; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0094811 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0094811
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr04:7821941..7823482
RNA-Seq ExpressionCmc04g0094811
SyntenyCmc04g0094811
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-298100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-298100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-29599.03Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQAL KTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDM APQTSP ILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKV STLPS
Subjt:  LIHKLKVVSTLPS

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-298100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

TYK12316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-298100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

TrEMBL top hitse value%identityAlignment
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-946.1e-299100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-948.2e-29699.03Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQAL KTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDM APQTSP ILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKV STLPS
Subjt:  LIHKLKVVSTLPS

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-946.1e-299100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-946.1e-299100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

A0A5D3DWU7 Retrovirus-related Pol polyprotein from transposon TNT 1-946.1e-299100Show/hide
Query:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
        MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL
Subjt:  MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL

Query:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
        AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD
Subjt:  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDD

Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSS

Query:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
        TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ
Subjt:  TESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ

Query:  LIHKLKVVSTLPS
        LIHKLKVVSTLPS
Subjt:  LIHKLKVVSTLPS

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.9e-9639.47Show/hide
Query:  WQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKN
        W++A++ EL A    +TW     P  K  +  +W+F +K +  G+  RYKARLVA+G++Q+Y IDYEETFAPVAR++S R +L++       + QMDVK 
Subjt:  WQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKN

Query:  AFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALF--TRQTPNGIVLLLLYVDDMIITGDDPQAISDLQ
        AFLNGTL EE+YM+ P G +     VC L +A+YGLKQA R WF  F   + +  F +SS D  ++   +   N  + +LLYVDD++I   D   +++ +
Subjt:  AFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALF--TRQTPNGIVLLLLYVDDMIITGDDPQAISDLQ

Query:  CYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTV-TRPDIAYAVH
         YL + F M DL  + +F+G+ I       YLSQ+ Y   +L++  + +    STPL   +     +    +  T  R L+G L+Y+ + TRPD+  AV+
Subjt:  CYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTV-TRPDIAYAVH

Query:  IVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLGD-ALISWRSKKQSVVSRSSTESEYRALADA
        I+S++ +   +  +  + R+LRY+KGT+   L F    +    + G+ D+DWAG   DR+STTGY F + D  LI W +K+Q+ V+ SSTE+EY AL +A
Subjt:  IVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLGD-ALISWRSKKQSVVSRSSTESEYRALADA

Query:  TSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKL
          E +WL++LLT +     +P  ++ DN   I IA+N   H+R KHI+   HF R  +Q+N + L+ I T +Q ADIFTK L + RF +L  KL
Subjt:  TSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.0e-10241.85Show/hide
Query:  EPSSYKEASTNPLWQQ---AMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA
        EP S KE  ++P   Q   AM  E+++L K  T+  V+LP GK+P+ CKW+FK+K   D  + RYKARLV KG+ Q+ GID++E F+PV +MTS+R++L+
Subjt:  EPSSYKEASTNPLWQQ---AMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLA

Query:  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSAL-FTRQTPNGIVLLLLYV
        +AA+    + Q+DVK AFL+G L EE+YM+ P G     +K  VC L ++LYGLKQAPR W+  F S +    +  +  D  + F R + N  ++LLLYV
Subjt:  IAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSAL-FTRQTPNGIVLLLLYV

Query:  DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEI--SSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRL------TPFDGVPLEDPT
        DDM+I G D   I+ L+  L K F+MKDLG     LG++I    +S   +LSQ KY   +L R  + ++   STPL  +++L      T  +        
Subjt:  DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEI--SSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRL------TPFDGVPLEDPT

Query:  LYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWR
         Y   VGSL+Y  V TRPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  +L G++DAD AGD  +R+S+TGY F      ISW+
Subjt:  LYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWR

Query:  SKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIF
        SK Q  V+ S+TE+EY A  +   E+IWL+  L ++G  Q    +++CD+ SAI ++ N ++H RTKHI+   H++R  +   +L +  IST + PAD+ 
Subjt:  SKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIF

Query:  TKALHSPRF
        TK +   +F
Subjt:  TKALHSPRF

P92519 Uncharacterized mitochondrial protein AtMg008102.0e-5249.11Show/hide
Query:  LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYR
        LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA  +LN +G+ D    STPL P    +        DP+ +R
Subjt:  LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYR

Query:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ
         +VG+L YLT+TRPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRSTTG+C +LG  +ISW +K+Q
Subjt:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ

Query:  SVVSRSSTESEYRALADATSELIW
          VSRSSTE+EYRALA   +EL W
Subjt:  SVVSRSSTESEYRALADATSELIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.0e-12947.27Show/hide
Query:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA
        EP +  +A  +  W+ AM +E+ A    HTWD V  PP    I GC+WIF  K +SDGS+ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L +A
Subjt:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA

