| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036643.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 0.0e+00 | 98.23 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMFVKFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSE VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLI+ED KTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
Subjt: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
|
|
| KAA0056761.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-294 | 98.26 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSR+TKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMF+KFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIR
HTWELVDLPMGNKPIR
Subjt: HTWELVDLPMGNKPIR
|
|
| TYK05597.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 8.3e-295 | 98.64 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMFVKFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIR
HTWELVDLPMGNKPIR
Subjt: HTWELVDLPMGNKPIR
|
|
| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 0.0e+00 | 98.64 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSR+TKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMF+KFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQ
HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQ
Subjt: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQ
Query: PEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
PEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
Subjt: PEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
|
|
| TYK27931.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 5.8e-296 | 98.08 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMFVKFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDS MWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIRCKWIF
HTWELVDLPMGNKPIRCK F
Subjt: HTWELVDLPMGNKPIRCKWIF
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T166 Ty1-copia retrotransposon protein | 0.0e+00 | 98.23 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMFVKFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSE VDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLI+ED KTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
Subjt: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIR
|
|
| A0A5D3C1A6 Ty1-copia retrotransposon protein | 4.0e-295 | 98.64 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMFVKFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIR
HTWELVDLPMGNKPIR
Subjt: HTWELVDLPMGNKPIR
|
|
| A0A5D3C5T2 Ty1-copia retrotransposon protein | 0.0e+00 | 98.64 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSR+TKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMF+KFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQ
HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQ
Subjt: HTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQ
Query: PEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
PEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
Subjt: PEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
|
|
| A0A5D3DJE2 Ty1-copia retrotransposon protein | 1.2e-294 | 98.26 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSR+TKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMF+KFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIR
HTWELVDLPMGNKPIR
Subjt: HTWELVDLPMGNKPIR
|
|
| A0A5D3DWC4 Ty1-copia retrotransposon protein | 2.8e-296 | 98.08 | Show/hide |
Query: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
+FMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Subjt: MFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIE
Query: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYL R
Subjt: SANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTR
Query: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
TKNEAVSMFVKFKAESENQLGKRIKRLRS+RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGL DNMWGEAVLSACFI
Subjt: TKNEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFI
Query: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Subjt: LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLYAPSLS
Query: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
+RMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDS MWKE IKSELDSLAMN
Subjt: DRMHDPEIVSEIPVSETVDTPNLSCELEPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMN
Query: HTWELVDLPMGNKPIRCKWIF
HTWELVDLPMGNKPIRCK F
Subjt: HTWELVDLPMGNKPIRCKWIF
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.1e-83 | 30.12 | Show/hide |
