| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0045258.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-158 | 92.04 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
M NSATA VIGK KVILKLTSGKTLSLSNVLYVPSLRRNLVSG+LLNRA LKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMN NASS TYVIE V
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKDLRLINTS+SHETGKCPICVESKFHKKPFK V+SRT DLLELIHSDLADF+TTTSR GKNYYVSFVDDYSRFTKIYLIK K
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
DEAGSMFLKF AESENQLGKKIKRLR DRGGEYSDKTLKDFCESNG+ HEFTAPY PQQNGIAERKNRTLKEMMN MLLSSGLSDNMWGEAVLSACFVLN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RI HK +DKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| KAA0053084.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.6e-174 | 100 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHKSLDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| KAA0066784.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.5e-158 | 89.81 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATA VIGK KVILKLTSGKTLSLSNVLYVPSLRRNLVSG+LLNRA LKIVLEGDKVVLTKNG FVGKGYLSNGLFVLNTISMN NASSS Y+IE
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKD+RLINTS++HETGKCP+C+ESKFHKKPFKPVE RTT+LLELI+SDLADF+TT SRGGKNYYVSFVDDYSRFTKIYLIK K
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
+EA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLK+FCESNG+ HEFTAPY PQQNGIAERKNRTLKEMMN MLLSSGLSDNMWGEAVLSACF+LN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHK LDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 9.1e-159 | 90.13 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATA VIGK KVILKLTSGKTLSLSNVLYVPSLRRNLVSG+LLNRA LKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMN NASSS Y+IE
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKD+RLINTS++HETGKCPIC+ESKFHKKPFKPVE RTT+LLELIHSDLADF+TT SRGGKNYYVSFVDDYSRFTKIYLI+ K
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
+EA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLK+FCESNG+ HEFTAPY PQQNGIAERKNRTLKEMMN MLLSSGLSDNMWGEAVLSACF+LN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHK LDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| TYK29957.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.6e-174 | 100 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHKSLDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TQW7 Ty1-copia retrotransposon protein | 5.8e-159 | 92.04 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
M NSATA VIGK KVILKLTSGKTLSLSNVLYVPSLRRNLVSG+LLNRA LKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMN NASS TYVIE V
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKDLRLINTS+SHETGKCPICVESKFHKKPFK V+SRT DLLELIHSDLADF+TTTSR GKNYYVSFVDDYSRFTKIYLIK K
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
DEAGSMFLKF AESENQLGKKIKRLR DRGGEYSDKTLKDFCESNG+ HEFTAPY PQQNGIAERKNRTLKEMMN MLLSSGLSDNMWGEAVLSACFVLN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RI HK +DKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| A0A5A7UCV4 Ty1-copia retrotransposon protein | 7.5e-175 | 100 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHKSLDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| A0A5A7VHG8 Ty1-copia retrotransposon protein | 2.2e-158 | 89.81 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATA VIGK KVILKLTSGKTLSLSNVLYVPSLRRNLVSG+LLNRA LKIVLEGDKVVLTKNG FVGKGYLSNGLFVLNTISMN NASSS Y+IE
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKD+RLINTS++HETGKCP+C+ESKFHKKPFKPVE RTT+LLELI+SDLADF+TT SRGGKNYYVSFVDDYSRFTKIYLIK K
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
+EA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLK+FCESNG+ HEFTAPY PQQNGIAERKNRTLKEMMN MLLSSGLSDNMWGEAVLSACF+LN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHK LDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| A0A5D3BZI1 Ty1-copia retrotransposon protein | 4.4e-159 | 90.13 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATA VIGK KVILKLTSGKTLSLSNVLYVPSLRRNLVSG+LLNRA LKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMN NASSS Y+IE
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKD+RLINTS++HETGKCPIC+ESKFHKKPFKPVE RTT+LLELIHSDLADF+TT SRGGKNYYVSFVDDYSRFTKIYLI+ K
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
+EA SMF+KFKAESENQLGK+IKRLRSDRGGEYSDKTLK+FCESNG+ HEFTAPY PQQNGIAERKNRTLKEMMN MLLSSGLSDNMWGEAVLSACF+LN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHK LDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| A0A5D3E1H3 Ty1-copia retrotransposon protein | 7.5e-175 | 100 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIPHKSLDKTPYEL
RIPHKSLDKTPYEL
Subjt: RIPHKSLDKTPYEL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.2e-40 | 32.08 | Show/hide |
Query: VIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGY-LSNGLFVLNTISMNVNASSSTYVIEFVNLWHGRL
+ ++ I++L + ++L +VL+ NL+S L A + I + V ++KNG V K + N + V+N + ++NA LWH R
Subjt: VIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGY-LSNGLFVLNTISMNVNASSSTYVIEFVNLWHGRL
Query: GHVNFASIRKLK------DLRLINTSDSHETGKCPICVESKFHKKPFKPVESRT--TDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKI
GH++ + ++K D L+N + C C+ K + PFK ++ +T L ++HSD+ T + KNY+V FVD ++ + YLIK
Subjt: GHVNFASIRKLK------DLRLINTSDSHETGKCPICVESKFHKKPFKPVESRT--TDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKI
Query: KDEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVL
K + SMF F A+SE K+ L D G EY ++ FC G+++ T P+ PQ NG++ER RT+ E M+ + L + WGEAVL+A +++
Subjt: KDEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVL
Query: NRIPHKSL---DKTPYEL
NRIP ++L KTPYE+
Subjt: NRIPHKSL---DKTPYEL
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-52 | 36.63 | Show/hide |
Query: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
MGN++ +++ G + +K G TL L +V +VP LR NL+SG L+R + K LTK + KG L+ N +++ I V
Subjt: MGNSATAEVIGKRKVILKLTSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLFVLNTISMNVNASSSTYVIEFV
Query: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
+LWH R+GH++ ++ L LI+ + C C+ K H+ F+ R ++L+L++SD+ S GG Y+V+F+DD SR +Y++K K
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIK
Query: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
D+ +F KF A E + G+K+KRLRSD GGEY+ + +++C S+G+ HE T P PQ NG+AER NRT+ E + ML + L + WGEAV +AC+++N
Subjt: DEAGSMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLN
Query: RIP
R P
Subjt: RIP
|
|
| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 7.8e-20 | 28.8 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVL---TKNGEF--VGKGYLSNGLFVLNTISMNVNASSSTYVIEFVNLWHGRLGHVNFAS
TS K L N+ Y L + N+ + D VL K+G+F + K YL TI+ NVN S S + L H LGH NF S
Subjt: TSGKTLSLSNVLYVPSLRRNLVSGNLLNRARLKIVLEGDKVVL---TKNGEF--VGKGYLSNGLFVLNTISMNVNASSSTYVIEFVNLWHGRLGHVNFAS
Query: IRK-LKD--LRLINTSD----SHETGKCPICVESKF----HKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIKDEA
I+K LK + + SD + T +CP C+ K H K + + + + +H+D+ + +Y++SF D+ +RF +Y + + E
Subjt: IRK-LKD--LRLINTSD----SHETGKCPICVESKF----HKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIKDEA
Query: G--SMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLNR
++F A +NQ ++ ++ DRG EY++KTL F + G+T +T + +G+AER NRTL +L SGL +++W AV + + N
Subjt: G--SMFLKFKAESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLNR
Query: IPHKSLDKT
+ DK+
Subjt: IPHKSLDKT
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-26 | 28.15 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVSGNLL---NRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLF---VLNTISMNVNASSSTYVIEFVNLWHGRLGHVNFA
T + L+L N+LYVP++ +NL+S L N ++ +V G + +G + L+ + ++ +++ AS S+ + WH RLGH +
Subjt: TSGKTLSLSNVLYVPSLRRNLVSGNLL---NRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLF---VLNTISMNVNASSSTYVIEFVNLWHGRLGHVNFA
Query: SIRK-LKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIKDEAGSMFLKFKA
+ + + L + SH+ C C+ +K +K PF +T LE I+SD+ S YYV FVD ++R+T +Y +K K + F+ FK
Subjt: SIRK-LKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIKDEAGSMFLKFKA
Query: ESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLNRIPHKSLD-KTP
EN+ +I SD GGE+ L ++ +G++H + P+ P+ NG++ERK+R + E +L + + W A A +++NR+P L ++P
Subjt: ESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLNRIPHKSLD-KTP
Query: YE
++
Subjt: YE
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-29 | 29.8 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVSGNLL---NRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLF---VLNTISMNVNASSSTYVIEFVNLWHGRLGHVNFA
TS ++L L+ VLYVP++ +NL+S L NR ++ +V G + +G + L+ + ++ ++++ AS + + WH RLGH + A
Subjt: TSGKTLSLSNVLYVPSLRRNLVSGNLL---NRARLKIVLEGDKVVLTKNGEFVGKGYLSNGLF---VLNTISMNVNASSSTYVIEFVNLWHGRLGHVNFA
Query: SIRK-LKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIKDEAGSMFLKFKA
+ + + L + SH+ C C +K HK PF ++ LE I+SD+ S YYV FVD ++R+T +Y +K K + F+ FK+
Subjt: SIRK-LKDLRLINTSDSHETGKCPICVESKFHKKPFKPVESRTTDLLELIHSDLADFKTTTSRGGKNYYVSFVDDYSRFTKIYLIKIKDEAGSMFLKFKA
Query: ESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLNRIPHKSLD-KTP
EN+ +I L SD GGE+ L+D+ +G++H + P+ P+ NG++ERK+R + EM +L + + W A A +++NR+P L ++P
Subjt: ESENQLGKKIKRLRSDRGGEYSDKTLKDFCESNGVTHEFTAPYLPQQNGIAERKNRTLKEMMNVMLLSSGLSDNMWGEAVLSACFVLNRIPHKSLD-KTP
Query: YE
++
Subjt: YE
|
|
