; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0094841 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0094841
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
Genome locationCMiso1.1chr04:7866979..7867620
RNA-Seq ExpressionCmc04g0094841
SyntenyCmc04g0094841
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73523.1 gag-pol polyprotein [Glycine max]1.1e-8671.7Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        MIGSLLYLTA RPDI Y VG+CARYQ++P+ SHLN VKR++KYV+GT+D+GI+Y + +S  LVGYC ADWAGS  DRKSTSGGCF+LGNN++SWFSKKQN
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLST EAEYIA GS C+Q++WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+LV++KVITL+H+ +  Q+ADIFTK LDA
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACLRV
          F+ L   L +
Subjt:  TTFQHLHACLRV

KAA0034956.1 F5J5.1 [Cucumis melo var. makuwa]1.3e-9280.95Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        +I SLLYLTA RPDIAY VGICA++QSDPRTSHL  VKR+IKYVHGTTDFGILYSYDT+  LVGYC ADW GS  DR+STS GCFFLG     WFSKKQ 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLSTVE EYIA GSGCTQ++WMKNML+EYGI QDVMTLYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+ITLQH+RS SQLADIFTKPLD 
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACL
        TTF+HL A L
Subjt:  TTFQHLHACL

KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.3e-9797.78Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        MIGSLLYLTA RPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRK TSGGCFFLGNNIVSWFSKKQN
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIT
        CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENK +T
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIT

KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.1e-9479.25Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        ++GSLLYLTA RP+IAYVVGICA YQ+DPR +HL AVKR++KYVHGT+DFG++YSYDT+  LVGYC ADWAGS  DRKSTSGGCFFLGNN++SW SKKQN
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLST EAEYIA GSGCTQ++WMKNML+EYG  QD MTLYCDN SAIDISKNPVQHSRTKHIDIRHHFIRELVE+KVI L HIRSN QL DIFTKPLDA
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACLRV
        ++F++L A L V
Subjt:  TTFQHLHACLRV

TYK21311.1 F5J5.1 [Cucumis melo var. makuwa]5.9e-9380.66Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        +I SLLYLTA RPDIAY VGICA++QSDPRTSHL  VKR+IKYVHGTTDFGILYSYDT+  LVGYC ADW GS  DR+STS GCFFLG     WFSKKQ 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLSTVE EYIA GSGCTQ++WMKNML+EYGI QDVMTLYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+ITLQH+RS SQLADIFTKPLD 
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACLRV
        TTF+HL A L V
Subjt:  TTFQHLHACLRV

TrEMBL top hitse value%identityAlignment
A0A5A7SYI8 F5J5.16.4e-9380.95Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        +I SLLYLTA RPDIAY VGICA++QSDPRTSHL  VKR+IKYVHGTTDFGILYSYDT+  LVGYC ADW GS  DR+STS GCFFLG     WFSKKQ 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLSTVE EYIA GSGCTQ++WMKNML+EYGI QDVMTLYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+ITLQH+RS SQLADIFTKPLD 
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACL
        TTF+HL A L
Subjt:  TTFQHLHACL

A0A5D3B7L1 Gag-pol polyprotein1.1e-9797.78Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        MIGSLLYLTA RPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRK TSGGCFFLGNNIVSWFSKKQN
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIT
        CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENK +T
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIT

A0A5D3DCC3 F5J5.12.9e-9380.66Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        +I SLLYLTA RPDIAY VGICA++QSDPRTSHL  VKR+IKYVHGTTDFGILYSYDT+  LVGYC ADW GS  DR+STS GCFFLG     WFSKKQ 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLSTVE EYIA GSGCTQ++WMKNML+EYGI QDVMTLYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+ITLQH+RS SQLADIFTKPLD 
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACLRV
        TTF+HL A L V
Subjt:  TTFQHLHACLRV