Query: ILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGY-LSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFAS
I++L + ++L +VL+ NL+S L AG+ I + V ++KNG V K + N + V+N + + NA + LWH R GH++
Subjt: ILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGY-LSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFAS
Query: IRKLK------DMRLINTSETHETGKCSICIESKFHKKPFKPVEYRT--TELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNEAVSM
+ ++K D L+N E C C+ K + PFK ++ +T L ++HSD+ T + KNY+V FVD ++ + YL + K++ SM
Subjt: IRKLK------DMRLINTSETHETGKCSICIESKFHKKPFKPVEYRT--TELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNEAVSM
Query: FVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNRIPHKR
F F A+SE ++ L + G EY +++FC GI + T P++PQ NG++ER RT+ E M+ + L + WGEAVL+A +++NRIP +
Subjt: FVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNRIPHKR
Query: L---DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQN------SAAYRFMCLNDKTINESR----DAEFFEHVFPLKQSLY
L KTPYE+W P L +L+V+G V + K+ K+F IF+GY N + +F+ D ++E+ A FE VF LK S
Subjt: L---DKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQN------SAAYRFMCLNDKTINESR----DAEFFEHVFPLKQSLY
Query: A-----------------PSLSDRMHDPEIVSEIPVSETVDTPNLSCEL---------------------------------------------------
+ P+ S + + + + SE + PN S ++
Subjt: A-----------------PSLSDRMHDPEIVSEIPVSETVDTPNLSCEL---------------------------------------------------
Query: EPRRSKRQRTEKSFGPDFLS----TFIVERR------------DEIDCNFTNLFL-----IDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMNHTWELV
E R S+ K G D + I+ RR +E D + + L ++ P ++ E D W+E I +EL++ +N+TW +
Subjt: EPRRSKRQRTEKSFGPDFLS----TFIVERR------------DEIDCNFTNLFL-----IDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMNHTWELV
Query: DLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKI
P + +W+F K G RYKARLV G+TQK +DY +T++PV +I++ R +++L +NL +HQMDVKTAFLNG L+EEIYM P+G I
Subjt: DLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKI
Query: SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVY
S + VCKL K++YGLKQA + W+E F L F +S D C+Y
Subjt: SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVY
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.9e-118 | 36.1 | Show/hide |
Query: MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
MGN++ + + G G + +K G TL L +V +VP LR NL+S L+R G + K LTK + KG L+ N +++ I S
Subjt: MGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Query: NLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTK
+LWH R+GH++ ++ L LI+ ++ C C+ K H+ F+ R +L+L++SD+ S GG Y+V+F+DD SR +Y+ +TK
Subjt: NLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTK
Query: NEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILN
++ +F KF A E + G+++KRLRS+ GGEY+ + +E+C S+GI HE T P +PQ NG+AER NRT+ E + +ML + L + WGEAV +AC+++N
Subjt: NEAVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILN
Query: RIPHKRLD-KTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFP------------
R P L + P +W + S+LKV+GC A +P ++T + K+ CIFIGY YR K + SRD F E
Subjt: RIPHKRLD-KTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFP------------
Query: -LKQSLYAPSLSDRMHDPEIVSEIPVSETVDTPNLSCEL---------------------EP-RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFL
+ + PS S+ E ++ VSE + P E +P RRS+R R E P ST V L
Subjt: -LKQSLYAPSLSDRMHDPEIVSEIPVSETVDTPNLSCEL---------------------EP-RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFL
Query: IDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA
D +P++ +E L+ + + ++ E++SL N T++LV+LP G +P++CKW+FK K + + RYKARLVV G+ QK+G+D+ + +SPV K+T+IR
Subjt: IDEDPKTYQEALNSVDSRMWKEPIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA
Query: LIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
+++LAA +L + Q+DVKTAFL+G+LEEEIYM QPEGF+++G+++ VCKL KSLYGLKQAP+QWY KF++ + + + SD CVY K + +I
Subjt: LIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
|
|
| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.1e-18 | 28.48 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVL---TKNGDF--VGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFAS
TS K L N+ Y L ++++ + D VL K+GDF + K YL TI+ N N S S L H LGH NF S
Subjt: TSGKTLSLSNVLYVPSLRRNLVSRSLLNRAGLKIVLEGDKVVL---TKNGDF--VGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFAS
Query: IRK-LKDMRLINTSETH------ETGKCSICIESKF----HKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNE-
I+K LK + E+ T +C C+ K H K + + E + +H+D+ + +Y++SF D+ +RF +Y + E
Subjt: IRK-LKDMRLINTSETH------ETGKCSICIESKF----HKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNE-
