| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.9e-94 | 79.07 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN EE+IYM QP FI QEQK+CKL KSIYGLKQ+SRSWNIRFDTAIKSYGFEQNVDEP VYKK +NS+VAFL+LYVD+ILLIGNDV YL D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
+KKWL QFQMKDLG+AQY+L IQIV NRKNKTLAMSQ SYIDK+LSRYK+QNSKKG LP+ +GIHLSKEQCPKTPQEVEDMRNIP++ A+GSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
T+P+ICYSVG+VS+Y
Subjt: TKPNICYSVGMVSKY
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-94 | 80.47 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN EE+IYM QP FI+ GQEQK+CKL KSIYGLKQ+SRSWNIRFDT IKSYGFEQNVDEP VYK+ INS VAFLVLYVD+ILLIGN+V +L D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
IK+WL QFQMKDLG AQYVL IQIV NRKNKTLAMSQTSYIDKMLSRYK+QNSKKGLLPY YGIHLSKEQCPKTPQEV+DM NIP+A A+GSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
+P+ICYSVG+VS+Y
Subjt: TKPNICYSVGMVSKY
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| KAA0061927.1 gag/pol protein [Cucumis melo var. makuwa] | 7.4e-91 | 78.14 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN E ++YMAQP FIK+GQEQK+CKL KSIY LKQ+SRSWNI+FDT IK+YGFEQNV+EP VYKK +NSIVAFLVLYVD+ILLIGNDVGYL D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
I+KWLA QFQMK LGDAQYVL IQIV NRKN+TL MSQ SYIDKMLSRYKIQ S KGLL Y YGIHLSK+QCPKTPQEVEDMR IP+A IGSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
T+P+IC+ V MVS+Y
Subjt: TKPNICYSVGMVSKY
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-95 | 82.24 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ TFLN N EE+IYM QP FI+ GQEQKICKL KSIYGLKQ+SRS NIRFDTAIKSYG EQNVDEP VYK+ +NS VAFLVLYVD+ILLIGNDVG+L D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
IKKWLAMQFQMKDLG+AQYVL +QIV NRKNKTLAMSQTSYIDKMLSRYK+ NSKKGLLPY YGIHLSKEQCPKTPQEVEDM NIP+A A+GSLMY M+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSK
T+PNICYSVG+VS+
Subjt: TKPNICYSVGMVSK
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 3.1e-97 | 82.33 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN EE+IYMAQP FIK GQEQKICK KSIYGLKQ+SRSWNIRFDTAIKSYGFEQNVD+P VYKK +NSIVAFLVLYVD+ILL+GNDVGYL D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
IKKWLA QFQMKD GDAQYVL IQIV NRKN+TLAMS+ SYIDKMLSRYK+QNSKKGLLPY YGIHLSKEQCPKTPQEVEDMR IP+AF +GSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
T+P+IC+ V MVS+Y
Subjt: TKPNICYSVGMVSKY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 1.5e-94 | 80.47 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN EE+IYM QP FI+ GQEQK+CKL KSIYGLKQ+SRSWNIRFDT IKSYGFEQNVDEP VYK+ INS VAFLVLYVD+ILLIGN+V +L D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
IK+WL QFQMKDLG AQYVL IQIV NRKNKTLAMSQTSYIDKMLSRYK+QNSKKGLLPY YGIHLSKEQCPKTPQEV+DM NIP+A A+GSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
+P+ICYSVG+VS+Y
Subjt: TKPNICYSVGMVSKY
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| A0A5A7V4T1 Gag/pol protein | 3.6e-91 | 78.14 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN E ++YMAQP FIK+GQEQK+CKL KSIY LKQ+SRSWNI+FDT IK+YGFEQNV+EP VYKK +NSIVAFLVLYVD+ILLIGNDVGYL D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
I+KWLA QFQMK LGDAQYVL IQIV NRKN+TL MSQ SYIDKMLSRYKIQ S KGLL Y YGIHLSK+QCPKTPQEVEDMR IP+A IGSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
T+P+IC+ V MVS+Y
Subjt: TKPNICYSVGMVSKY
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| A0A5D3BX45 Gag/pol protein | 1.8e-95 | 82.24 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ TFLN N EE+IYM QP FI+ GQEQKICKL KSIYGLKQ+SRS NIRFDTAIKSYG EQNVDEP VYK+ +NS VAFLVLYVD+ILLIGNDVG+L D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
IKKWLAMQFQMKDLG+AQYVL +QIV NRKNKTLAMSQTSYIDKMLSRYK+ NSKKGLLPY YGIHLSKEQCPKTPQEVEDM NIP+A A+GSLMY M+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSK
T+PNICYSVG+VS+
Subjt: TKPNICYSVGMVSK
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| A0A5D3CDT9 Gag/pol protein | 1.5e-97 | 82.33 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN EE+IYMAQP FIK GQEQKICK KSIYGLKQ+SRSWNIRFDTAIKSYGFEQNVD+P VYKK +NSIVAFLVLYVD+ILL+GNDVGYL D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
