CuGenDBv2

Gene ID	Cmc04g0094611
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:7532955..7535430
RNA-Seq Expression	Cmc04g0094611
Synteny	Cmc04g0094611
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.14

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ NDPYLVEKR LAEAGQ  EFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPM+GVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.64

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+NDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWK LQTAM TRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.64

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+NDPYLVEKRGLAEAGQ  EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVK PRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+NDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0065873.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV+SKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGVPFVWSKACEDSFQ LKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+ND YLVEKRGLAEAGQTAEFSLSSDGGLLFE RLCVPSD  +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVKAPRQKP GLLQPL IPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQ+TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFE RGKLSPRFVGPFEILERIGPVAYRL LPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

97.14

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ NDPYLVEKR LAEAGQ  EFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPM+GVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

97.64

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+NDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWK LQTAM TRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

97.64

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+NDPYLVEKRGLAEAGQ  EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVK PRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UP94 Pol protein

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPL RDLERAEIAVSVG VTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+NDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7VCI9 Pol protein

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV+SKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGVPFVWSKACEDSFQ LKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLT

Query:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQ+IIDAQ+ND YLVEKRGLAEAGQTAEFSLSSDGGLLFE RLCVPSD  +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        KCLVCQQVKAPRQKP GLLQPL IPEWKWENVSMDFITGL RTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  KCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAM TRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV
        GPELVQ+TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFE RGKLSPRFVGPFEILERIGPVAYRL LPPSLSTVH+VFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHNVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.6e-133

33.82

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT

Query:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK      +  + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HNVFHVSMLRK
        P S+  +  + FHVS L K
Subjt:  PPSLSTV-HNVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

1.6e-133

33.82

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT

Query:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK      +  + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HNVFHVSMLRK
        P S+  +  + FHVS L K
Subjt:  PPSLSTV-HNVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

1.6e-133

33.82

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT

Query:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK      +  + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HNVFHVSMLRK
        P S+  +  + FHVS L K
Subjt:  PPSLSTV-HNVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

1.6e-133

33.82

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT

Query:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK      +  + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HNVFHVSMLRK
        P S+  +  + FHVS L K
Subjt:  PPSLSTV-HNVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

1.6e-133

33.82

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGT

Query:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++    ND  L+    L    +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK      +  + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HNVFHVSMLRK
        P S+  +  + FHVS L K
Subjt:  PPSLSTV-HNVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.7e-27

45.8

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K     W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACGGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGGTACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAATAGAGTGTTTAGGGAGTTTCTAGACACTTTTGTGATTGTGTTTATCGACGATATCTTGATATAC
TCCAAGACGGAGGCCGAACACGAGGAGCATTTACGCATGGTTTTGCAAACACTTCGGGATAATAAATTATACGCAAAGTTCTCGAAGTGTGAGTTTTGGCTGAAGCAGGT
GTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACTGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCT
TTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGTTCCTTTTGTTTGGAGCAAGGCA
TGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCCGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGG
TCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGG
TTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGA
CAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTGTCCCATTCTGC
AGCACTTATTACCAGGCAGGCCCCATTGCTTCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGACAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGA
CTTTGAGGCAGAAGATCATTGATGCTCAGAATAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGT
GGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAA
GATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGCCAGCAGGTTAAGGCACCAAGGCAGA
AACCAGAGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATT
TGGGTTGTGGTGGACAGACTTACTAAATCGGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACA
CGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGACACGAGGTTGGACTTTAGTACGGCTTTCC
ATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATG
GAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGTTGGGGTGAGGTAGGTGAGCA
GAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCAATTCAGAAGATTAGATCACGCATGCATACCGCACAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGC
GGAAGGACCTTGAGTTTGAGGTAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGG
CCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATAATGTTTTTCACGTTTCTATGTTGAGGAAATTGAT
GAGAACTTGA

mRNA sequence

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Protein sequence

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MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY
SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKA
CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGTVTMQLAQLTVQPTLRQKIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDG
GLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPEGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVI
WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMDTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM
EFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVG
PFEILERIGPVAYRLALPPSLSTVHNVFHVSMLRKLMRT

Cmc04g0094611 (gene) of Melon (Charmono) v1.1 genome