| GenBank top hits | e value | %identity | Alignment |
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| KAA0033486.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.3e-49 | 78.12 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEF+VMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +A+HE HLH
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEFLLRWCLFL
QVLE RANKLYAKFSKCEF LR FL
Subjt: QVLEIFRANKLYAKFSKCEFLLRWCLFL
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| KAA0048134.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.6e-49 | 76.34 | Show/hide |
Query: MILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHEN
++ RIDDLF+QLQGA +FSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSKI+A+HE
Subjt: MILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHEN
Query: HLHQVLEIFRANKLYAKFSKCEFLLRWCLFL
HLHQVLE RANKLYAKFSKCEF L+ FL
Subjt: HLHQVLEIFRANKLYAKFSKCEFLLRWCLFL
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| KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.9e-49 | 78.91 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNALA+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +A+HE HLH
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEFLLRWCLFL
QVLE RANKLYAKFSKCEF L+ FL
Subjt: QVLEIFRANKLYAKFSKCEFLLRWCLFL
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| TYK04344.1 reverse transcriptase [Cucumis melo var. makuwa] | 4.3e-49 | 78.91 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +AKHE HLH
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEFLLRWCLFL
QVLE RANKLYAKFSKCEF L+ FL
Subjt: QVLEIFRANKLYAKFSKCEFLLRWCLFL
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| TYK18480.1 pol protein [Cucumis melo var. makuwa] | 1.9e-49 | 78.46 | Show/hide |
Query: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
+LRIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +A+HE H
Subjt: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
Query: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
LHQVLE RANKLYAKFSKCEF LR FL
Subjt: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TYM4 Ty3-gypsy retrotransposon protein | 2.7e-49 | 76.34 | Show/hide |
Query: MILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHEN
++ RIDDLF+QLQGA +FSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSKI+A+HE
Subjt: MILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHEN
Query: HLHQVLEIFRANKLYAKFSKCEFLLRWCLFL
HLHQVLE RANKLYAKFSKCEF L+ FL
Subjt: HLHQVLEIFRANKLYAKFSKCEFLLRWCLFL
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| A0A5A7VBY3 Reverse transcriptase | 3.5e-49 | 78.12 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEF+VMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +A+HE HLH
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEFLLRWCLFL
QVLE RANKLYAKFSKCEF LR FL
Subjt: QVLEIFRANKLYAKFSKCEFLLRWCLFL
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| A0A5A7VK60 Reverse transcriptase | 9.3e-50 | 78.91 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNALA+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +A+HE HLH
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEFLLRWCLFL
QVLE RANKLYAKFSKCEF L+ FL
Subjt: QVLEIFRANKLYAKFSKCEFLLRWCLFL
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| A0A5D3BZD2 Reverse transcriptase | 2.1e-49 | 78.91 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +AKHE HLH
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEFLLRWCLFL
QVLE RANKLYAKFSKCEF L+ FL
Subjt: QVLEIFRANKLYAKFSKCEFLLRWCLFL
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| A0A5D3D4M7 Pol protein | 9.3e-50 | 78.46 | Show/hide |
Query: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
+LRIDDLF+QLQGA VFSKIDL SGYHQLRI+DS+IPKTAFRSRYGHYEFIVMSFGLTNA A+ +D+ NRVFKDF ++FVI+FI+DIL+YSK +A+HE H
Subjt: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
Query: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
LHQVLE RANKLYAKFSKCEF LR FL
Subjt: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.2e-14 | 33.08 | Show/hide |
Query: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
I +D++ +L F+ IDL G+HQ+ + ++ KTAF +++GHYE++ M FGL NA A N + + N +++++DI+V+S +H
Subjt: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
Query: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
L V E L + KCEFL + FL
Subjt: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 7.2e-15 | 32.31 | Show/hide |
Query: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
I +D++ +L F+ IDL G+HQ+ + + +I KTAF ++ GHYE++ M FGL NA A N + + N +++++DI+++S +H N
Subjt: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENH
Query: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
+ V L + KCEFL + FL
Subjt: LHQVLEIFRANKLYAKFSKCEFLLRWCLFL
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| P31843 RNA-directed DNA polymerase homolog | 9.0e-18 | 44.95 | Show/hide |
Query: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILV---YSKIKAKH
I R+DDLF++L A F+K+DL SGY Q+RI + PKT +RYG +EF VM FGLTNALA ++ N V ++ + FV+++++D++V YS +H
Subjt: ILRIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILV---YSKIKAKH
Query: ENHLHQVLE
HL V E
Subjt: ENHLHQVLE
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.1e-15 | 38.33 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RID+L +++ A +F+ +DL SGYHQ+ ++ + KTAF + G YE+ VM FGL NA + F+D FV ++++DIL++S+ +H HL
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEF
VLE + L K KC+F
Subjt: QVLEIFRANKLYAKFSKCEF
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.1e-15 | 38.33 | Show/hide |
Query: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
RID+L +++ A +F+ +DL SGYHQ+ ++ + KTAF + G YE+ VM FGL NA + F+D FV ++++DIL++S+ +H HL
Subjt: RIDDLFNQLQGAIVFSKIDLCSGYHQLRIKDSNIPKTAFRSRYGHYEFIVMSFGLTNALAIIIDMTNRVFKDFFNTFVIIFINDILVYSKIKAKHENHLH
Query: QVLEIFRANKLYAKFSKCEF
VLE + L K KC+F
Subjt: QVLEIFRANKLYAKFSKCEF
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