; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0094871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0094871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:7876969..7878507
RNA-Seq ExpressionCmc04g0094871
SyntenyCmc04g0094871
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036853.1 pol protein [Cucumis melo var. makuwa]1.2e-29399.22Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPST+SEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL+KDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-28296.29Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKE+KVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFI+DILIY KTE EHEEHL MVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAGV VD AKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

KAA0048687.1 pol protein [Cucumis melo var. makuwa]5.1e-28496.68Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKE+KVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFI+DILIY KTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV VD AKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

TYJ95917.1 pol protein [Cucumis melo var. makuwa]1.2e-29399.22Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPST+SEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL+KDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

TYK01613.1 pol protein [Cucumis melo var. makuwa]2.5e-28396.48Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKE+KVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFI+DILIY KTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV VD AKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSF+ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

TrEMBL top hitse value%identityAlignment
A0A5A7T190 Reverse transcriptase6.1e-28396.29Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKE+KVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFI+DILIY KTE EHEEHL MVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAGV VD AKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

A0A5A7T1Q1 Reverse transcriptase5.9e-29499.22Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPST+SEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL+KDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

A0A5A7U330 Reverse transcriptase2.5e-28496.68Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKE+KVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFI+DILIY KTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV VD AKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSF+NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

A0A5D3B9W4 Reverse transcriptase5.9e-29499.22Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPST+SEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL+KDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

A0A5D3BPI1 Reverse transcriptase1.2e-28396.48Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP ELKE+KVQLQELLDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS+YGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFI+DILIY KTEAEHEEHL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV VD AKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSF+ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVTMQLA
        AVSVGAVTMQLA
Subjt:  AVSVGAVTMQLA

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.5e-8640.2Show/hide
Query:  KEMKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT
        +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV + +P+P +D++  +L     F+ IDL  G+HQ+ +    V KT
Subjt:  KEMKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT

Query:  AFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
        AF +K+GHYE++ M FGL NAPA F   MN + R  L+   +V+++DI+++  +  EH + L +V + L    L  +  KCEF  ++ +FLGHV++  G+
Subjt:  AFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV

Query:  FVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDS-FRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
          +  KIEA+  +  P+   E+++FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + +DAS   L
Subjt:  FVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDS-FRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADA
        G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L + +  K+ N +  RW   + ++DF+I Y  GK N VADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFEILYHPGKANVVADA

Query:  LSR
        LSR
Subjt:  LSR

P0CT34 Transposon Tf2-1 polyprotein2.4e-8237.28Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ M  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    NIYPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+ K+E+EH +H+  VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRN
        L++  L    +KCEF   QV F+G+ +S+ G       I+ V  W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+     +  N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHS
          T +    N R  RW   ++D++FEI Y PG AN +ADALSR V  +
Subjt:  FFTQKE--LNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHS

P0CT35 Transposon Tf2-2 polyprotein2.4e-8237.28Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ M  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    NIYPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+ K+E+EH +H+  VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRN
        L++  L    +KCEF   QV F+G+ +S+ G       I+ V  W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+     +  N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHS
          T +    N R  RW   ++D++FEI Y PG AN +ADALSR V  +
Subjt:  FFTQKE--LNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHS

P0CT41 Transposon Tf2-12 polyprotein2.4e-8237.28Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ M  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    NIYPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNIYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+ K+E+EH +H+  VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRN
        L++  L    +KCEF   QV F+G+ +S+ G       I+ V  W +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+     +  N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFRN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHS
          T +    N R  RW   ++D++FEI Y PG AN +ADALSR V  +
Subjt:  FFTQKE--LNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHS

P20825 Retrovirus-related Pol polyprotein from transposon 2973.5e-8639.09Show/hide
Query:  PISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSG
        PI    Y +A T   E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ + YP+P +D++  +L     F+ IDL  G
Subjt:  PISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSG

Query:  YHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLK
        +HQ+ + +  + KTAF +K GHYE++ M FGL NAPA F   MN + R  L+   +V+++DI+I+  +  EH   + +V   L D  L  +  KCEF  K
Subjt:  YHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLK

Query:  QVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSK-ACEDSFRNLKQKLVTAPVLTVPDGS
        + +FLGH+V+  G+  +  K++A+ S+  P+   E+R+FLGL GYYR+F+ N++ IA P+T   +K       K    ++F  LK  ++  P+L +PD  
Subjt:  QVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSK-ACEDSFRNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFE
          FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    KE   +  RW   + +Y F+
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDFE

Query:  ILYHPGKANVVADALSR
        I Y  GK N VADALSR
Subjt:  ILYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein6.1e-2543.51Show/hide
Query:  HLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GV  D AK+EA+  W  P   +E+R FLGL GYYRRFV+N+  I  PLT+L +K +   W
Subjt:  HLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVW

Query:  SKACEDSFRNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFRNLKQKLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTATCATCAGAACCAGTGGTAAGGGACTA
TCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCGTACAGAA
TGGCCCCAACAGAGTTGAAAGAAATGAAAGTGCAGTTACAGGAATTACTTGATAAGGGATTCATTCGACCGAGTGTGTCACCTTGGGGTGCCCCAGTTTTATTTGTTAAG
AAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACATATATCCCTTGCCCAGGATCGATGATCTGTTTGACCAGTTACA
GGGAGCTACAGTGTTCTCTAAGATTGATCTTCGATCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAAATACGGACACTATG
AGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTAAT
GATATCTTGATATATTACAAGACGGAGGCCGAGCATGAGGAGCATTTATGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTT
TTGGCTAAAGCAGGTGTCCTTTCTAGGCCATGTGGTGTCTAAGGCTGGAGTTTTTGTGGATCTAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCA
GTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGTCGGTTTGTGGAGAACTTTTCCCATATAGCTACTCCTCTTACTCAGTTGACCAGGAAAGGAGCTCCTTTT
GTTTGGAGCAAGGCATGTGAGGACAGTTTCAGAAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGA
TGCTTCCAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCATCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTAG
AGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAG
GAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTTTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAA
GGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCGTTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTATCATCAGAACCAGTGGTAAGGGACTA
TCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCGTACAGAA
TGGCCCCAACAGAGTTGAAAGAAATGAAAGTGCAGTTACAGGAATTACTTGATAAGGGATTCATTCGACCGAGTGTGTCACCTTGGGGTGCCCCAGTTTTATTTGTTAAG
AAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACATATATCCCTTGCCCAGGATCGATGATCTGTTTGACCAGTTACA
GGGAGCTACAGTGTTCTCTAAGATTGATCTTCGATCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAAATACGGACACTATG
AGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTAAT
GATATCTTGATATATTACAAGACGGAGGCCGAGCATGAGGAGCATTTATGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTT
TTGGCTAAAGCAGGTGTCCTTTCTAGGCCATGTGGTGTCTAAGGCTGGAGTTTTTGTGGATCTAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCA
GTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGTCGGTTTGTGGAGAACTTTTCCCATATAGCTACTCCTCTTACTCAGTTGACCAGGAAAGGAGCTCCTTTT
GTTTGGAGCAAGGCATGTGAGGACAGTTTCAGAAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGA
TGCTTCCAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCATCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTAG
AGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAG
GAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTTTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAA
GGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCGTTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCTAG
Protein sequenceShow/hide protein sequence
MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRELNKVTVKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIN
DILIYYKTEAEHEEHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDLAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPF
VWSKACEDSFRNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
ELNMRQRRWLELVKDYDFEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA