| GenBank top hits | e value | %identity | Alignment |
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| KAA0042230.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.8e-82 | 88.95 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASSSAY IESVNLWHGRLGHVNF S RKLKDL+LINT++SH+T KCPICVESKF+KKPFK VESR+TDLLELIHSDLA+F+ TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
DDYSRFTKIYLIKTKDEAGSMFLKF+AE ENQLGKKIKRLRSDR GEYSDKT KDFCESNGIIHEFTAPYSP
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| KAA0045258.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-81 | 88.95 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASS Y IESVNLWHGRLGHVNFASIRKLKDL+LINTSESH+TGKCPICVESKF+KKPFKLV+SR+ DLLELIHSDLA+F+ TSR GKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
DDYSRFTKIYLIKTKDEAGSMFLKF AE ENQLGKKIKRLR DR GEYSDKT KDFCESNGIIHEFTAPYSP
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| KAA0060696.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-82 | 90.06 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASSSAY IESVNLWHGRLGHVNFAS +KLKDL+LINTSESH+T KCPICVESKF+KKPFK VE+R+T+LLELIHSDLA+FKN TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
DDYSRFTKIYLIKTKDEAGSMFLKF+AE ENQLGKKIKRLRSDRCGEYSDKT KDFCESN IIHEFTAPYS
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
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| TYK03297.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-82 | 90.06 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASSSAY IESVNLWHGRLGHVNFAS +KLKDL+LINTSESH+T KCPICVESKF+KKPFK VE+R+T+LLELIHSDLA+FKN TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
DDYSRFTKIYLIKTKDEAGSMFLKF+AE ENQLGKKIKRLRSDRCGEYSDKT KDFCESN IIHEFTAPYS
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
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| TYK29957.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.2e-81 | 87.79 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MN NASSS Y IE VNLWHGRLGHVNFASIRKLKDL+LINTS+SH+TGKCPICVESKF+KKPFK VESR+TDLLELIHSDLA+FK TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
DDYSRFTKIYLIK KDEAGSMFLKF+AE ENQLGKKIKRLRSDR GEYSDKT KDFCESNG+ HEFTAPY P
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7TFW9 Ty1-copia retrotransposon protein | 1.8e-82 | 88.95 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASSSAY IESVNLWHGRLGHVNF S RKLKDL+LINT++SH+T KCPICVESKF+KKPFK VESR+TDLLELIHSDLA+F+ TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
DDYSRFTKIYLIKTKDEAGSMFLKF+AE ENQLGKKIKRLRSDR GEYSDKT KDFCESNGIIHEFTAPYSP
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| A0A5A7TQW7 Ty1-copia retrotransposon protein | 5.3e-82 | 88.95 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASS Y IESVNLWHGRLGHVNFASIRKLKDL+LINTSESH+TGKCPICVESKF+KKPFKLV+SR+ DLLELIHSDLA+F+ TSR GKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
DDYSRFTKIYLIKTKDEAGSMFLKF AE ENQLGKKIKRLR DR GEYSDKT KDFCESNGIIHEFTAPYSP
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| A0A5A7UCV4 Ty1-copia retrotransposon protein | 2.0e-81 | 87.79 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MN NASSS Y IE VNLWHGRLGHVNFASIRKLKDL+LINTS+SH+TGKCPICVESKF+KKPFK VESR+TDLLELIHSDLA+FK TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
DDYSRFTKIYLIK KDEAGSMFLKF+AE ENQLGKKIKRLRSDR GEYSDKT KDFCESNG+ HEFTAPY P
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| A0A5A7V2H1 Ty1-copia retrotransposon protein | 8.2e-83 | 90.06 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASSSAY IESVNLWHGRLGHVNFAS +KLKDL+LINTSESH+T KCPICVESKF+KKPFK VE+R+T+LLELIHSDLA+FKN TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
DDYSRFTKIYLIKTKDEAGSMFLKF+AE ENQLGKKIKRLRSDRCGEYSDKT KDFCESN IIHEFTAPYS
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
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| A0A5D3BV07 Ty1-copia retrotransposon protein | 8.2e-83 | 90.06 | Show/hide |
Query: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
MNANASSSAY IESVNLWHGRLGHVNFAS +KLKDL+LINTSESH+T KCPICVESKF+KKPFK VE+R+T+LLELIHSDLA+FKN TSRGGKNYYVSFV
Subjt: MNANASSSAYKIESVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFV
Query: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
DDYSRFTKIYLIKTKDEAGSMFLKF+AE ENQLGKKIKRLRSDRCGEYSDKT KDFCESN IIHEFTAPYS
Subjt: DDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.4e-15 | 30.29 | Show/hide |
Query: SSSAYKIESVNLWHGRLGHVNFASIRKLK------DLKLINTSESHKTGKCPICVESKFYKKPFKLVESRS--TDLLELIHSDLANFKNITSRGGKNYYV
S +A + LWH R GH++ + ++K D L+N E C C+ K + PFK ++ ++ L ++HSD+ + KNY+V
Subjt: SSSAYKIESVNLWHGRLGHVNFASIRKLK------DLKLINTSESHKTGKCPICVESKFYKKPFKLVESRS--TDLLELIHSDLANFKNITSRGGKNYYV
Query: SFVDDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
FVD ++ + YLIK K + SMF F A+ E K+ L D EY + FC GI + T P++P
Subjt: SFVDDYSRFTKIYLIKTKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-30 | 38.99 | Show/hide |
Query: SVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFVDDYSRFTKIYLIK
SV+LWH R+GH++ ++ L LI+ ++ C C+ K ++ F+ R ++L+L++SD+ I S GG Y+V+F+DD SR +Y++K
Subjt: SVNLWHGRLGHVNFASIRKLKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFVDDYSRFTKIYLIK
Query: TKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
TKD+ +F KF A E + G+K+KRLRSD GEY+ + F+++C S+GI HE T P +P
Subjt: TKDEAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.6e-14 | 32.05 | Show/hide |
Query: WHGRLGHVNFASIRK-LKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFVDDYSRFTKIYLIKTKD
WH RLGH + + + + L + SHK C C+ +K K PF ST LE I+SD+ + I S YYV FVD ++R+T +Y +K K
Subjt: WHGRLGHVNFASIRK-LKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFVDDYSRFTKIYLIKTKD
Query: EAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
+ F+ F+ EN+ +I SD GE+ ++ +GI H + P++P
Subjt: EAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.4e-16 | 33.33 | Show/hide |
Query: WHGRLGHVNFASIRK-LKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFVDDYSRFTKIYLIKTKD
WH RLGH + A + + + L + SHK C C +K +K PF S+ LE I+SD+ + I S YYV FVD ++R+T +Y +K K
Subjt: WHGRLGHVNFASIRK-LKDLKLINTSESHKTGKCPICVESKFYKKPFKLVESRSTDLLELIHSDLANFKNITSRGGKNYYVSFVDDYSRFTKIYLIKTKD
Query: EAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
+ F+ F++ EN+ +I L SD GE+ +D+ +GI H + P++P
Subjt: EAGSMFLKFRAEFENQLGKKIKRLRSDRCGEYSDKTFKDFCESNGIIHEFTAPYSP
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