IKKWLA QFQMKD GDAQYVL IQIV NRKN+TLAMS+ SYIDKMLSRYK+QNSKKGLLPY YGIHLSKEQCPKTPQEVEDMR IP+AF +GSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
T+P+IC+ V MVS+Y
Subjt: TKPNICYSVGMVSKY
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| E2GK51 Gag/pol protein (Fragment) | 9.1e-95 | 79.07 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
+ FLNGN EE+IYM QP FI QEQK+CKL KSIYGLKQ+SRSWNIRFDTAIKSYGFEQNVDEP VYKK +NS+VAFL+LYVD+ILLIGNDV YL D
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLND
Query: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
+KKWL QFQMKDLG+AQY+L IQIV NRKNKTLAMSQ SYIDK+LSRYK+QNSKKG LP+ +GIHLSKEQCPKTPQEVEDMRNIP++ A+GSLMYAM+C
Subjt: IKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMIC
Query: TKPNICYSVGMVSKY
T+P+ICYSVG+VS+Y
Subjt: TKPNICYSVGMVSKY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.4e-23 | 31.53 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVY---KKFINSIVAFLVLYVDNILLIGNDVGY
+ FLNG +E IYM P +CKLNK+IYGLKQ++R W F+ A+K F + + +Y K IN + +++LYVD++++ D+
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVY---KKFINSIVAFLVLYVDNILLIGNDVGY
Query: LNDIKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLP----YIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGS
+N+ K++L +F+M DL + ++ + I+I + + + +SQ++Y+ K+LS++ ++N P Y + S E C N P IG
Subjt: LNDIKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLP----YIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGS
Query: LMYAMICTKPNICYSVGMVSKY
LMY M+CT+P++ +V ++S+Y
Subjt: LMYAMICTKPNICYSVGMVSKY
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| P0C2J7 Transposon Ty4-H Gag-Pol polyprotein | 9.6e-09 | 24.32 | Show/hide |
Query: FLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLNDIKK
FL EE IY+ P + + + KLNK++YGLKQS + WN + G + N P +Y+ +++ + +YVD+ ++ ++ L++
Subjt: FLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLNDIKK
Query: WLAMQFQMKDLGDA------QYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRY--KIQNSKKGLLPYI--YGIHLSKEQCPKTPQE
L F++K G +L + +V N++ T+ ++ S+I++M +Y +++ +K +P++ Y I K+ + +E
Subjt: WLAMQFQMKDLGDA------QYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRY--KIQNSKKGLLPYI--YGIHLSKEQCPKTPQE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-47 | 42.59 | Show/hide |
Query: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVY-KKFINSIVAFLVLYVDNILLIGNDVGYLN
+ FL+G+ EE IYM QP F G++ +CKLNKS+YGLKQ+ R W ++FD+ +KS + + +P VY K+F + L+LYVD++L++G D G +
Subjt: RQTFLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVY-KKFINSIVAFLVLYVDNILLIGNDVGYLN
Query: DIKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMI
+K L+ F MKDLG AQ +L ++IV R ++ L +SQ YI+++L R+ ++N+K P + LSK+ CP T +E +M +P++ A+GSLMYAM+
Subjt: DIKKWLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMI
Query: CTKPNICYSVGMVSKY
CT+P+I ++VG+VS++
Subjt: CTKPNICYSVGMVSKY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-19 | 29.72 | Show/hide |
Query: FLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLNDIKK
FL G + +YM+QP FI + +CKL K++YGLKQ+ R+W + + + GF +V + ++ + ++++YVD+IL+ GND L++
Subjt: FLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLNDIKK
Query: WLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMICTKP
L+ +F +KD + Y L I+ R L +SQ YI +L+R + +K P LS K E + +GSL Y + T+P
Subjt: WLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMICTKP
Query: NICYSVGMVSKY
+I Y+V +S++
Subjt: NICYSVGMVSKY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.4e-20 | 28.77 | Show/hide |
Query: FLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLNDIKK
FL G + +YM+QP F+ + +C+L K+IYGLKQ+ R+W + T + + GF ++ + ++ + ++++YVD+IL+ GND L
Subjt: FLNGNFEETIYMAQPVEFIKHGQEQKICKLNKSIYGLKQSSRSWNIRFDTAIKSYGFEQNVDEPYVYKKFINSIVAFLVLYVDNILLIGNDVGYLNDIKK
Query: WLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMICTKP
L+ +F +K+ D Y L I+ R + L +SQ Y +L+R + +K P L+ K P E + +GSL Y + T+P
Subjt: WLAMQFQMKDLGDAQYVLRIQIVLNRKNKTLAMSQTSYIDKMLSRYKIQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMRNIPHAFAIGSLMYAMICTKP
Query: NICYSVGMVSKY
++ Y+V +S+Y
Subjt: NICYSVGMVSKY
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