| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.6e-260 | 99.77 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.6e-260 | 99.77 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.8e-198 | 80.95 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS VI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.6e-260 | 99.77 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| TYK15021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.1e-188 | 72.17 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
M+I+H+GT+NTP++ L +TY VPNLTFNL SVGQLCDLGLT+ FSS+GCQVQD QTGQ IGTGRKVGRLFEL SLQ P+ISAPVTD+ +QWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHAS KLR L S LN++++F F+CL+CK+AKQPALSF KS S+CDKPF LIHSDIWGPAP TV+GYRY+VLFIDD+SRFTWIYFL++RS L + Y
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
++FANMI+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLS SCPEKFWGEAALTSVY INRLPS V+
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
NISPFE+LYGTPP YS+LKVFGCACFVLLH HEHTKLEPRARLC FLGYGTEHKGFRCWDP+S RLRISRHVTFWEH MFS LSSFH S SSP SFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDS-PSNTTSCPPHTSELTESHTTS-----ALPELP---SVPVRNLNMHLSD
S LFP P+S P N + TS ++ + S P++P S VR HL D
Subjt: PSTPLFPTPDS-PSNTTSCPPHTSELTESHTTS-----ALPELP---SVPVRNLNMHLSD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-260 | 99.77 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-198 | 80.95 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS VI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-260 | 99.77 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| A0A5D3CT53 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-188 | 72.17 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
M+I+H+GT+NTP++ L +TY VPNLTFNL SVGQLCDLGLT+ FSS+GCQVQD QTGQ IGTGRKVGRLFEL SLQ P+ISAPVTD+ +QWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHAS KLR L S LN++++F F+CL+CK+AKQPALSF KS S+CDKPF LIHSDIWGPAP TV+GYRY+VLFIDD+SRFTWIYFL++RS L + Y
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
++FANMI+TQFS IK LRTDNA+EYKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLS SCPEKFWGEAALTSVY INRLPS V+
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
NISPFE+LYGTPP YS+LKVFGCACFVLLH HEHTKLEPRARLC FLGYGTEHKGFRCWDP+S RLRISRHVTFWEH MFS LSSFH S SSP SFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDS-PSNTTSCPPHTSELTESHTTS-----ALPELP---SVPVRNLNMHLSD
S LFP P+S P N + TS ++ + S P++P S VR HL D
Subjt: PSTPLFPTPDS-PSNTTSCPPHTSELTESHTTS-----ALPELP---SVPVRNLNMHLSD
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| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-260 | 99.77 | Show/hide |
Query: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Subjt: MSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRL
Query: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Subjt: GHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIY
Query: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Subjt: VDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVI
Query: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Subjt: HNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTD
Query: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
PSTPLFPTPDSPSNTTSCPP TSELTESHTTSALPELPSVP
Subjt: PSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVP
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.2e-42 | 28.76 | Show/hide |
Query: NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPV--FPAISAPVTDNTLFQ-WHLRLGHASSN
N I L + NL SV +L + G++I F G + + V +G L + PV F A S F+ WH R GH S
Subjt: NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPV--FPAISAPVTDNTLFQ-WHLRLGHASSN
Query: KLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQI
KL + + ++ S N + C C KQ L F K + +P ++HSD+ GP T++ YFV+F+D ++ + Y ++ +S ++ +
Subjt: KLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQI
Query: YVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
+ DF + F+ K+ L DN EY + F ++G + PHT Q NG +ER R I + R + + FWGEA LT+ Y+INR+PS+
Subjt: YVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Query: IHNIS--PFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSS
+ + S P+E + P HL+VFG +V + ++ K + ++ F+GY E GF+ WD ++++ ++R V E M +S
