; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0096421 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0096421
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty1-H Gag-Pol polyprotein
Genome locationCMiso1.1chr04:10658570..10659298
RNA-Seq ExpressionCmc04g0096421
SyntenyCmc04g0096421
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD6453934.1 hypothetical protein E3N88_08640 [Mikania micrantha]5.3e-9070.35Show/hide
Query:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK
        +WKEAIKSE+DS++ NHTW+L DLP GNKPI  KWIFK+K +P+G++++YKARLV+ G+TQK G DYFDTYSPVTKITTI +LI++AAI+ LLIH+MDVK
Subjt:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK

Query:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT
        TAFLNGDL+EEIYM QPEGF +SG E+KVCKLRKSLYGLK APK+WYEKF+ TL ++G+ +N+SD+CVYSK  +   +LICLYVDDMLIFG +M  I  T
Subjt:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT

Query:  KLFLSSHFEMKDLGEADIILGVRIRK
        K FLSS FEMKDLGEAD+ILGV+I++
Subjt:  KLFLSSHFEMKDLGEADIILGVRIRK

KAG7551885.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]5.5e-8767.11Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT
        WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSI+++KARLV  G+ QKQG DYFDTY+PVTKI +I  L+A+A+ H L++H+MDVKT
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT

Query:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK
        AFLNGDL EEIYM QPEGF I GQENKVCKL KSLYGLK APKQW+EKF+NTL++NGF  N  DTCV+SKV     ++ICLYVDDMLI GT++E++ DTK
Subjt:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK

Query:  LFLSSHFEMKDLGEADIILGVRIRK
        +FLSS F+MKDLGEAD+ILG+++ K
Subjt:  LFLSSHFEMKDLGEADIILGVRIRK

KAG7571733.1 Integrase catalytic core [Arabidopsis suecica]5.5e-8767.11Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT
        WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSI+++KARLV  G+ QKQG DYFDTY+PVTKI +I  L+A+A+ H L++H+MDVKT
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT

Query:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK
        AFLNGDL EEIYM QPEGF I GQENKVCKL KSLYGLK APKQW+EKF+NTL++NGF  N  DTCV+SKV     ++ICLYVDDMLI GT++E++ DTK
Subjt:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK

Query:  LFLSSHFEMKDLGEADIILGVRIRK
        +FLSS F+MKDLGEAD+ILG+++ K
Subjt:  LFLSSHFEMKDLGEADIILGVRIRK

KAG7592238.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]5.5e-8767.11Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT
        WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSI+++KARLV  G+ QKQG DYFDTY+PVTKI +I  L+A+A+ H L++H+MDVKT
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT

Query:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK
        AFLNGDL EEIYM QPEGF I GQENKVCKL KSLYGLK APKQW+EKF+NTL++NGF  N  DTCV+SKV     ++ICLYVDDMLI GT++E++ DTK
Subjt:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK

Query:  LFLSSHFEMKDLGEADIILGVRIRK
        +FLSS F+MKDLGEAD+ILG+++ K
Subjt:  LFLSSHFEMKDLGEADIILGVRIRK

TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]6.0e-11892.54Show/hide
Query:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK
        MWKEAIKSELDSL MNHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYKARLVVVGYTQKQG DYFDTYSPVTKITTI ALIALAAIH+LLIH+MDVK
Subjt:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK

Query:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT
        TAFLNG+LEEEIYMTQPEGFKISGQENKVCKLRKSLYGLK APKQWYEKFNNTLI NGFKINSSDTCVYSK+  ADCILICLYVDDMLIFGTNMELITDT
Subjt:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT

Query:  KLFLSSHFEMKDLGEADIILGVRIRKRK
        K FLSSHFEMKDLGEAD+ILGV+IRK K
Subjt:  KLFLSSHFEMKDLGEADIILGVRIRKRK

TrEMBL top hitse value%identityAlignment
A0A151TB60 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment)8.0e-8465.04Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT
        WKEAI+ E+DS+  N+TW LVDLP G KPI CKWIFKRK  P+GSIE+YKARLV  G+TQKQ  D+FDT++PV +I++I  LIALA+IH L+IH+MDVKT
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT

Query:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK
        AFLNG+LEEEIYMTQPEG ++ GQENKVC+L KSLYGLK APKQW+EKF+  L+ +GF  +S+D CVY+K    DC++ICLYVDDMLIFGT  +++  TK
Subjt:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK

Query:  LFLSSHFEMKDLGEADIILGVRIRKR
         FL+S+F+MKD+GEA +ILGV++ ++
Subjt:  LFLSSHFEMKDLGEADIILGVRIRKR

A0A2N9EQT1 Integrase catalytic domain-containing protein4.1e-8869.51Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT
        WK+AI SEL+S++ NHTW+LV+LP G K I  KW+FK+K K +GSIE++KARLV  GYTQK+G DYFDTYSPVT++TTI  L+A+A+I+ L+IH+MDVKT
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT

Query:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK
        AFLNGDL+EEIYM QPEGF + GQENKVCKLRKSLYGLK APKQW+EKF+ TL+ NGF +N SD CVYSK   A  ++ICLYVDDMLIFGT+M  + +TK
Subjt:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK

Query:  LFLSSHFEMKDLGEADIILGVRI
         FLSS+F+MKDLGEAD+ILG+RI
Subjt:  LFLSSHFEMKDLGEADIILGVRI

A0A2N9H4B0 Uncharacterized protein4.1e-8869.51Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT
        WK+AI SEL+S++ NHTW+LV+LP G K I  KW+FK+K K +GSIE++KARLV  GYTQK+G DYFDTYSPVT++TTI  L+A+A+I+ L+IH+MDVKT
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT

Query:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK
        AFLNGDL+EEIYM QPEGF + GQENKVCKLRKSLYGLK APKQW+EKF+ TL+ NGF +N SD CVYSK   A  ++ICLYVDDMLIFGT+M  + +TK
Subjt:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTK

Query:  LFLSSHFEMKDLGEADIILGVRI
         FLSS+F+MKDLGEAD+ILG+RI
Subjt:  LFLSSHFEMKDLGEADIILGVRI

A0A5D3C5T2 Ty1-copia retrotransposon protein2.9e-11892.54Show/hide
Query:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK
        MWKEAIKSELDSL MNHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYKARLVVVGYTQKQG DYFDTYSPVTKITTI ALIALAAIH+LLIH+MDVK
Subjt:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK

Query:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT
        TAFLNG+LEEEIYMTQPEGFKISGQENKVCKLRKSLYGLK APKQWYEKFNNTLI NGFKINSSDTCVYSK+  ADCILICLYVDDMLIFGTNMELITDT
Subjt:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT

Query:  KLFLSSHFEMKDLGEADIILGVRIRKRK
        K FLSSHFEMKDLGEAD+ILGV+IRK K
Subjt:  KLFLSSHFEMKDLGEADIILGVRIRKRK

A0A5N6PGV2 Reverse transcriptase Ty1/copia-type domain-containing protein2.6e-9070.35Show/hide
Query:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK
        +WKEAIKSE+DS++ NHTW+L DLP GNKPI  KWIFK+K +P+G++++YKARLV+ G+TQK G DYFDTYSPVTKITTI +LI++AAI+ LLIH+MDVK
Subjt:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK

Query:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT
        TAFLNGDL+EEIYM QPEGF +SG E+KVCKLRKSLYGLK APK+WYEKF+ TL ++G+ +N+SD+CVYSK  +   +LICLYVDDMLIFG +M  I  T
Subjt:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT

Query:  KLFLSSHFEMKDLGEADIILGVRIRK
        K FLSS FEMKDLGEAD+ILGV+I++
Subjt:  KLFLSSHFEMKDLGEADIILGVRIRK

SwissProt top hitse value%identityAlignment
O13535 Transposon Ty1-H Gag-Pol polyprotein5.6e-1830.86Show/hide
Query:  EAIKSELDSLVMNHTWDLVDLPMGNKPIRCK------WIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIG-----ALIALAAIHSL
        +A   E++ L+M  TWD  D     K I  K      +IF RK   +G+   +KAR V  G  Q     + DTY P  +  T+        ++LA  ++ 
Subjt:  EAIKSELDSLVMNHTWDLVDLPMGNKPIRCK------WIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIG-----ALIALAAIHSL

