| GenBank top hits | e value | %identity | Alignment |
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| KAA0051719.1 pol protein [Cucumis melo var. makuwa] | 3.2e-67 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTR+G PFVWSPTCESSFQ LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| KAA0054634.1 pol protein [Cucumis melo var. makuwa] | 1.9e-67 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTRKG PFVWSP CESSFQ+LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| KAA0058812.1 pol protein [Cucumis melo var. makuwa] | 3.2e-67 | 79.07 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDF+D+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTRKG PFVWSP CESSFQ+LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| KAA0066951.1 pol protein [Cucumis melo var. makuwa] | 1.9e-67 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTRKG PFVWSP CESSFQ+LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| TYK01306.1 pol protein [Cucumis melo var. makuwa] | 3.2e-67 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTR+G PFVWSPTCESSFQ LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7UE01 Reverse transcriptase | 1.5e-67 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTR+G PFVWSPTCESSFQ LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| A0A5A7UHL7 Reverse transcriptase | 9.0e-68 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTRKG PFVWSP CESSFQ+LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| A0A5A7USG7 Reverse transcriptase | 1.5e-67 | 79.07 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDF+D+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTRKG PFVWSP CESSFQ+LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| A0A5A7VMR4 Reverse transcriptase | 9.0e-68 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTRKG PFVWSP CESSFQ+LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| A0A5D3BSV9 Reverse transcriptase | 1.5e-67 | 79.65 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGLTNAP+VFMDLMNRVFKDFLD+FVIVFIDD L+YSKTEA HEEHL QVL+ LRANKLYAKFSK +SSEGVSVDPAKIEAVT+W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
PRPSTVSE+ SFLGLA YYRRFVEDFSRIASPLTQLTR+G PFVWSPTCESSFQ LK+KLVTA VLT+PD S
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVLTMPDES
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.7e-18 | 31.58 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M FGL NAP+ F MN + + L+ +V++DD +V+S + H + L V + L L + K L+ +G+ +P KIEA+ +
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPF-VWSPTCESSFQDLKRKLVTALVLTMPD
P P+ E+ +FLGL YYR+F+ +F+ IA P+T+ +K +P +S+F+ LK + +L +PD
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPF-VWSPTCESSFQDLKRKLVTALVLTMPD
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| P0CT41 Transposon Tf2-12 polyprotein | 5.9e-16 | 27.71 | Show/hide |
Query: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
M +G++ AP+ F +N + + ++ V+ ++DD L++SK+E+ H +H+ VL L+ L +K +S +G + I+ V W
Subjt: MFFGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSW
Query: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVL
+P E+ FLG Y R+F+ S++ PL L +K + W+PT + +++K+ LV+ VL
Subjt: PRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVWSPTCESSFQDLKRKLVTALVL
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.1e-19 | 31.67 | Show/hide |
Query: FGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDIL-----RANKLYAKFSK---------LSSEGVSVDPAKIEAVTSWPR
FGL NA S+F ++ V ++ + V++DD +++S+ E+ H H+ VL L R ++ +F K +S +G DP K++A+ +P
Subjt: FGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDIL-----RANKLYAKFSK---------LSSEGVSVDPAKIEAVTSWPR
Query: PSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTR-----------KGAPFVWSPTCESSFQDLKRKLVTA-LVLTMPD
P V +V SFLGLA YYR F++DF+ IA P+T + + K P ++ T ++FQ L+ L + ++L PD
Subjt: PSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTR-----------KGAPFVWSPTCESSFQDLKRKLVTA-LVLTMPD
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| P92523 Uncharacterized mitochondrial protein AtMg00860 | 1.8e-17 | 38.4 | Show/hide |
Query: HLPQVLDILRANKLYAKFSK----------------LSSEGVSVDPAKIEAVTSWPRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVW
HL VL I ++ YA K +S EGVS DPAK+EA+ WP P +E+ FLGL YYRRFV+++ +I PLT+L +K + W
Subjt: HLPQVLDILRANKLYAKFSK----------------LSSEGVSVDPAKIEAVTSWPRPSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTRKGAPFVW
Query: SPTCESSFQDLKRKLVTALVLTMPD
+ +F+ LK + T VL +PD
Subjt: SPTCESSFQDLKRKLVTALVLTMPD
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.4e-20 | 30.34 | Show/hide |
Query: FGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSWPR
FGL NAP++F +++ + ++ + V+IDD +V+S+ H ++L VL L L K ++++G+ DP K+ A++ P
Subjt: FGLTNAPSVFMDLMNRVFKDFLDTFVIVFIDDTLVYSKTEAGHEEHLPQVLDILRANKLYAKFSK--------------LSSEGVSVDPAKIEAVTSWPR
Query: PSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTR-----------KGAPFVWSPTCESSFQDLKRKLVTALVLTMP
P++V E+ FLG+ YYR+F++D++++A PLT LTR P T SF DLK L ++ +L P
Subjt: PSTVSEVHSFLGLAEYYRRFVEDFSRIASPLTQLTR-----------KGAPFVWSPTCESSFQDLKRKLVTALVLTMP
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