Subjt: IHNIS--PFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-52 | 31.73 | Show/hide |
Query: TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLT
T+ L + HVP+L NL S L G F++ ++ ++ VI G G L+ + ++A + ++ WH R+GH S L+ L
Subjt: TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLT
Query: STGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFS
L++ C +C KQ +SF S+ L++SD+ GP ++ G +YFV FIDD SR W+Y L+ + ++Q++ F +++ +
Subjt: STGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFS
Query: SKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGT
K+K LR+DN EY F + + G +++ P T Q NG AER +R I++ VR+ L P+ FWGEA T+ Y+INR PS + P
Subjt: SKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGT
Query: PPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPT-PDS
+YSHLKVFGC F + + TKL+ ++ C F+GYG E G+R WDP+ +++ SR V F E + ++ A +S + P F T P +
Subjt: PPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPT-PDS
Query: PSNTTSCPPHTSELTE
+N TS T E++E
Subjt: PSNTTSCPPHTSELTE
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 4.3e-19 | 25.25 | Show/hide |
Query: HVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTS---LQHSPVFPAISAPVTDNTLFQW-----HLRLGHASSNKLRSLT
H PN+ ++L S+ +L + +T F+ + V + G V+ K G + ++ L + P I+ T + ++ H L HA++ +R
Subjt: HVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTS---LQHSPVFPAISAPVTDNTLFQW-----HLRLGHASSNKLRSLT
Query: STGLLNNVSQFNTFD----------CLHCKMAKQPALSFPKSASL----CDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNR--SSL
N ++ FN D C C + K K + L +PF +H+DI+GP + YF+ F D+ ++F W+Y L +R S+
Subjt: STGLLNNVSQFNTFD----------CLHCKMAKQPALSFPKSASL----CDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNR--SSL
Query: YQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLP
++ I+ QF + + +++ D EY + FL + G + S+ +G AER +R +LD R QL P W A S V N L
Subjt: YQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLP
Query: S
S
Subjt: S
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-63 | 32.75 | Show/hide |
Query: ISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWH
ISH G+ + T + L N +VPN+ NL SV +LC+ G+++ F QV+D TG + G+ L+E PV ++P + T WH
Subjt: ISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWH
Query: LRLGHASSNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSL
RLGH + + L S+ S L+ ++ + F C C + K + F +S +P I+SD+W +P + + YRY+V+F+D ++R+TW+Y L+ +S +
Subjt: LRLGHASSNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSL
Query: YQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLP
+ ++ F N+++ +F ++I +DN E+ + +Q G S PHT + NG +ERKHRHI+++ L S P+ +W A +VY+INRLP
Subjt: YQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLP
Query: SQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHS
+ ++ SPF++L+GT P Y L+VFGCAC+ L + KL+ ++R C FLGY + C + RL ISRHV F E+ S++ A+LS
Subjt: SQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHS
Query: FFTDPSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVPVRNLNMHLSD
+ S P P+ T P ++ H + P PS P RN + S+
Subjt: FFTDPSTPLFPTPDSPSNTTSCPPHTSELTESHTTSALPELPSVPVRNLNMHLSD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.8e-61 | 32.2 | Show/hide |
Query: ISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWH
I+H G+ + PT + L+ +VPN+ NL SV +LC+ +++ F QV+D TG + G+ L+E + S ++P + T WH
Subjt: ISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWH
Query: LRLGHASSNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSL
RLGH S L S+ S L ++ C C + K + F S KP I+SD+W +P +++ YRY+V+F+D ++R+TW+Y L+ +S +
Subjt: LRLGHASSNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSL
Query: YQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLP
++ F ++++ +F ++I L +DN E+ R +L+Q G S PHT + NG +ERKHRHI++ L S P+ +W A +VY+INRLP
Subjt: YQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLP
Query: SQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPH-
+ ++ SPF++L+G PP Y LKVFGCAC+ L + KLE +++ C F+GY + C + RL SRHV F E S ++F S S
Subjt: SQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPH-
Query: --------SFFTDPSTPLF---------------PTPDSPSNTTSCPPHTSELTESHTTSALPELPSVPVRN
S T P+TPL P SPS + +S L S +S P+ P N
Subjt: --------SFFTDPSTPLF---------------PTPDSPSNTTSCPPHTSELTESHTTSALPELPSVPVRN
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