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Cmc04g0095561 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0095561
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr04:9155631..9156152
RNA-Seq ExpressionCmc04g0095561
SyntenyCmc04g0095561
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034862.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]5.7e-7885.55Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VF KI+LK GYHQIRMVDEDIEKT  RTH+GHYEFLVM FGLTNAPATFQALMNTIFKPF RKFVLVFFDDIL+YS++ +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FAQ KVEYLGHIISGEGVEVD +KIKSITKWPKPTNIKEVRGF  LTRYYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

KAA0064684.1 tetratricopeptide repeat protein SKI3 [Cucumis melo var. makuwa]3.4e-8390.17Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VFSKI+LK  YHQIRMV++DIEKT FRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKN +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FAQQKVEYLGHI+SGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLT YYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

KAA0065702.1 peroxidase 64 [Cucumis melo var. makuwa]3.2e-8187.86Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VF KI+LKSGYHQIRMV EDIEKT FRTHEGHYEFLVMPFGLTNAPATFQALMNTI KPFLRKFVLVFFDDILIY+KN +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREH+LY NKKKC+FAQQK EYLGHIISGEGVE DP+KIKSITKWPKPTNIKE+RGFLGLT YYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

TYJ96674.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]5.7e-7885.55Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VF KI+LK GYHQIRMVDEDIEKT  RTH+GHYEFLVM FGLTNAPATFQALMNTIFKPF RKFVLVFFDDIL+YS++ +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FAQ KVEYLGHIISGEGVEVD +KIKSITKWPKPTNIKEVRGF  LTRYYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

TYK14999.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.0e-8491.33Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VFSKI+LKSGYHQIRMVDEDIEKT FRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKN +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FA+QKVEYLGHIISGEGVEVD EKIKSITKWPKP NIKEVRGFLGLT YYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

TrEMBL top hitse value%identityAlignment
A0A5A7SUI3 Transposon Tf2-9 polyprotein2.8e-7885.55Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VF KI+LK GYHQIRMVDEDIEKT  RTH+GHYEFLVM FGLTNAPATFQALMNTIFKPF RKFVLVFFDDIL+YS++ +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FAQ KVEYLGHIISGEGVEVD +KIKSITKWPKPTNIKEVRGF  LTRYYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

A0A5A7VBN0 Peroxidase 641.6e-8187.86Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VF KI+LKSGYHQIRMV EDIEKT FRTHEGHYEFLVMPFGLTNAPATFQALMNTI KPFLRKFVLVFFDDILIY+KN +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREH+LY NKKKC+FAQQK EYLGHIISGEGVE DP+KIKSITKWPKPTNIKE+RGFLGLT YYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

A0A5A7VBR1 Tetratricopeptide repeat protein SKI31.7e-8390.17Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VFSKI+LK  YHQIRMV++DIEKT FRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKN +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FAQQKVEYLGHI+SGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLT YYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

A0A5D3BCG7 Transposon Tf2-9 polyprotein2.8e-7885.55Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VF KI+LK GYHQIRMVDEDIEKT  RTH+GHYEFLVM FGLTNAPATFQALMNTIFKPF RKFVLVFFDDIL+YS++ +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FAQ KVEYLGHIISGEGVEVD +KIKSITKWPKPTNIKEVRGF  LTRYYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

A0A5D3CXQ2 Ty3/gypsy retrotransposon protein3.4e-8491.33Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        +VEELFDELS A VFSKI+LKSGYHQIRMVDEDIEKT FRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKN +DH EHMR
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        KVLSVLREHELY NKKKC+FA+QKVEYLGHIISGEGVEVD EKIKSITKWPKP NIKEVRGFLGLT YYR FV
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.7e-4044.77Show/hide
Query:  VEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRK
        ++E+  +L     F+ I+L  G+HQI M  E + KT F T  GHYE+L MPFGL NAPATFQ  MN I +P L K  LV+ DDI+++S ++ +H + +  
Subjt:  VEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRK

Query:  VLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        V   L +  L L   KC F +Q+  +LGH+++ +G++ +PEKI++I K+P PT  KE++ FLGLT YYR F+
Subjt:  VLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

P0CT41 Transposon Tf2-12 polyprotein7.6e-3339.88Show/hide
Query:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR
        ++E+L  ++  +T+F+K++LKS YH IR+   D  K  FR   G +E+LVMP+G++ APA FQ  +NTI        V+ + DDILI+SK+  +H +H++
Subjt:  MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMR

Query:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
         VL  L+   L +N+ KC F Q +V+++G+ IS +G     E I  + +W +P N KE+R FLG   Y R F+
Subjt:  KVLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

