CuGenDBv2

Gene ID	Cmc04g0095781
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:9501235..9503457
RNA-Seq Expression	Cmc04g0095781
Synteny	Cmc04g0095781
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0000502 - proteasome complex (cellular component) GO:0016887 - ATPase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025848.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

KAA0031437.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

KAA0033825.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

TYK28368.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

TYK28422.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEQ2 Reverse transcriptase

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5A7TSL0 Reverse transcriptase

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5A7UBS1 Reverse transcriptase

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5D3CQB5 Reverse transcriptase

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

A0A5D3DY07 Reverse transcriptase

0.0e+00

96.51

Show/hide

Query:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
        MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF
Subjt:  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF

Query:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
        LGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP
Subjt:  LGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP

Query:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE
        THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL+              PLLRDFERAE
Subjt:  THDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALN--------------PLLRDFERAE

Query:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
        IAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
Subjt:  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
        VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV
Subjt:  VYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
        RLHGVPVSIISDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Subjt:  RLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC

Query:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
        CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
Subjt:  CRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTS
        LALPPSFAA   ++  S
Subjt:  LALPPSFAATQHMWWTS

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

6.8e-104

32.41

Show/hide

Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L KK   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADAL+ ++ + E          +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV

Query:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
           + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S D      ++ +P D+ +   ++ + H     +HPG   +   +   +
Subjt:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY

Query:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL
         W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++  
Subjt:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL

Query:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC
         G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++     
Subjt:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC

Query:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
         SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y 
Subjt:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTSSH
        L LP S    +HM+ ++ H
Subjt:  LALPPSFAATQHMWWTSSH

P0CT35 Transposon Tf2-2 polyprotein

6.8e-104

32.41

Show/hide

Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L KK   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADAL+ ++ + E          +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV

Query:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
           + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S D      ++ +P D+ +   ++ + H     +HPG   +   +   +
Subjt:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY

Query:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL
         W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++  
Subjt:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL

Query:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC
         G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++     
Subjt:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC

Query:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
         SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y 
Subjt:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTSSH
        L LP S    +HM+ ++ H
Subjt:  LALPPSFAATQHMWWTSSH

P0CT36 Transposon Tf2-3 polyprotein

6.8e-104

32.41

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Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L KK   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADAL+ ++ + E          +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV

Query:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
           + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S D      ++ +P D+ +   ++ + H     +HPG   +   +   +
Subjt:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY

Query:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL
         W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++  
Subjt:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL

Query:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC
         G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++     
Subjt:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC

Query:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
         SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y 
Subjt:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTSSH
        L LP S    +HM+ ++ H
Subjt:  LALPPSFAATQHMWWTSSH

P0CT37 Transposon Tf2-4 polyprotein

6.8e-104

32.41

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Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L KK   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADAL+ ++ + E          +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV

Query:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
           + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S D      ++ +P D+ +   ++ + H     +HPG   +   +   +
Subjt:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY

Query:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL
         W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++  
Subjt:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL

Query:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC
         G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++     
Subjt:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC

Query:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
         SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y 
Subjt:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTSSH
        L LP S    +HM+ ++ H
Subjt:  LALPPSFAATQHMWWTSSH

P0CT41 Transposon Tf2-12 polyprotein

6.8e-104

32.41

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Query:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL
        +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG 
Subjt:  MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGL

Query:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN
          Y R+F+   S++  PL  L KK   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Subjt:  AGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKIHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV
        Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADAL+ ++ + E          +
Subjt:  YPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEV

Query:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY
           + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S D      ++ +P D+ +   ++ + H     +HPG   +   +   +
Subjt:  TAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVY

Query:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL
         W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++  
Subjt:  WWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRL

Query:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC
         G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++     
Subjt:  HGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCC

Query:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR
         SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y 
Subjt:  RSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYR

Query:  LALPPSFAATQHMWWTSSH
        L LP S    +HM+ ++ H
Subjt:  LALPPSFAATQHMWWTSSH

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

4.5e-26

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Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P   +E+R FLGL GYYRRFV+++ +I  PLT+L KK +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVW

Query:  SPACERSFQELKQKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACERSFQELKQKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAG
CACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTT
TCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGT
TACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGC
TTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGT
TGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTC
TTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATG
AGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAACCCCTTACTCAGG
GACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAG
CTGAATGATCCTTATTTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAAGGACGCCTG
TGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGG
AGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGATTG
TTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTCGTG
GTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGA
GTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAAATTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTC
CACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTAGAAGACATGCTGCGAGCCTGCGTATTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCAT
CTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAG
GTTGGAGAGCAGAGGATGCTAGGCCCCGAATTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGT
TACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCAAAGAAGGGGAAG
CTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAACCCAACACATGTGG
TGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAG
YYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVV
FALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALNPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ
LNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGL
LQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQIALGTRLDFSTAF
HPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKS
YADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSHCRLARI

Cmc04g0095781 (gene) of Melon (Charmono) v1.1 genome