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Cmc04g0096281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0096281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionWD40/YVTN repeat-like-containing domain-containing protein
Genome locationCMiso1.1chr04:10451507..10452236
RNA-Seq ExpressionCmc04g0096281
SyntenyCmc04g0096281
Gene Ontology termsGO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2083677.1 hypothetical protein ES319_A05G284900v1 [Gossypium barbadense]8.9e-1553.09Show/hide
Query:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC
        +F C + L+ LL +            E+ +G   GRC+ VMDPK CNL SCK+QCLQ  NGNGVCL N K GYQC CYINC
Subjt:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC

KAG6793847.1 hypothetical protein POTOM_003071 [Populus tomentosa]2.7e-1153.42Show/hide
Query:  LAFFCILTLSFLLFSEMK--MGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVG-YQCACYINC
        L+ F +  L     +EM   M +  GRC  VMDP  CNLSSC+++CLQ  NGNGVCL N K G YQC CY+NC
Subjt:  LAFFCILTLSFLLFSEMK--MGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVG-YQCACYINC

KAG9446637.1 hypothetical protein H6P81_012765 [Aristolochia fimbriata]2.2e-1353.42Show/hide
Query:  LSLAFFCILTLSFLLFSEMKMG-NGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC
        + L +   + L+ L+F+ M+    G GRC+ VMDP  CNL SCK+QCLQ  NGNGVC+ N K GY CACY NC
Subjt:  LSLAFFCILTLSFLLFSEMKMG-NGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC

OAY28677.1 hypothetical protein MANES_15G086200v8 [Manihot esculenta]1.6e-1154.43Show/hide
Query:  MKLSLAFFCILTLSFLL----FSEMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVG-YQCACYINC
        MK      C+LTL  L       E+K  +G GRC  VMDP  CNLSSC+++CLQ  NGNGVC+ N K G YQC CYINC
Subjt:  MKLSLAFFCILTLSFLL----FSEMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVG-YQCACYINC

TYI29212.1 hypothetical protein ES332_A05G300600v1 [Gossypium tomentosum]1.2e-1469.09Show/hide
Query:  EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC
        E+ +G   GRC+ VMDPK CNL SCK+QCLQ  NGNGVCL N K GYQC CYINC
Subjt:  EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC

TrEMBL top hitse value%identityAlignment
A0A2C9UED4 Uncharacterized protein7.6e-1254.43Show/hide
Query:  MKLSLAFFCILTLSFLL----FSEMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVG-YQCACYINC
        MK      C+LTL  L       E+K  +G GRC  VMDP  CNLSSC+++CLQ  NGNGVC+ N K G YQC CYINC
Subjt:  MKLSLAFFCILTLSFLL----FSEMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVG-YQCACYINC

A0A5D2GLM3 Uncharacterized protein4.3e-1553.09Show/hide
Query:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC
        +F C + L+ LL +            E+ +G   GRC+ VMDPK CNL SCK+QCLQ  NGNGVCL N K GYQC CYINC
Subjt:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC

A0A5D2QM83 Uncharacterized protein5.6e-1569.09Show/hide
Query:  EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC
        E+ +G   GRC+ VMDPK CNL SCK+QCLQ  NGNGVCL N K GYQC CYINC
Subjt:  EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC

A0A5D2ZBX6 Uncharacterized protein4.3e-1553.09Show/hide
Query:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC
        +F C + L+ LL +            E+ +G   GRC+ VMDPK CNL SCK+QCLQ  NGNGVCL N K GYQC CYINC
Subjt:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC

A0A5J5VXA1 Uncharacterized protein4.3e-1553.09Show/hide
Query:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC
        +F C + L+ LL +            E+ +G   GRC+ VMDPK CNL SCK+QCLQ  NGNGVCL N K GYQC CYINC
Subjt:  AFFCILTLSFLLFS------------EMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTCTTTGGCTTTCTTTTGCATTTTAACTCTCTCTTTTCTCCTCTTCTCAGAGATGAAGATGGGAAATGGAAGAGGAAGATGCATGACAGTGATGGATCCTAA
AGAATGCAACTTATCATCTTGCAAGAAACAATGCCTTCAATACAACAATGGAAATGGAGTTTGTTTAAGAAACTTCAAAGTGGGTTACCAATGTGCTTGTTATATTAATT
GCTTATCAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATTGTTTCATTGTGCTAAAGCTTGGAGAGACCATGAAGCTTTCTTTGGCTTTCTTTTGCATTTTAACTCTCTCTTTTCTCCTCTTCTCAGAGATGAAGATGGGAAATGGA
AGAGGAAGATGCATGACAGTGATGGATCCTAAAGAATGCAACTTATCATCTTGCAAGAAACAATGCCTTCAATACAACAATGGAAATGGAGTTTGTTTAAGAAACTTCAA
AGTGGGTTACCAATGTGCTTGTTATATTAATTGCTTATCAACTTAAAATTATCAACATTTTCTTCTTTCTCTTATTCTTCTTCTTCTTATATTTTGTTTTTCAAAATTTT
ATCCTCATC
Protein sequenceShow/hide protein sequence
MKLSLAFFCILTLSFLLFSEMKMGNGRGRCMTVMDPKECNLSSCKKQCLQYNNGNGVCLRNFKVGYQCACYINCLST