Query:  LIHKMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGT
         I ++D+ +A+L  D++EE+Y+  P      G  +K+ +L+KSLYGLK +   WYE   + LIK   +    +   +S VF+   + ICL+VDDM++F  
Subjt:  LIHKMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGT

Query:  NMELITDTKLFLSSHFEMK--DLGEAD-----IILGVRIRKRK
        ++         L   ++ K  +LGE+D      ILG+ I+ ++
Subjt:  NMELITDTKLFLSSHFEMK--DLGEAD-----IILGVRIRKRK

P04146 Copia protein3.3e-4240.17Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT
        W+EAI +EL++  +N+TW +   P     +  +W+F  K    G+  RYKARLV  G+TQK   DY +T++PV +I++   +++L   ++L +H+MDVKT
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKT

Query:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVY--SKVFRADCILICLYVDDMLIFGTNMELITD
        AFLNG L+EEIYM  P+G  IS   + VCKL K++YGLK A + W+E F   L +  F  +S D C+Y   K    + I + LYVDD++I   +M  + +
Subjt:  AFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVY--SKVFRADCILICLYVDDMLIFGTNMELITD

Query:  TKLFLSSHFEMKDLGEADIILGVRIRKRK
         K +L   F M DL E    +G+RI  ++
Subjt:  TKLFLSSHFEMKDLGEADIILGVRIRKRK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-5850.44Show/hide
Query:  EAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKTAF
        +A++ E++SL  N T+ LV+LP G +P++CKW+FK K   +  + RYKARLVV G+ QK+G D+ + +SPV K+T+I  +++LAA   L + ++DVKTAF
Subjt:  EAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKTAF

Query:  LNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVF-RADCILICLYVDDMLIFGTNMELITDTKL
        L+GDLEEEIYM QPEGF+++G+++ VCKL KSLYGLK AP+QWY KF++ +    +    SD CVY K F   + I++ LYVDDMLI G +  LI   K 
Subjt:  LNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVF-RADCILICLYVDDMLIFGTNMELITDTKL

Query:  FLSSHFEMKDLGEADIILGVRIRKRK
         LS  F+MKDLG A  ILG++I + +
Subjt:  FLSSHFEMKDLGEADIILGVRIRKRK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.3e-4642.48Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK
        W+ A+ SE+++ + NHTWDLV  P  +  I  C+WIF +K   +GS+ RYKARLV  GY Q+ G DY +T+SPV K T+I  ++ +A   S  I ++DV 
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK

Query:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT
         AFL G L +++YM+QP GF    + N VCKLRK+LYGLK AP+ WY +  N L+  GF  + SDT ++        + + +YVDD+LI G +  L+ +T
Subjt:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT

Query:  KLFLSSHFEMKDLGEADIILGVRIRK
           LS  F +KD  E    LG+  ++
Subjt:  KLFLSSHFEMKDLGEADIILGVRIRK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.6e-4440.71Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK
        W++A+ SE+++ + NHTWDLV  P  +  I  C+WIF +K   +GS+ RYKARLV  GY Q+ G DY +T+SPV K T+I  ++ +A   S  I ++DV 
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK

Query:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT
         AFL G L +E+YM+QP GF    + + VC+LRK++YGLK AP+ WY +    L+  GF  + SDT ++        I + +YVDD+LI G +  L+  T
Subjt:  TAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDT

Query:  KLFLSSHFEMKDLGEADIILGVRIRK
           LS  F +K+  +    LG+  ++
Subjt:  KLFLSSHFEMKDLGEADIILGVRIRK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.6e-5242.17Show/hide
Query:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK
        +W  A+  E+ ++   HTW++  LP   KPI CKW++K K   +G+IERYKARLV  GYTQ++G D+ +T+SPV K+T++  ++A++AI++  +H++D+ 
Subjt:  MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVK

Query:  TAFLNGDLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMEL
         AFLNGDL+EEIYM  P G+      S   N VC L+KS+YGLK A +QW+ KF+ TLI  GF  + SD   + K+     + + +YVDD++I   N   
Subjt:  TAFLNGDLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMEL

Query:  ITDTKLFLSSHFEMKDLGEADIILGVRIRK
        + + K  L S F+++DLG     LG+ I +
Subjt:  ITDTKLFLSSHFEMKDLGEADIILGVRIRK

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)5.4e-1641.86Show/hide
Query:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALA
        W +A++ ELD+L  N TW LV  P+    + CKW+FK K   +G+++R KARLV  G+ Q++G  + +TYSPV +  TI  ++ +A
Subjt:  WKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAAAGAGGCCATTAAAAGTGAACTTGATTCATTGGTCATGAATCATACATGGGACTTAGTGGACCTTCCTATGGGAAACAAGCCAATTAGGTGTAAGTGGATCTT
CAAAAGAAAAACAAAACCAAATGGATCAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGGTATACCCAGAAACAAGGCAATGATTATTTTGACACATATTCCCCTG
TAACTAAGATAACCACAATTGGGGCCTTGATTGCATTAGCTGCAATACATAGCCTTCTTATTCACAAAATGGACGTAAAAACTGCTTTTCTAAATGGTGACTTAGAAGAA
GAAATTTATATGACACAACCAGAAGGCTTTAAAATTTCTGGCCAAGAAAACAAAGTGTGTAAACTGAGAAAATCCCTATACGGTCTCAAGCATGCTCCCAAGCAGTGGTA
TGAAAAGTTTAATAATACGTTGATAAAGAATGGATTTAAAATAAATTCCTCAGACACGTGTGTTTATTCAAAAGTGTTTAGAGCTGATTGCATATTAATATGTCTATATG
TTGATGACATGTTAATCTTTGGAACAAACATGGAGTTAATAACTGATACTAAGTTATTTCTCTCATCACACTTTGAAATGAAAGACCTAGGAGAAGCAGACATAATCCTA
GGTGTTAGAATCAGAAAAAGAAAACTAGTTTGTCCCTATGAAAATCTCACTACATGGATAAAATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAAAGAGGCCATTAAAAGTGAACTTGATTCATTGGTCATGAATCATACATGGGACTTAGTGGACCTTCCTATGGGAAACAAGCCAATTAGGTGTAAGTGGATCTT
CAAAAGAAAAACAAAACCAAATGGATCAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGGTATACCCAGAAACAAGGCAATGATTATTTTGACACATATTCCCCTG
TAACTAAGATAACCACAATTGGGGCCTTGATTGCATTAGCTGCAATACATAGCCTTCTTATTCACAAAATGGACGTAAAAACTGCTTTTCTAAATGGTGACTTAGAAGAA
GAAATTTATATGACACAACCAGAAGGCTTTAAAATTTCTGGCCAAGAAAACAAAGTGTGTAAACTGAGAAAATCCCTATACGGTCTCAAGCATGCTCCCAAGCAGTGGTA
TGAAAAGTTTAATAATACGTTGATAAAGAATGGATTTAAAATAAATTCCTCAGACACGTGTGTTTATTCAAAAGTGTTTAGAGCTGATTGCATATTAATATGTCTATATG
TTGATGACATGTTAATCTTTGGAACAAACATGGAGTTAATAACTGATACTAAGTTATTTCTCTCATCACACTTTGAAATGAAAGACCTAGGAGAAGCAGACATAATCCTA
GGTGTTAGAATCAGAAAAAGAAAACTAGTTTGTCCCTATGAAAATCTCACTACATGGATAAAATACTAA
Protein sequenceShow/hide protein sequence
MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKARLVVVGYTQKQGNDYFDTYSPVTKITTIGALIALAAIHSLLIHKMDVKTAFLNGDLEE
EIYMTQPEGFKISGQENKVCKLRKSLYGLKHAPKQWYEKFNNTLIKNGFKINSSDTCVYSKVFRADCILICLYVDDMLIFGTNMELITDTKLFLSSHFEMKDLGEADIIL
GVRIRKRKLVCPYENLTTWIKY