P10401 Retrovirus-related Pol polyprotein from transposon gypsy1.8e-3441.82Show/hide
Query:  LSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRKVLSVLRE
        L +A  F+ ++LKSGYHQI + + D EKT+F  + G YEF  +PFGL NA + FQ  ++ + +  + K   V+ DD++I+S+N  DH  H+  VL  L +
Subjt:  LSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRKVLSVLRE

Query:  HELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
          + ++++K  F ++ VEYLG I+S +G + DPEK+K+I ++P+P  + +VR FLGL  YYR F+
Subjt:  HELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

P20825 Retrovirus-related Pol polyprotein from transposon 2977.6e-4145.35Show/hide
Query:  VEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRK
        ++E+  +L +   F+ I+L  G+HQI M +E I KT F T  GHYE+L MPFGL NAPATFQ  MN I +P L K  LV+ DDI+I+S ++ +H   ++ 
Subjt:  VEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRK

Query:  VLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        V + L +  L L   KC F +++  +LGHI++ +G++ +P K+K+I  +P PT  KE+R FLGLT YYR F+
Subjt:  VLSVLREHELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus6.6e-3742.42Show/hide
Query:  LSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRKVLSVLRE
        L  A  F+ ++L SG+HQI M + DI KT F T  G YEFL +PFGL NAPA FQ +++ I +  + K   V+ DDI+++S++   H +++R VL+ L +
Subjt:  LSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRKVLSVLRE

Query:  HELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
          L +N +K +F   +VE+LG+I++ +G++ DP+K+++I++ P PT++KE++ FLG+T YYR F+
Subjt:  HELYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.8e-2053.85Show/hide
Query:  HMRKVLSVLREHELYLNKKKCNFAQQKVEYLG--HIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV
        H+  VL +  +H+ Y N+KKC F Q ++ YLG  HIISGEGV  DP K++++  WP+P N  E+RGFLGLT YYR FV
Subjt:  HMRKVLSVLREHELYLNKKKCNFAQQKVEYLG--HIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGGAATTATTTGATGAATTAAGCGAAGCAACTGTGTTCTCCAAAATCAACTTAAAGTCAGGGTATCACCAAATTAGAATGGTGGATGAGGACATTGAAAAAAC
GACTTTTAGAACTCACGAAGGCCATTATGAATTCTTAGTCATGCCGTTTGGGCTAACTAACGCACCAGCCACCTTTCAAGCGTTGATGAATACAATATTTAAGCCCTTCC
TAAGAAAATTTGTATTAGTATTCTTTGACGACATACTCATCTACAGCAAAAATATAATCGATCACGAGGAACATATGAGAAAGGTGTTGTCCGTACTAAGAGAACATGAG
CTATACCTGAACAAGAAGAAATGCAATTTTGCTCAACAAAAAGTGGAATACTTAGGTCATATTATATCCGGAGAAGGAGTTGAAGTAGACCCAGAGAAGATCAAGTCGAT
TACTAAATGGCCAAAACCTACGAACATCAAAGAAGTTAGAGGCTTTTTGGGACTCACAAGGTATTATCGACATTTTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGGAATTATTTGATGAATTAAGCGAAGCAACTGTGTTCTCCAAAATCAACTTAAAGTCAGGGTATCACCAAATTAGAATGGTGGATGAGGACATTGAAAAAAC
GACTTTTAGAACTCACGAAGGCCATTATGAATTCTTAGTCATGCCGTTTGGGCTAACTAACGCACCAGCCACCTTTCAAGCGTTGATGAATACAATATTTAAGCCCTTCC
TAAGAAAATTTGTATTAGTATTCTTTGACGACATACTCATCTACAGCAAAAATATAATCGATCACGAGGAACATATGAGAAAGGTGTTGTCCGTACTAAGAGAACATGAG
CTATACCTGAACAAGAAGAAATGCAATTTTGCTCAACAAAAAGTGGAATACTTAGGTCATATTATATCCGGAGAAGGAGTTGAAGTAGACCCAGAGAAGATCAAGTCGAT
TACTAAATGGCCAAAACCTACGAACATCAAAGAAGTTAGAGGCTTTTTGGGACTCACAAGGTATTATCGACATTTTGTATAG
Protein sequenceShow/hide protein sequence
MVEELFDELSEATVFSKINLKSGYHQIRMVDEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNIIDHEEHMRKVLSVLREHE
LYLNKKKCNFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKPTNIKEVRGFLGLTRYYRHFV