| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033543.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.2e-69 | 89.4 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDY KMVADLCY STIEPST DSA K+EYWLNAMQE+LLQFRRNNVWTLVSKPEGVNVIG KWVFKNKTDE CVTKNKARLVAQGY QV+G
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I F+ETFAPVA+LEAIRLLLGISCIQK KLYQMDVKSAFLNGYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| KAA0066164.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.5e-71 | 90.73 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYMKMVADLCYIST+EPST DSA +DEYWLNAMQEELLQFR+NNVWTLVSKPEGVNVIG KWVFKNKTDE GCVTKNKA+LVAQGYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETFA VA+LEAIRLLLGISCIQK KLYQMDVKSAFL+GYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| KAA0066255.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.2e-69 | 89.4 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYM MVADLCYIST EPST D A +DEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIG KWVFKNKTDE GCV K KARLVAQGYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETFAPVA++EAIRLLLGISCIQK KLYQMDVKSAFLNGYLN VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| TYJ98791.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.2e-69 | 89.4 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYMKMVADLCYIST EPST D + +DEY LNAMQEELLQF+RNNVWTLV KPEGVNVIG KWVFKNKTDE GCVTKNKARLVAQGYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETF+PVA+LEAIRLLLGISCIQK KLYQMDVKSAFLNGYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| TYK13607.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.6e-68 | 90.07 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYMKMV DLCY STIEPST DSA KDEYWLNAMQEELLQFR+NNVWTLVSKPE VNVIG K VFKNKT EVGCVTKNKARLVAQGYTQV+G
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETFAPVA LEAIRLLLGISCIQK KLYQMDVKS FLNGYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3B9N4 Gag-pol polyprotein | 2.0e-69 | 89.4 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDY KMVADLCY STIEPST DSA K+EYWLNAMQE+LLQFRRNNVWTLVSKPEGVNVIG KWVFKNKTDE CVTKNKARLVAQGY QV+G
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I F+ETFAPVA+LEAIRLLLGISCIQK KLYQMDVKSAFLNGYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| A0A5D3BEV2 Gag-pol polyprotein | 1.6e-69 | 89.4 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYM MVADLCYIST EPST D A +DEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIG KWVFKNKTDE GCV K KARLVAQGYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETFAPVA++EAIRLLLGISCIQK KLYQMDVKSAFLNGYLN VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| A0A5D3BJA9 Gag-pol polyprotein | 1.6e-69 | 89.4 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYMKMVADLCYIST EPST D + +DEY LNAMQEELLQF+RNNVWTLV KPEGVNVIG KWVFKNKTDE GCVTKNKARLVAQGYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETF+PVA+LEAIRLLLGISCIQK KLYQMDVKSAFLNGYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| A0A5D3CNZ6 Gag-pol polyprotein | 7.8e-69 | 90.07 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYMKMV DLCY STIEPST DSA KDEYWLNAMQEELLQFR+NNVWTLVSKPE VNVIG K VFKNKT EVGCVTKNKARLVAQGYTQV+G
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETFAPVA LEAIRLLLGISCIQK KLYQMDVKS FLNGYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| A0A5D3CXU0 Gag-pol polyprotein | 1.7e-71 | 90.73 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
MQTRRKEKIDYMKMVADLCYIST+EPST DSA +DEYWLNAMQEELLQFR+NNVWTLVSKPEGVNVIG KWVFKNKTDE GCVTKNKA+LVAQGYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTIEPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEG
Query: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
I FDETFA VA+LEAIRLLLGISCIQK KLYQMDVKSAFL+GYLNE VYVA
Subjt: IYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.1e-22 | 45.13 | Show/hide |
Query: WLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKS
W A+ EL + NN WT+ +PE N++ +WVF K +E+G + KARLVA+G+TQ I ++ETFAPVA++ + R +L + LK++QMDVK+
Subjt: WLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGISCIQKLKLYQMDVKS
Query: AFLNGYLNEVVYV
AFLNG L E +Y+
Subjt: AFLNGYLNEVVYV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-19 | 40.83 | Show/hide |
Query: SAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGISCIQKLKL
S P+ + AMQEE+ ++N + LV P+G + KWVFK K D + + KARLV +G+ Q +GI FDE F+PV ++ +IR +L ++ L++
Subjt: SAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGISCIQKLKL
Query: YQMDVKSAFLNGYLNEVVYV
Q+DVK+AFL+G L E +Y+
Subjt: YQMDVKSAFLNGYLNEVVYV
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.9e-20 | 43.28 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTI--EPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQV
M TR K I+ + L +TI EP + A KD W AMQEEL RN W LV P N++G KWVFK K G + + KARLVA+G+ Q
Subjt: MQTRRKEKIDYMKMVADLCYISTI--EPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQV
Query: EGIYFDETFAPVAQLEAIRLLLGISCIQKLKLYQ
EGIYF ET++PV + IR +L ++ Q+L++ Q
Subjt: EGIYFDETFAPVAQLEAIRLLLGISCIQKLKLYQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.9e-21 | 40.62 | Show/hide |
Query: EPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEG-VNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGIS
EP T A KDE W NAM E+ N+ W LV P V ++G +W+F K + G + + KARLVA+GY Q G+ + ETF+PV + +IR++LG++
Subjt: EPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLVSKPEG-VNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGIS
Query: CIQKLKLYQMDVKSAFLNGYLNEVVYVA
+ + Q+DV +AFL G L + VY++
Subjt: CIQKLKLYQMDVKSAFLNGYLNEVVYVA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.4e-20 | 39.06 | Show/hide |
Query: EPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLV-SKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGIS
EP T A KD+ W AM E+ N+ W LV P V ++G +W+F K + G + + KARLVA+GY Q G+ + ETF+PV + +IR++LG++
Subjt: EPSTTDSAPKDEYWLNAMQEELLQFRRNNVWTLV-SKPEGVNVIGIKWVFKNKTDEVGCVTKNKARLVAQGYTQVEGIYFDETFAPVAQLEAIRLLLGIS
Query: CIQKLKLYQMDVKSAFLNGYLNEVVYVA
+ + Q+DV +AFL G L + VY++
Subjt: CIQKLKLYQMDVKSAFLNGYLNEVVYVA
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