| GenBank top hits | e value | %identity | Alignment |
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| KAA0031444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.5e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| KAA0036801.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.0e-114 | 92.83 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSHEPLNFEEASQNDKWKI
ETEEL+ + + +N+K ++
Subjt: ETEELSHEPLNFEEASQNDKWKI
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| KAA0047979.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.5e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| TYK03241.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.5e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| TYK22149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.5e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SJX6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| A0A5A7UNW6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| A0A5A7V308 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| A0A5A7V3X9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-110 | 82.07 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MT+PFTPQQNGVVERKNRTIL M R+MLK KK+ KEFWAQ VECAVYLSN SPTRSLWNKTPQQAWTGRKPSI HLRVFGCM YAHIPDQK KLDDKS+
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNP+TKK +VSRDVVF +EAS NWNDEPEDYKFL FP++HDEPSDIA S P SPITPQQSTSSSSASSSEGPRGMRSL+DIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
ETEELS EPLNFEEASQNDKWKIAMDEEI+AIK+NDT
Subjt: ETEELSH--------------EPLNFEEASQNDKWKIAMDEEIRAIKRNDT
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| A0A5D3BA28 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-114 | 92.83 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSD
Query: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Subjt: KYVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYD
Query: ETEELSHEPLNFEEASQNDKWKI
ETEEL+ + + +N+K ++
Subjt: ETEELSHEPLNFEEASQNDKWKI
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.9e-27 | 47.37 | Show/hide |
Query: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSL--WNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDK
+T+P TPQ NGV ER RTI R M+ KL K FW + V A YL N P+R+L +KTP + W +KP + HLRVFG +Y HI + K K DDK
Subjt: MTIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSL--WNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDK
Query: SDKYVFVGYDASSKGYKLYNPITKKMMVSRDVV
S K +FVGY+ + G+KL++ + +K +V+RDVV
Subjt: SDKYVFVGYDASSKGYKLYNPITKKMMVSRDVV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.2e-34 | 39.81 | Show/hide |
Query: TIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSDK
T+P TPQ NGV ER NRTI+ VR+ML+ KL K FW + V+ A YL N SP+ L + P++ WT ++ S +HL+VFGC +AH+P ++ KLDDKS
Subjt: TIPFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSDK
Query: YVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYDE
+F+GY GY+L++P+ KK++ SRDVVF + D E K + PN P ST +P T +ST+ + E P + + DE
Subjt: YVFVGYDASSKGYKLYNPITKKMMVSRDVVFGKEASGNWNDEPEDYKFLLFPNDHDEPSDIASLSTPPSPITPQQSTSSSSASSSEGPRGMRSLRDIYDE
Query: TEELSHEPLNFEEASQ
E P EE Q
Subjt: TEELSHEPLNFEEASQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.7e-17 | 37.21 | Show/hide |
Query: PFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSDKYV
P TP+ NG+ ERK+R I+ +L + K +W AVYL N PT L ++P Q G P+ LRVFGC Y + KLDDKS + V
Subjt: PFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSDKYV
Query: FVGYDASSKGYKLYNPITKKMMVSRDVVF
F+GY + Y + T ++ +SR V F
Subjt: FVGYDASSKGYKLYNPITKKMMVSRDVVF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-16 | 35.66 | Show/hide |
Query: PFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSDKYV
P TP+ NG+ ERK+R I+ M +L + K +W AVYL N PT L ++P Q G+ P+ L+VFGC Y + KL+DKS +
Subjt: PFTPQQNGVVERKNRTILYMVRNMLKSKKLSKEFWAQVVECAVYLSNHSPTRSLWNKTPQQAWTGRKPSIAHLRVFGCMIYAHIPDQKHCKLDDKSDKYV
Query: FVGYDASSKGYKLYNPITKKMMVSRDVVF
F+GY + Y + T ++ SR V F
Subjt: FVGYDASSKGYKLYNPITKKMMVSRDVVF
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