; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0094401 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0094401
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr04:7123051..7123888
RNA-Seq ExpressionCmc04g0094401
SyntenyCmc04g0094401
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032265.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.6e-9485.1Show/hide
Query:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKL+IDRDLPVAS LEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDESRSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF

Query:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI
         DL++I CAHALIVI SLNLNPY FV  YYYAT+L ATY GLV PIGNH DWSVVEVNDNILPPVF+RP  RP+KRRIPSIGEVSK+LKCSRCKRVGH I
Subjt:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI

Query:  RTCTFEPI
        RTC FEPI
Subjt:  RTCTFEPI

KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]8.1e-11586.01Show/hide
Query:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES
        MRWMESIYPSI+GYL+KVGFERWS AY RKR+YQIMTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDES
Subjt:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES

Query:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV
        RSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF DLE+ISCAHALIVI SLNLNPY FV  YYYAT+L ATYGGLV  IGNH DWSVVEVNDNILPP+
Subjt:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV

Query:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI
        F+RP  RP+KRRIPSIGEVSKS KCSRCKR GH IRTCTFEPI
Subjt:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]6.2e-11586.42Show/hide
Query:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES
        MRWMESIYPSI+GYLMKVGFERWSRAY RKR+YQIMTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDES
Subjt:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES

Query:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV
        RSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF DLE+I CAHALIVI SLNLNPY FV  YYYAT+LSATYGGLV PIGNH DWSVV VNDNILPPV
Subjt:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV

Query:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI
        F+RP  RP+KRRIPSIGEVSKS KCSRCKR  H IRTC FEPI
Subjt:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI

TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]6.5e-9686.54Show/hide
Query:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDESRSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF

Query:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI
         DLE+I CAHALIVI SLNLNPY FV  YYYAT+LSATYGGLV PIGNH DWSVVEVNDNILPPVF+RP  RP+KRRIPSIGEVSKS KCSRCKR GH I
Subjt:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI

Query:  RTCTFEPI
        RTC FEPI
Subjt:  RTCTFEPI

XP_016900337.1 PREDICTED: uncharacterized protein LOC107990862 [Cucumis melo]9.0e-11486.42Show/hide
Query:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES
        MR MESIYPSI+GYLMKVGFERWSRAY RKR+YQIMTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDES
Subjt:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES

Query:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV
        RSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF DLE+I  AHALIVI SLNLNPY FV  YYYAT+LSATYGGLV PIGNH DWSVVE+NDNILPPV
Subjt:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV

Query:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI
        F+RP  RP+KRRIPSIGEVSKS KCSRCKR GH IRTCTFEPI
Subjt:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI

TrEMBL top hitse value%identityAlignment
A0A1S4DWH2 uncharacterized protein LOC1079908624.3e-11486.42Show/hide
Query:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES
        MR MESIYPSI+GYLMKVGFERWSRAY RKR+YQIMTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDES
Subjt:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES

Query:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV
        RSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF DLE+I  AHALIVI SLNLNPY FV  YYYAT+LSATYGGLV PIGNH DWSVVE+NDNILPPV
Subjt:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV

Query:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI
        F+RP  RP+KRRIPSIGEVSKS KCSRCKR GH IRTCTFEPI
Subjt:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI

A0A5A7SST5 MuDRA-like transposase7.7e-9585.1Show/hide
Query:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKL+IDRDLPVAS LEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDESRSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF

Query:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI
         DL++I CAHALIVI SLNLNPY FV  YYYAT+L ATY GLV PIGNH DWSVVEVNDNILPPVF+RP  RP+KRRIPSIGEVSK+LKCSRCKRVGH I
Subjt:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI

Query:  RTCTFEPI
        RTC FEPI
Subjt:  RTCTFEPI

A0A5A7V6N4 SWIM-type domain-containing protein3.9e-11586.01Show/hide
Query:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES
        MRWMESIYPSI+GYL+KVGFERWS AY RKR+YQIMTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDES
Subjt:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES

Query:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV
        RSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF DLE+ISCAHALIVI SLNLNPY FV  YYYAT+L ATYGGLV  IGNH DWSVVEVNDNILPP+
Subjt:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV

Query:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI
        F+RP  RP+KRRIPSIGEVSKS KCSRCKR GH IRTCTFEPI
Subjt:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI

A0A5D3BD68 SWIM-type domain-containing protein3.0e-11586.42Show/hide
Query:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES
        MRWMESIYPSI+GYLMKVGFERWSRAY RKR+YQIMTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDES
Subjt:  MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDES

