P +W A ++ NR+ T + ++
Subjt: RKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELW
Query: KGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAY
G PN VFG CY K D KS Q +F GYS AY
Subjt: KGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAY
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.3e-13 | 31.76 | Show/hide |
Query: RKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELW
R + +I + SD+G EF +Y GI H S P TP+ NG+ ERK+R + EM ++ ++P +W A + ++ NR+ T + ++
Subjt: RKRIKIIRILSDHGKEFDNEDFNNYCQLKGIHHELSTPITPQQNGVVERKNRTLQEMARVMIHVKNLPLNFWMKAVNTTCHIHNRITTRSGTTVTLYELW
Query: KGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAY
G+ PN + VFG CY K + KS+Q F GYS AY
Subjt: KGRKPNVKYFDVFGSTCYILADREYHKKWDVKSEQGIFFGYSQNSRAY
|
|
