| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0053083.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-108 | 99.48 | Show/hide |
Query: NRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMESEFIALELVGQEAEWIKNLLGD
+RYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMESEFIALELVGQEAEWIKNLLGD
Subjt: NRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMESEFIALELVGQEAEWIKNLLGD
Query: VPLWGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVVLDSCEHGPKALRRSIALDNWVVYYDRLDGP
VPLWGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVVLDSCEHGPKALRRSIALDNWVVYYDRLDGP
Subjt: VPLWGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVVLDSCEHGPKALRRSIALDNWVVYYDRLDGP
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| TYK07981.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 9.3e-94 | 87.68 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTK LTRK+V
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDS
LDS
Subjt: LDS
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| TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-93 | 87.19 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTK LTRK+V
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDS
LDS
Subjt: LDS
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| TYK23072.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-93 | 87.19 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTK LTRK+V
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDS
LDS
Subjt: LDS
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| TYK23469.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-97 | 81.14 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLAD + +
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDSCEHGPKALRRSIALDNWVVYYDRLD
CEHG +ALRRSIALD VVY DRLD
Subjt: LDSCEHGPKALRRSIALDNWVVYYDRLD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UAW3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.4e-109 | 99.48 | Show/hide |
Query: NRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMESEFIALELVGQEAEWIKNLLGD
+RYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMESEFIALELVGQEAEWIKNLLGD
Subjt: NRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMESEFIALELVGQEAEWIKNLLGD
Query: VPLWGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVVLDSCEHGPKALRRSIALDNWVVYYDRLDGP
VPLWGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVVLDSCEHGPKALRRSIALDNWVVYYDRLDGP
Subjt: VPLWGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVVLDSCEHGPKALRRSIALDNWVVYYDRLDGP
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| A0A5D3C7Z8 Ty1-copia retrotransposon protein | 4.5e-94 | 87.68 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTK LTRK+V
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDS
LDS
Subjt: LDS
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| A0A5D3CM58 Ty1-copia retrotransposon protein | 2.2e-93 | 87.19 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTK LTRK+V
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDS
LDS
Subjt: LDS
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| A0A5D3DHN5 Ty1-copia retrotransposon protein | 2.2e-93 | 87.19 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTK LTRK+V
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDS
LDS
Subjt: LDS
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| A0A5D3DJQ1 Ty1-copia retrotransposon protein | 2.0e-97 | 81.14 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MYLMNYT PDI YAVSRLS YTHN NRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYVFLL GAISWK +KQT IARS
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
TMESEFIALEL GQEAEWIKNLLGDVPLWGTSVP AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLAD + +
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTRKVV
Query: LDSCEHGPKALRRSIALDNWVVYYDRLD
CEHG +ALRRSIALD VVY DRLD
Subjt: LDSCEHGPKALRRSIALDNWVVYYDRLD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.9e-23 | 33.84 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNK---FPAVLEGYCDANWVTDNDEVNSTSGYVF-LLECGAISWKFSKQTF
MY+M T PD+T AV+ LS Y+ N W L+ +LRYLKGTID L F K F + GY D++W + ST+GY+F + + I W +Q
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNK---FPAVLEGYCDANWVTDNDEVNSTSGYVF-LLECGAISWKFSKQTF
Query: IARSTMESEFIALELVGQEAEWIKNLLGDVPL------------WGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRL
+A S+ E+E++AL +EA W+K LL + + G A N + +++HI +++ ++ ++ I LE++ +E LAD TK L
Subjt: IARSTMESEFIALELVGQEAEWIKNLLGDVPL------------WGTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRL
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| P0CV72 Secreted RxLR effector protein 161 | 1.2e-19 | 44.17 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKF-PAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIAR
MYLM T PD+ AV LS + + HW AL+ +LRYL+ T Y L F + A L GY DA+W D + STSGY+F L G +SW+ KQ +A
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKF-PAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIAR
Query: STMESEFIALELVGQEAEWI
S+ E E++AL QEA W+
Subjt: STMESEFIALELVGQEAEWI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.2e-28 | 34.36 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
MY M T PDI +AV +S + N + HW+A++ +LRYL+GT CL F +L+GY DA+ D D S++GY+F GAISW+ Q +A S
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARS
Query: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-----------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTR
T E+E+IA G+E W+K L ++ L +KNS+Y+ +++HI +R+ +++++ + ++ + + + +N AD LTK + R
Subjt: TMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-----------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTR
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-23 | 32.81 | Show/hide |
Query: YTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMES
+T PDI+YAV+RLS + H H AL+ +LRYL GT ++ + K + L Y DA+W D D+ ST+GY+ L ISW KQ + RS+ E+
Subjt: YTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMES
Query: EFIALELVGQEAEWIKNLLGDVPLWGTSVP------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTR
E+ ++ E +WI +LL ++ + T P N V++ + +HI + + ++ ++ G + + V + LAD LTK L+R
Subjt: EFIALELVGQEAEWIKNLLGDVPLWGTSVP------------AKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.6e-26 | 33.85 | Show/hide |
Query: YTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMES
+T PD++YAV+RLS Y H HW+AL+ +LRYL GT D+ + K + L Y DA+W D D+ ST+GY+ L ISW KQ + RS+ E+
Subjt: YTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTMES
Query: EFIALELVGQEAEWIKNLLGDVPLW------------GTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTR
E+ ++ E +WI +LL ++ + G + N V++ + +HI L + ++ ++ G + + V + LAD LTK L+R
Subjt: EFIALELVGQEAEWIKNLLGDVPLW------------GTSVPAKNSVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRSEKNLADPLTKRLTR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.6e-14 | 29.12 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIAR
MYL T DI++AV++LS ++ H A+ +L Y+KGT+ L ++ + L+ + DA++ + D ST+GY L ISWK KQ +++
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIAR
Query: STMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLR-HAVVKQLLKEGTISLEF
S+ E+E+ AL E W+ ++ L S P A N+V++ +++HI H+V ++ + + T+S F
Subjt: STMESEFIALELVGQEAEWIKNLLGDVPLWGTSVP-------------AKNSVYNGKSRHIRLR-HAVVKQLLKEGTISLEF
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.1e-04 | 31.33 | Show/hide |
Query: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLL
MYL T PD+T+AV+RLS ++ A+ +L Y+KGT+ L ++ + L+ + D++W + D S +G+ L+
Subjt: MYLMNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLL
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 3.2e-15 | 34.48 | Show/hide |
Query: MNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTM
+ T PDI+YAV+ + H +D L+ +LRY+KGTI + L+ +K + ++ +CD++W ST+G+ L C ISW +Q ++RS+
Subjt: MNYTIPDITYAVSRLSTYTHNLNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLECGAISWKFSKQTFIARSTM
Query: ESEFIALELVGQEAEW
E+E+ AL L E W
Subjt: ESEFIALELVGQEAEW
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