Query:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV
        RSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF DLE+I CAHALIVI SLNLNPY FV  YYYAT+LSATYGGLV PIGNH DWSVV VNDNILPPV
Subjt:  RSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPV

Query:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI
        F+RP  RP+KRRIPSIGEVSKS KCSRCKR  H IRTC FEPI
Subjt:  FKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTIRTCTFEPI

A0A5D3BVP4 SWIM-type domain-containing protein3.1e-9686.54Show/hide
Query:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKL+IDRDLPVASLLEAI+EFLQ  FYERR  ASCLKSVLSSW EGLIRKLVDESRSFI+NPVS+VEFQV DGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSDVEFQVFDGGKNFLVKLNCNSCSCLF

Query:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI
         DLE+I CAHALIVI SLNLNPY FV  YYYAT+LSATYGGLV PIGNH DWSVVEVNDNILPPVF+RP  RP+KRRIPSIGEVSKS KCSRCKR GH I
Subjt:  GDLEKISCAHALIVIPSLNLNPYTFV--YYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKSLKCSRCKRVGHTI

Query:  RTCTFEPI
        RTC FEPI
Subjt:  RTCTFEPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGGATGGAGTCGATATACCCATCTATTAAAGGATATCTAATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTATAGAAAAAGAAAATATCAAATAATGAC
AACAAATATTTGTGAAAGCTTGAATTCTAAGTTGGAGATTGATAGAGACTTACCGGTCGCATCCTTGCTTGAGGCCATTCAAGAGTTTCTTCAATGGTTGTTTTATGAAA
GAAGAAATACAGCCTCATGTTTAAAGAGTGTTTTGAGTTCTTGGGTTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGTTTCATTATGAATCCTGTAAGTGAT
GTTGAATTTCAAGTATTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGTCTTTTTGGGGATCTAGAAAAAATTTCATGTGCTCATGCTCT
TATTGTGATTCCTAGTCTTAATTTGAATCCTTATACATTCGTTTATTATTATGCTACTTTGTTGTCTGCAACTTATGGTGGTTTAGTTCATCCGATTGGTAACCATATTG
ATTGGAGTGTTGTGGAGGTGAATGACAATATATTGCCTCCAGTATTTAAACGTCCACCAAGAAGGCCTAAAAAAAGAAGGATTCCTTCTATTGGTGAAGTTTCAAAGAGC
TTAAAATGTAGTCGTTGTAAGAGAGTCGGTCATACTATTAGAACTTGTACATTTGAACCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGGATGGAGTCGATATACCCATCTATTAAAGGATATCTAATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTATAGAAAAAGAAAATATCAAATAATGAC
AACAAATATTTGTGAAAGCTTGAATTCTAAGTTGGAGATTGATAGAGACTTACCGGTCGCATCCTTGCTTGAGGCCATTCAAGAGTTTCTTCAATGGTTGTTTTATGAAA
GAAGAAATACAGCCTCATGTTTAAAGAGTGTTTTGAGTTCTTGGGTTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGTTTCATTATGAATCCTGTAAGTGAT
GTTGAATTTCAAGTATTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGTCTTTTTGGGGATCTAGAAAAAATTTCATGTGCTCATGCTCT
TATTGTGATTCCTAGTCTTAATTTGAATCCTTATACATTCGTTTATTATTATGCTACTTTGTTGTCTGCAACTTATGGTGGTTTAGTTCATCCGATTGGTAACCATATTG
ATTGGAGTGTTGTGGAGGTGAATGACAATATATTGCCTCCAGTATTTAAACGTCCACCAAGAAGGCCTAAAAAAAGAAGGATTCCTTCTATTGGTGAAGTTTCAAAGAGC
TTAAAATGTAGTCGTTGTAAGAGAGTCGGTCATACTATTAGAACTTGTACATTTGAACCTATTTGA
Protein sequenceShow/hide protein sequence
MRWMESIYPSIKGYLMKVGFERWSRAYYRKRKYQIMTTNICESLNSKLEIDRDLPVASLLEAIQEFLQWLFYERRNTASCLKSVLSSWVEGLIRKLVDESRSFIMNPVSD
VEFQVFDGGKNFLVKLNCNSCSCLFGDLEKISCAHALIVIPSLNLNPYTFVYYYATLLSATYGGLVHPIGNHIDWSVVEVNDNILPPVFKRPPRRPKKRRIPSIGEVSKS
LKCSRCKRVGHTIRTCTFEPI