Query: -AVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNR
+++F A +NQ R+ ++ +RG EY++KTL +F + GI +T + +G+AER NRTL +L SGL +++W AV + I N
Subjt: -AVSMFVKFKAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNR
Query: IPHKRLDKT
+ + DK+
Subjt: IPHKRLDKT
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.4e-73 | 28.01 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVS-RSLLNRAGLKIVL--EGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASSSAYLIESANLWHGRLGHVN
T + L+L N+LYVP++ +NL+S L N G+ + +V G + +G + L+ +S+ A+ SS A + + WH RLGH
Subjt: TSGKTLSLSNVLYVPSLRRNLVS-RSLLNRAGLKIVL--EGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASSSAYLIESANLWHGRLGHVN
Query: FASIRK-LKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNEAVSMFVKF
+ + + + L + +H+ CS C+ +K +K PF +T LE I+SD+ S YYV FVD ++R+T +Y + K++ F+ F
Subjt: FASIRK-LKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNEAVSMFVKF
Query: KAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNRIPHKRLD-K
K EN+ RI S+ GGE+ L E+ +GI H + P++P+ NG++ERK+R + E +L + + W A A +++NR+P L +
Subjt: KAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNRIPHKRLD-K
Query: TPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLY----------------
+P++ G +PN L+V+GC L + + K+ C+F+GY+ +AY + L + SR F E+ FP L
Subjt: TPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPLKQSLY----------------
Query: --------------APSLSDRMH----------------------DPEIVSEIP--------------------------------------------VS
APS SD H D S P ++
Subjt: --------------APSLSDRMH----------------------DPEIVSEIP--------------------------------------------VS
Query: ETVDTP--NLSCELEPRRSKRQRTEKSFGPDFL------STFIVERRDEIDCNFTNL------FLIDEDPK-----------TYQEALNSVDSRMWKEPI
+++ TP + S P S + P L IV ++ N ++ +I +PK + A+ ++ W+ +
Subjt: ETVDTP--NLSCELEPRRSKRQRTEKSFGPDFL------STFIVERRDEIDCNFTNL------FLIDEDPK-----------TYQEALNSVDSRMWKEPI
Query: KSELDSLAMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLN
SE+++ NHTW+LV P + I C+WIF +K +G + RYKARLV GY Q+ G+DY +T+SPV K T+IR ++ +A + I Q+DV AFL
Subjt: KSELDSLAMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLN
Query: GNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVY
G L +++YM+QP GF + N VCKLRK+LYGLKQAP+ WY + N L+T GF + SDT ++
Subjt: GNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVY
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-72 | 27.18 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVSRSLL---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASSSAYLIESANLWHGRLGHVN
TS ++L L+ VLYVP++ +NL+S L NR ++ +V G + +G + L+ +SM A+ S A + + WH RLGH +
Subjt: TSGKTLSLSNVLYVPSLRRNLVSRSLL---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASSSAYLIESANLWHGRLGHVN
Query: FASIRK-LKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNEAVSMFVKF
A + + + L + +H+ CS C +K HK PF +++ LE I+SD+ S YYV FVD ++R+T +Y + K++ F+ F
Subjt: FASIRK-LKDMRLINTSETHETGKCSICIESKFHKKPFKPVEYRTTELLELIHSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLTRTKNEAVSMFVKF
Query: KAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNRIPHKRLD-K
K+ EN+ RI L S+ GGE+ L+++ +GI H + P++P+ NG++ERK+R + EM +L + + W A A +++NR+P L +
Subjt: KAESENQLGKRIKRLRSNRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLFDNMWGEAVLSACFILNRIPHKRLD-K
Query: TPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPL---------------------
+P++ G PN LKV+GC L + + K+ C F+GY+ +AY + + + SR +F E FP
Subjt: TPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKTINESRDAEFFEHVFPL---------------------
Query: -----------------------------------------------KQSLYAPSLSD---------------------RMHDPEIVSEIPVSETVDTPN
S+ +PS S+ + P + + P S + ++PN
Subjt: -----------------------------------------------KQSLYAPSLSD---------------------RMHDPEIVSEIPVSETVDTPN
Query: LSCEL------------------EPRRSKRQRTEKSFGPDFL-STFIVE--------------------RRDEIDCNFTNLFLIDEDPKTYQEALNSVDS
+ L EP T P L + I++ R+ ++ + +P+T A+ ++
Subjt: LSCEL------------------EPRRSKRQRTEKSFGPDFL-STFIVE--------------------RRDEIDCNFTNLFLIDEDPKTYQEALNSVDS
Query: RMWKEPIKSELDSLAMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMD
W++ + SE+++ NHTW+LV P + I C+WIF +K +G + RYKARLV GY Q+ G+DY +T+SPV K T+IR ++ +A + I Q+D
Subjt: RMWKEPIKSELDSLAMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMD
Query: VKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCI
V AFL G L +E+YM+QP GF + + VC+LRK++YGLKQAP+ WY + L+T GF + SDT ++ G I
Subjt: VKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCI
|
|
