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Cmc04g0096191 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0096191
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Genome locationCMiso1.1chr04:10351268..10351684
RNA-Seq ExpressionCmc04g0096191
SyntenyCmc04g0096191
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR023043 - NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PRQ15703.1 putative NADH:ubiquinone reductase (H(+)-translocating) [Rosa chinensis]4.4e-4980Show/hide
Query:  DRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMS
        +RLIRYIFHI+RST M LLYEYD F ++         L F ISGVLAP+SK PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMS
Subjt:  DRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMS

Query:  FDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        FDVLGVSVFIEALIFVLILIVG +YAWRKGA+EWS
Subjt:  FDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

QGW14609.1 NADH-plastoquinone oxidoreductase subunit 3 [Acer tetramerum]6.4e-4876.81Show/hide
Query:  TSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPW
        ++++R IRYIFHI RS+ MFLLY+YDIF ++         L FLIS VLAP+SK PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPW
Subjt:  TSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPW

Query:  AMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        AMSFDVLGVSVFIEA IF+LILIVG VYAWRKGA+EWS
Subjt:  AMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

TYH12547.1 hypothetical protein ES288_A06G076400v1 [Gossypium darwinii]2.4e-4779.85Show/hide
Query:  RLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSF
        RLIR IFHI RS+ MFLLYEYDIF ++         L FLISGVLAP+ K PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMSF
Subjt:  RLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSF

Query:  DVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        DVLGV VFIEA IFVLILIVG VYAWRKGA+EWS
Subjt:  DVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

YP_009443614.1 NADH dehydrogenase subunit 3 [Aconitum angustius]1.1e-4775.54Show/hide
Query:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP
        E++   L+ +IFHI RS  MFLL+EYDIF ++         L F+ISGVLAP+++ PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYP
Subjt:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP

Query:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Subjt:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

YP_009996061.1 NADH-plastoquinone oxidoreductase subunit 3 [Aster flaccidus]2.4e-4778.79Show/hide
Query:  IRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDV
        +RYIFH+ RS  MFLLYEYDIF ++         L F ISG LAP+SK PEKL SYESGIEP+GDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMSFDV
Subjt:  IRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDV

Query:  LGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        LGVSVF+EALIFVLILIVGLVYAWRKGA+EWS
Subjt:  LGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

TrEMBL top hitse value%identityAlignment
A0A2D3C249 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic5.3e-4875.54Show/hide
Query:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP
        E++   L+ +IFHI RS  MFLL+EYDIF ++         L F+ISGVLAP+++ PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYP
Subjt:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP

Query:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Subjt:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

A0A2D3C2C9 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic5.3e-4875.54Show/hide
Query:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP
        E++   L+ +IFHI RS  MFLL+EYDIF ++         L F+ISGVLAP+++ PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYP
Subjt:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP

Query:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Subjt:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

A0A2H4V2P1 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic5.3e-4875.54Show/hide
Query:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP
        E++   L+ +IFHI RS  MFLL+EYDIF ++         L F+ISGVLAP+++ PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYP
Subjt:  ETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYP

Query:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Subjt:  WAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

A0A2P6P198 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic2.1e-4980Show/hide
Query:  DRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMS
        +RLIRYIFHI+RST M LLYEYD F ++         L F ISGVLAP+SK PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMS
Subjt:  DRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMS

Query:  FDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        FDVLGVSVFIEALIFVLILIVG +YAWRKGA+EWS
Subjt:  FDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

A0A650G879 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic3.1e-4876.81Show/hide
Query:  TSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPW
        ++++R IRYIFHI RS+ MFLLY+YDIF ++         L FLIS VLAP+SK PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPW
Subjt:  TSTDRLIRYIFHIDRSTFMFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPW

Query:  AMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS
        AMSFDVLGVSVFIEA IF+LILIVG VYAWRKGA+EWS
Subjt:  AMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

SwissProt top hitse value%identityAlignment
B2XWK9 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic9.6e-4780.83Show/hide
Query:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIF ++         L FL+SG+LAP+ K+PEKL SYESGIEP+GDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

P52765 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic1.5e-4783.33Show/hide
Query:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIF ++         L FLISG+LAP+SK PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Q49KZ3 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic5.6e-4782.5Show/hide
Query:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIF ++         L F ISG+LAP+SK PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Q4VZH0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic1.0e-4886.67Show/hide
Query:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIF  +         L FLISGVLAPLSKEPEKL SYESGIEPMGDAWVQFRIRYYMFALVFVVFDVE VFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Q9M3L9 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic5.6e-4781.67Show/hide
Query:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIF ++         L FL SG+LAP+SK PEKL SYESGIEPMGDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMSFD+LGVSVFIEALIF
Subjt:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Arabidopsis top hitse value%identityAlignment
AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein2.7e-1238.1Show/hide
Query:  SKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME
        S  PEKL +YE G +P GDA  +F IR+Y+ +++F++ D+E  F +PWA+  + + +  F   + F+ IL +G +Y W++GA +
Subjt:  SKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein4.9e-4679.17Show/hide
Query:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIF ++         L FLISGVL+P+ K PEKL SYESGIEP+GDAW+QFRIRYYMFALVFVVFDVE VFLYPWAMSFDVLGVS FIEA IF
Subjt:  MFLLYEYDIFKSY-------SFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILI+GLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

ATMG00990.1 NADH dehydrogenase 37.9e-1233.33Show/hide
Query:  LLYEYDIFKSYSFLEFLIS----GVLAPL----SKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIFV
        ++ E+     Y  +  L+S    GV  P     S  PEKL +YE G +P GDA  +F IR+Y+ +++F++ D+E  F +PWA+  + + +  F   + F+
Subjt:  LLYEYDIFKSYSFLEFLIS----GVLAPL----SKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVSVFIEALIFV

Query:  LILIVGLVYAWRKGAME
         IL +G +Y W++GA +
Subjt:  LILIVGLVYAWRKGAME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATCTTCAAACGAGACATCTACCGATCGATTAATCCGGTATATTTTCCACATTGATAGGAGTACGTTTATGTTTCTGCTTTACGAATATGATATTTTCAAGTC
TTATTCCTTTTTGGAATTTCTAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGG
TACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAAAAGTTTTTCTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCC
GTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCAATGGAATGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAATCTTCAAACGAGACATCTACCGATCGATTAATCCGGTATATTTTCCACATTGATAGGAGTACGTTTATGTTTCTGCTTTACGAATATGATATTTTCAAGTC
TTATTCCTTTTTGGAATTTCTAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGG
TACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAAAAGTTTTTCTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCC
GTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCAATGGAATGGTCTTAG
Protein sequenceShow/hide protein sequence
MDESSNETSTDRLIRYIFHIDRSTFMFLLYEYDIFKSYSFLEFLISGVLAPLSKEPEKLLSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVEKVFLYPWAMSFDVLGVS
VFIEALIFVLILIVGLVYAWRKGAMEWS