A0A5D3DLL1 Gag-pol polyprotein5.2e-9579.25Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        ++GSLLYLTA RP+IAYVVGICA YQ+DPR +HL AVKR++KYVHGT+DFG++YSYDT+  LVGYC ADWAGS  DRKSTSGGCFFLGNN++SW SKKQN
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLST EAEYIA GSGCTQ++WMKNML+EYG  QD MTLYCDN SAIDISKNPVQHSRTKHIDIRHHFIRELVE+KVI L HIRSN QL DIFTKPLDA
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACLRV
        ++F++L A L V
Subjt:  TTFQHLHACLRV

Q84VI2 Gag-pol polyprotein5.2e-8771.7Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        MIGSLLYLTA RPDI Y VG+CARYQ++P+ SHLN VKR++KYV+GT+D+GI+Y + +S  LVGYC ADWAGS  DRKSTSGGCF+LGNN++SWFSKKQN
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CVSLST EAEYIA GS C+Q++WMK ML EY + QDVMTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+LV++KVITL+H+ +  Q+ADIFTK LDA
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQHLHACLRV
          F+ L   L +
Subjt:  TTFQHLHACLRV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.1e-4142.18Show/hide
Query:  MIGSLLYLTAC-RPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFE--LVGYCVADWAGSVHDRKSTSGGCFFLGN-NIVSWFS
        +IG L+Y+  C RPD+   V I +RY S   +     +KR+++Y+ GT D  +++  + +FE  ++GY  +DWAGS  DRKST+G  F + + N++ W +
Subjt:  MIGSLLYLTAC-RPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFE--LVGYCVADWAGSVHDRKSTSGGCFFLGN-NIVSWFS

Query:  KKQNCVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFT
        K+QN V+ S+ EAEY+A+     + LW+K +L    I +++ + +Y DN   I I+ NP  H R KHIDI++HF RE V+N VI L++I + +QLADIFT
Subjt:  KKQNCVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFT

Query:  KPLDATTFQHL
        KPL A  F  L
Subjt:  KPLDATTFQHL

P0CV72 Secreted RxLR effector protein 1615.1e-2341.13Show/hide
Query:  IGSLLYL-TACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        +G+++YL    RPD+A  VG+ +++ SDP  +H  A+KR+++Y+  T  +G+ ++   + +LVGY  ADWAG V  R+STSG  F L    VSW SKKQ 
Subjt:  IGSLLYL-TACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWM
         V+LS+ E EY+A+     + +W+
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-4242.65Show/hide
Query:  IGSLLYLTAC-RPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        +GSL+Y   C RPDIA+ VG+ +R+  +P   H  AVK +++Y+ GTT   + +       L GY  AD AG + +RKS++G  F      +SW SK Q 
Subjt:  IGSLLYLTAC-RPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA
        CV+LST EAEYIA      +M+W+K  L E G+ Q    +YCD+ SAID+SKN + H+RTKHID+R+H+IRE+V+++ + +  I +N   AD+ TK +  
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDA

Query:  TTFQ
          F+
Subjt:  TTFQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-4041.75Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        ++GSL YL   RPDI+Y V   +++   P   HL A+KR+++Y+ GT + GI      +  L  Y  ADWAG   D  ST+G   +LG++ +SW SKKQ 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLD
         V  S+ EAEY +V +  ++M W+ ++L E GI +     +YCDN+ A  +  NPV HSR KHI I +HFIR  V++  + + H+ ++ QLAD  TKPL 
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLD

Query:  ATTFQH
         T FQ+
Subjt:  ATTFQH

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-4040.78Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        ++GSL YL   RPD++Y V   ++Y   P   H NA+KR+++Y+ GT D GI      +  L  Y  ADWAG   D  ST+G   +LG++ +SW SKKQ 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLD
         V  S+ EAEY +V +  +++ W+ ++L E GI +     +YCDN+ A  +  NPV HSR KHI + +HFIR  V++  + + H+ ++ QLAD  TKPL 
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLD

Query:  ATTFQH
           FQ+
Subjt:  ATTFQH

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.9e-3037.57Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        +IG L+YL   R DI++ V   +++   PR +H  AV +++ Y+ GT   G+ YS     +L  +  A +      R+ST+G C FLG +++SW SKKQ 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRE
         VS S+ EAEY A+     +M+W+     E  + +     L+CDN +AI I+ N V H RTKHI+   H +RE
Subjt:  CVSLSTVEAEYIAVGSGCTQMLWMKNMLNEYGI-IQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.9e-1034.09Show/hide
Query:  LYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGC-----FFLG
        +YLT  RPD+ + V   +++ S  RT+ + AV +++ YV GT   G+ YS  +  +L  +  +DWA     R+S +G C     +FLG
Subjt:  LYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGC-----FFLG

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-2238.21Show/hide
Query:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN
        ++G+L YLT  RPDI+Y V I  +   +P  +  + +KR+++YV GT   G+    ++   +  +C +DWAG    R+ST+G C FLG NI+SW +K+Q 
Subjt:  MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQN

Query:  CVSLSTVEAEYIAVGSGCTQMLW
         VS S+ E EY A+     ++ W
Subjt:  CVSLSTVEAEYIAVGSGCTQMLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGAAGCCTTTTATATTTGACAGCATGCAGACCTGATATTGCCTATGTTGTGGGAATATGTGCTCGGTATCAGTCAGATCCTCGTACCTCTCATTTAAATGCAGT
TAAACGAATGATAAAATATGTTCATGGAACAACTGATTTCGGGATTCTGTACTCCTACGATACATCTTTTGAACTGGTGGGATATTGTGTTGCAGATTGGGCAGGTTCTG
TTCATGATCGGAAAAGCACTTCGGGTGGATGTTTCTTTCTTGGGAATAATATTGTTTCATGGTTCAGTAAGAAACAAAATTGTGTATCTCTATCAACTGTAGAAGCGGAG
TATATAGCTGTAGGGAGTGGGTGTACTCAAATGTTATGGATGAAAAATATGTTGAATGAATATGGGATTATCCAAGATGTTATGACCTTATATTGTGATAATATGAGTGC
CATAGATATATCGAAAAATCCAGTCCAGCATAGTCGCACTAAGCACATTGATATAAGGCATCACTTTATTAGAGAACTCGTTGAAAATAAGGTTATTACATTACAACACA
TTCGCTCGAACTCACAATTGGCTGACATTTTCACTAAACCCCTTGATGCAACCACGTTTCAGCATTTGCATGCCTGTTTAAGAGTTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGAAGCCTTTTATATTTGACAGCATGCAGACCTGATATTGCCTATGTTGTGGGAATATGTGCTCGGTATCAGTCAGATCCTCGTACCTCTCATTTAAATGCAGT
TAAACGAATGATAAAATATGTTCATGGAACAACTGATTTCGGGATTCTGTACTCCTACGATACATCTTTTGAACTGGTGGGATATTGTGTTGCAGATTGGGCAGGTTCTG
TTCATGATCGGAAAAGCACTTCGGGTGGATGTTTCTTTCTTGGGAATAATATTGTTTCATGGTTCAGTAAGAAACAAAATTGTGTATCTCTATCAACTGTAGAAGCGGAG
TATATAGCTGTAGGGAGTGGGTGTACTCAAATGTTATGGATGAAAAATATGTTGAATGAATATGGGATTATCCAAGATGTTATGACCTTATATTGTGATAATATGAGTGC
CATAGATATATCGAAAAATCCAGTCCAGCATAGTCGCACTAAGCACATTGATATAAGGCATCACTTTATTAGAGAACTCGTTGAAAATAAGGTTATTACATTACAACACA
TTCGCTCGAACTCACAATTGGCTGACATTTTCACTAAACCCCTTGATGCAACCACGTTTCAGCATTTGCATGCCTGTTTAAGAGTTTGGTAA
Protein sequenceShow/hide protein sequence
MIGSLLYLTACRPDIAYVVGICARYQSDPRTSHLNAVKRMIKYVHGTTDFGILYSYDTSFELVGYCVADWAGSVHDRKSTSGGCFFLGNNIVSWFSKKQNCVSLSTVEAE
YIAVGSGCTQMLWMKNMLNEYGIIQDVMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVITLQHIRSNSQLADIFTKPLDATTFQHLHACLRVW