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Cmc04g0094681 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0094681
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPhotosystem II reaction center protein Z
Genome locationCMiso1.1chr04:7618265..7618453
RNA-Seq ExpressionCmc04g0094681
SyntenyCmc04g0094681
Gene Ontology termsGO:0042549 - photosystem II stabilization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
InterPro domainsIPR002644 - Photosystem II PsbZ, reaction centre
IPR036512 - Photosystem II PsbZ superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_004841780.1 photosystem II protein Z [Cucumis melo subsp. melo]1.6e-1991.94Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASPEGWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

YP_009004041.1 photosystem II protein Z [Cucumis hystrix]3.7e-1990.32Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASP+GWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

YP_009236277.1 photosystem II protein Z [Gynostemma pentaphyllum]3.7e-1990.32Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL +FALIVTSSILLISVPIVFASP+GWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

YP_009430624.1 photosystem II protein z [Gynostemma cardiospermum]2.8e-1991.94Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVPIVFASP+GWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

YP_009751987.1 photosystem II subunit Z [Cionosicys macranthus]4.8e-1988.71Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASP+GWSGNKN+VF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

TrEMBL top hitse value%identityAlignment
A0A1S4EU04 Photosystem II reaction center protein Z8.0e-2091.94Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASPEGWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

A0A249RXJ9 Photosystem II reaction center protein Z8.0e-2091.94Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASPEGWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

A0A249RZ13 Photosystem II reaction center protein Z8.0e-2091.94Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASPEGWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

A0A249RZC1 Photosystem II reaction center protein Z8.0e-2091.94Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASPEGWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

A0A286NG07 Photosystem II reaction center protein Z8.0e-2091.94Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASPEGWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

SwissProt top hitse value%identityAlignment
P56790 Photosystem II reaction center protein Z3.1e-2187.1Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALI+TSSILLISVP+VFASP+GWS NKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

Q09MI1 Photosystem II reaction center protein Z6.9e-2187.1Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALI TSSILLISVP+VFASP+GWS NKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

Q32902 Photosystem II reaction center protein Z2.4e-2188.71Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASP+GWS NKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

Q4VZN6 Photosystem II reaction center protein Z4.8e-2290.32Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALIVTSSILLISVP+VFASP+GWSGNKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

Q9MTN5 Photosystem II reaction center protein Z5.3e-2187.1Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALI TSS+LLISVP+VFASPEGWS NKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS

Arabidopsis top hitse value%identityAlignment
ATCG00300.1 YCF92.2e-2287.1Show/hide
Query:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS
        M IAFQL VFALI+TSSILLISVP+VFASP+GWS NKNVVF G SLWIGLVFLVGILNSLIS
Subjt:  MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGCTTTCCAATTGACTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCATTGTATTTGCTTCTCCTGAAGGTTGGTCGGGTAACAA
AAATGTTGTATTTTTCGGTATATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTGCTTTCCAATTGACTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCATTGTATTTGCTTCTCCTGAAGGTTGGTCGGGTAACAA
AAATGTTGTATTTTTCGGTATATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA
Protein sequenceShow/hide protein sequence
MNIAFQLTVFALIVTSSILLISVPIVFASPEGWSGNKNVVFFGISLWIGLVFLVGILNSLIS