| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032875.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.0e-113 | 93.78 | Show/hide |
Query: GRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVV
GRKPSLRHLHVWGCQAEV+IYNPHEKKLDSRTTS FFI YPEKSKGYRFYC NHSTRIVE GNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVV
Subjt: GRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVV
Query: VPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMND
VPVVV SVNNPQEQQIN+QTPHNDIVTNEPVTEGP EIELRRSVRSRRSA SDDYLVYLHESEFDLSID +PVSFSQAIK DNST WLDAMKEELKSMND
Subjt: VPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMND
Query: NEVWDLVELPKESKRVECKWVFKTK
NEVWDLVELPKESKRV CKWVFKTK
Subjt: NEVWDLVELPKESKRVECKWVFKTK
|
|
| KAA0035715.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.7e-124 | 91.7 | Show/hide |
Query: MYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDII
MYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTS FFI YPEKSKGYRFYC HSTRIVETGNVRFIENDI
Subjt: MYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDII
Query: SGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEP
SGSLEP+KVEIQEVRVEIPSSITSSQVVVP VVDSVNNPQEQQIN QTPHNDIVTNE V P EIELRR VRSRRSA SDDYLVYLHESEFDLSID++P
Subjt: SGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEP
Query: VSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
VSFSQAIK DNSTKWLDAMK+ELKS+NDNEVWDLVELPKESKRV CKWVFKTK
Subjt: VSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
|
|
| KYP40054.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 4.1e-113 | 70.93 | Show/hide |
Query: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
MSGTPQQNGV+ERRNRTL++MVRSML NSSLP+SLW YAL+TA YLLNRVPSK+VPKTPFELW GRKPSLRHLHVWGC AE+R YNP EKKLD+RT S +
Subjt: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
Query: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
FI YPEKSKGYRFYC NH+TRI+ETGN RFIEN +SGS PRKVEIQE+RV++P + S++VVVP V++ +NN +EQQ N HN++ NEP+ E P
Subjt: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
Query: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
+I LRRS R RRSA +DY+VYL ESE DL I+++PV+FSQAI DN+ KWLDAMK ELKSM N VWDLVELP+ KRV CKWVFKTK
Subjt: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
|
|
| RYE20332.1 transposase, partial [Sphingobacteriaceae bacterium] | 7.7e-112 | 78.65 | Show/hide |
Query: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
M GTPQQNGVAERRNRTLM+MVRSML NSSLP SLWM+AL+TA YLLNRVPSK+VPKTPFELWTGRKPSLRHLHV+GC AEVRIYNPHE+KLDSRT S F
Subjt: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
Query: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
FI YPEKSKGYRFYC NHSTRIVETGN RFIEN +SGSLEPR VEIQEVRV++P + SSQVVVPV VD N+ QEQQIN Q P ND+V NEP+ + P
Subjt: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
Query: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEV
E+ LRRSVR RRSA SDDY+VYL ESE+DL ID++PVSFSQAI+ +NS KWLDAMKEELKSM+ NEV
Subjt: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEV
|
|
| TYK04201.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-111 | 86.29 | Show/hide |
Query: AQYLLNRVPSKSVPKTPFELWTG-RKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLE
AQY + P ++P TP + RKPSLRHL+VWGCQAE RIYNPHEKK DSRTTS FFI Y EKSKGYRFYC NHSTRIVETGNVRFIENDII+GSLE
Subjt: AQYLLNRVPSKSVPKTPFELWTG-RKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLE
Query: PRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQ
PRKVEIQEVRVEIPSSITSSQ+VVPVVVDSVNNPQEQQIN QTPHNDIVTNEPVTEGP EIELRRSVRSRRSA SDDYLVYLHESEFDLSID++PVSFSQ
Subjt: PRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQ
Query: AIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
AIK DNSTKWLDAMKEELKSMNDNEVWDLVELPK+SKRV CKWVFKTK
Subjt: AIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151RBN7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-113 | 70.93 | Show/hide |
Query: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
MSGTPQQNGV+ERRNRTL++MVRSML NSSLP+SLW YAL+TA YLLNRVPSK+VPKTPFELW GRKPSLRHLHVWGC AE+R YNP EKKLD+RT S +
Subjt: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
Query: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
FI YPEKSKGYRFYC NH+TRI+ETGN RFIEN +SGS PRKVEIQE+RV++P + S++VVVP V++ +NN +EQQ N HN++ NEP+ E P
Subjt: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
Query: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
+I LRRS R RRSA +DY+VYL ESE DL I+++PV+FSQAI DN+ KWLDAMK ELKSM N VWDLVELP+ KRV CKWVFKTK
Subjt: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
|
|
| A0A4Q3ELL0 Transposase (Fragment) | 3.7e-112 | 78.65 | Show/hide |
Query: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
M GTPQQNGVAERRNRTLM+MVRSML NSSLP SLWM+AL+TA YLLNRVPSK+VPKTPFELWTGRKPSLRHLHV+GC AEVRIYNPHE+KLDSRT S F
Subjt: MSGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
Query: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
FI YPEKSKGYRFYC NHSTRIVETGN RFIEN +SGSLEPR VEIQEVRV++P + SSQVVVPV VD N+ QEQQIN Q P ND+V NEP+ + P
Subjt: FISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPL
Query: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEV
E+ LRRSVR RRSA SDDY+VYL ESE+DL ID++PVSFSQAI+ +NS KWLDAMKEELKSM+ NEV
Subjt: EIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEV
|
|
| A0A5A7SUJ2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-113 | 93.78 | Show/hide |
Query: GRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVV
GRKPSLRHLHVWGCQAEV+IYNPHEKKLDSRTTS FFI YPEKSKGYRFYC NHSTRIVE GNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVV
Subjt: GRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVV
Query: VPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMND
VPVVV SVNNPQEQQIN+QTPHNDIVTNEPVTEGP EIELRRSVRSRRSA SDDYLVYLHESEFDLSID +PVSFSQAIK DNST WLDAMKEELKSMND
Subjt: VPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMND
Query: NEVWDLVELPKESKRVECKWVFKTK
NEVWDLVELPKESKRV CKWVFKTK
Subjt: NEVWDLVELPKESKRVECKWVFKTK
|
|
| A0A5D3BWW5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.3e-112 | 86.29 | Show/hide |
Query: AQYLLNRVPSKSVPKTPFELWTG-RKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLE
AQY + P ++P TP + RKPSLRHL+VWGCQAE RIYNPHEKK DSRTTS FFI Y EKSKGYRFYC NHSTRIVETGNVRFIENDII+GSLE
Subjt: AQYLLNRVPSKSVPKTPFELWTG-RKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLE
Query: PRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQ
PRKVEIQEVRVEIPSSITSSQ+VVPVVVDSVNNPQEQQIN QTPHNDIVTNEPVTEGP EIELRRSVRSRRSA SDDYLVYLHESEFDLSID++PVSFSQ
Subjt: PRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEPVSFSQ
Query: AIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
AIK DNSTKWLDAMKEELKSMNDNEVWDLVELPK+SKRV CKWVFKTK
Subjt: AIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
|
|
| A0A5D3E5G1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-124 | 91.7 | Show/hide |
Query: MYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDII
MYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTS FFI YPEKSKGYRFYC HSTRIVETGNVRFIENDI
Subjt: MYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFFISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDII
Query: SGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEP
SGSLEP+KVEIQEVRVEIPSSITSSQVVVP VVDSVNNPQEQQIN QTPHNDIVTNE V P EIELRR VRSRRSA SDDYLVYLHESEFDLSID++P
Subjt: SGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGPLEIELRRSVRSRRSATSDDYLVYLHESEFDLSIDSEP
Query: VSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
VSFSQAIK DNSTKWLDAMK+ELKS+NDNEVWDLVELPKESKRV CKWVFKTK
Subjt: VSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWVFKTK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.8e-15 | 41.35 | Show/hide |
Query: TPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSV---PKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
TPQ NGV+ER RT+ R+M+ + L S W A+ TA YL+NR+PS+++ KTP+E+W +KP L+HL V+G V I N + K D ++
Subjt: TPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSV---PKTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDF
Query: FISY
F+ Y
Subjt: FISY
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-31 | 34.21 | Show/hide |
Query: GTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFF
GTPQ NGVAER NRT++ VRSML + LP S W A++TA YL+NR PS + + P +WT ++ S HL V+GC+A + KLD ++ F
Subjt: GTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQAEVRIYNPHEKKLDSRTTSDFF
Query: ISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVE--IQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGP
I Y ++ GYR + +++ + +V F E+++ + + KV+ I V IPS+ +++ D V+ EQ P I E + EG
Subjt: ISYPEKSKGYRFYCLNHSTRIVETGNVRFIENDIISGSLEPRKVE--IQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINVQTPHNDIVTNEPVTEGP
Query: LEIE-----------LRRSVRSR---RSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWV
E+E LRRS R R R S +Y++ +S D EP S + + + + AM+EE++S+ N + LVELPK + ++CKWV
Subjt: LEIE-----------LRRSVRSR---RSATSDDYLVYLHESEFDLSIDSEPVSFSQAIKEDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVECKWV
Query: FKTK
FK K
Subjt: FKTK
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.5e-12 | 31.14 | Show/hide |
Query: TPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQAE--VRIYNPHEKKLDSRTTSDF
TP+ NG++ER++R ++ ++L ++S+P + W YA A YL+NR+P+ + ++PF+ G P+ L V+GC +R YN H KLD ++
Subjt: TPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQAE--VRIYNPHEKKLDSRTTSDF
Query: FISYPEKSKGYRFYCLN-HSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVP
F+ Y Y CL+ ++R+ + +VRF EN + +QE R E S + S +P
Subjt: FISYPEKSKGYRFYCLN-HSTRIVETGNVRFIENDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVP
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.1e-11 | 33.08 | Show/hide |
Query: TPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQAE--VRIYNPHEKKLDSRTTSDF
TP+ NG++ER++R ++ M ++L ++S+P + W YA A YL+NR+P+ + ++PF+ G+ P+ L V+GC +R YN H KL+ ++
Subjt: TPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQAE--VRIYNPHEKKLDSRTTSDF
Query: FISYPEKSKGYRFYCLNHST-RIVETGNVRFIE
F+ Y Y CL+ T R+ + +V+F E
Subjt: FISYPEKSKGYRFYCLNHST-RIVETGNVRFIE
|
|