Query:  AAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDM
          + WP+ Q+DV NAFL GTL+++VYM  PPG      P  VC LR+ALYGLKQAPRAW+    + +  +GF +S  D++LF  Q    IV +L+YVDD+
Subjt:  AAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDM

Query:  IITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIY
        +ITG+DP  + +    L + F +KD   L+YFLG+E     +G +LSQ +Y  DLL R+ +  +   +TP+ P+ +L+ + G  L DPT YR +VGSL Y
Subjt:  IITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIY

Query:  LTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
        L  TRPDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V RSST
Subjt:  LTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST

Query:  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQL
        E+EYR++A+ +SE+ W+  LLT++G   T P +++CDN  A  +  N VFH R KHI  D HF+R+ +QS  L +  +ST DQ AD  TK L    F   
Subjt:  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQL

Query:  IHKLKVVSTLPS
          K+ V    PS
Subjt:  IHKLKVVSTLPS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.2e-12746.29Show/hide
Query:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA
        EP +  +A  +  W+QAM +E+ A    HTWD V  PP    I GC+WIF  K +SDGS+ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L +A
Subjt:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA

Query:  AAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP--PQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDM
          + WP+ Q+DV NAFL GTL++EVYM  PPG      P  VC LR+A+YGLKQAPRAW+    + +  +GF +S  D++LF  Q    I+ +L+YVDD+
Subjt:  AAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPP--PQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDM

Query:  IITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIY
        +ITG+D   +      L + F +K+  +L+YFLG+E      G +LSQ +Y  DLL R+ +  +   +TP+  + +LT   G  L DPT YR +VGSL Y
Subjt:  IITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIY

Query:  LTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST
        L  TRPD++YAV+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V RSST
Subjt:  LTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSST

Query:  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQL
        E+EYR++A+ +SEL W+  LLT++G   + P +++CDN  A  +  N VFH R KHI  D HF+R+ +QS  L +  +ST DQ AD  TK L    F   
Subjt:  ESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQL

Query:  IHKLKVVSTLPS
          K+ V+   PS
Subjt:  IHKLKVVSTLPS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.5e-13651.71Show/hide
Query:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAA
        EPS+Y EA    +W  AMD+E+ A+  THTW+   LPP KKPIGCKW++KIK +SDG+IERYKARLVAKGY+Q+ GID+ ETF+PV ++TSV+ +LAI+A
Subjt:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAA

Query:  AKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------GTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYV
           + L Q+D+ NAFLNG L EE+YMK PP      G + PP  VC L++++YGLKQA R WF  FS T+   GF  S  D   F + T    + +L+YV
Subjt:  AKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------GTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYV

Query:  DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGS
        DD+II  ++  A+ +L+  L   F+++DLG L YFLGLEI+ S++G  + Q KYA DLL+ +G+      S P+DP+V  +   G    D   YR+L+G 
Subjt:  DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGS

Query:  LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSR
        L+YL +TR DI++AV+ +SQF  APR  H  AV++IL YIKGT+G GL +SSQ+ + L  FSDA +      RRST GYC +LG +LISW+SKKQ VVS+
Subjt:  LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSR

Query:  SSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVR
        SS E+EYRAL+ AT E++WL     ++  P + PT+L CDN +AI IA N VFHERTKHIE+DCH VR
Subjt:  SSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVR

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.2e-1851.9Show/hide
Query:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYC
        +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  F+D+DWA  P  RRS TG+C
Subjt:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.4e-5349.11Show/hide
Query:  LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYR
        LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA  +LN +G+ D    STPL P    +        DP+ +R
Subjt:  LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYR

Query:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ
         +VG+L YLT+TRPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRSTTG+C +LG  +ISW +K+Q
Subjt:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQ

Query:  SVVSRSSTESEYRALADATSELIW
          VSRSSTE+EYRALA   +EL W
Subjt:  SVVSRSSTESEYRALADATSELIW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.2e-2249.49Show/hide
Query:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA
        EP S   A  +P W QAM  EL AL++  TW  V  P  +  +GCKW+FK K HSDG+++R KARLVAKG+ QE GI + ET++PV R  ++R++L +A
Subjt:  EPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTA
TGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAG
GATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTT
CTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCG
CCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTA
CTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAG
CATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCT
CAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACGTTGTATAGGC
AACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCC
GTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGA
TCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTG
AATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCAC
AGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCA
ACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATAATGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTA
TGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCTAAAG
GATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTT
CTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCG
CCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTA
CTCGTCAGACGCCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAG
CATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCT
CAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACGTTGTATAGGC
AACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCC
GTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGA
TCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTG
AATATCGTGCACTGGCTGATGCTACTTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCAC
AGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCA
ACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTT
GA
Protein sequenceShow/hide protein sequence
MSLVEPSSYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPL
LQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGK
HFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTA
VLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH
SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS