CuGenDBv2

Gene ID	Cmc04g0095461
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:8797479..8798544
RNA-Seq Expression	Cmc04g0095461
Synteny	Cmc04g0095461
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041588 - Integrase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025917.1 pol protein [Cucumis melo var. makuwa]

5.9e-196

99.41

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTKTAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

1.8e-192

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

KAA0050760.1 pol protein [Cucumis melo var. makuwa]

1.8e-192

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK01576.1 pol protein [Cucumis melo var. makuwa]

1.8e-192

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK20443.1 pol protein [Cucumis melo var. makuwa]

1.8e-192

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

8.6e-193

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7TP01 Reverse transcriptase

2.9e-196

99.41

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTKTAHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7U6G5 Reverse transcriptase

8.6e-193

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3BTN0 Reverse transcriptase

8.6e-193

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3C6W3 Reverse transcriptase

8.6e-193

96.74

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        MHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTY
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG
        TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVG

Query:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        PFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  PFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.0e-49

34.02

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF
           M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF

Query:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT35 Transposon Tf2-2 polyprotein

1.0e-49

34.02

Show/hide

Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF
           M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF

Query:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT36 Transposon Tf2-3 polyprotein

1.0e-49

34.02

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Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF
           M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF

Query:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT41 Transposon Tf2-12 polyprotein

1.0e-49

34.02

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Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF
           M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF

Query:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

Q9UR07 Transposon Tf2-11 polyprotein

1.0e-49

34.02

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Query:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY
        +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTY

Query:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA
        TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +
Subjt:  TASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF
           M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRF

Query:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGTTCGTCAGTAGGTGCTTGGTGTGCCAGCA
GGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGACTTTATCACGGGACTGCCCAAGACCA
TGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACACTGCCAGCAAGTGGGGGCAGTTATACATG
ACGGAAATAGTAAGACTGCACGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAGGGCTCCAACTTGCATTAGGTACGAGGCT
GGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCCTGTGTGCTAGAGTTTTCAGGAAGTTGGG
ACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCTACCATTGGTATGGCTCCGTTTGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGC
TGGGGCGAGGTCGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACCGCACAAAGCAGACAGAA
GAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTTTGAAGGTAGCACCGATGAAGGGCGTTCTGAGGTTCGAGAAGAAGGGGAAGT
TGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGATTGGCCCTGTGGCTTATCGTTTGGCCTTGCCCCCATCCCTCTCAGCAGTGCATGACGTATTCCATGTC
TCCATGTTGAGGAGGTCAGTGAGAACTTGA

mRNA sequence

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Protein sequence

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MHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYM
TEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
WGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
SMLRRSVRT

Cmc04g0095461 (gene) of Melon (Charmono) v1.1 genome