CuGenDBv2

Gene ID	Cmc04g0096491
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:10752916..10755174
RNA-Seq Expression	Cmc04g0096491
Synteny	Cmc04g0096491
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025917.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.46

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK                    SVDPAKVEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASK GLGGVLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
         RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

KAA0050760.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEA+HEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
         RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
         RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
         RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7TP01 Reverse transcriptase

0.0e+00

96.46

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK                    SVDPAKVEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASK GLGGVLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7U6G5 Reverse transcriptase

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEA+HEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3BTN0 Reverse transcriptase

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
         RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3C6W3 Reverse transcriptase

0.0e+00

94.01

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSK                    SVDPAK+EAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSK-------------------FSVDPAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA
         RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GLG VLMQQGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYA

Query:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

5.1e-99

30.98

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW
        M +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+             H+   KF  + +           ++ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----

Query:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR

Query:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT35 Transposon Tf2-2 polyprotein

5.1e-99

30.98

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW
        M +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+             H+   KF  + +           ++ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----

Query:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR

Query:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT36 Transposon Tf2-3 polyprotein

5.1e-99

30.98

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW
        M +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+             H+   KF  + +           ++ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----

Query:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR

Query:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT37 Transposon Tf2-4 polyprotein

5.1e-99

30.98

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW
        M +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+             H+   KF  + +           ++ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----

Query:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR

Query:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT41 Transposon Tf2-12 polyprotein

5.1e-99

30.98

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW
        M +G++ APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+             H+   KF  + +           ++ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLR------------AHKLYAKFSKFSVD-------PAKVEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGK-----

Query:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L      E +RV E       +I   DGL+   +  + +P D+ +
Subjt:  AHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMFEGR--LCVPEDSAV

Query:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR
           ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR
Subjt:  KTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDR

Query:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH
         +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H
Subjt:  LTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSH

Query:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG
        + L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Subjt:  LHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG

Query:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

4.5e-18

37.4

Show/hide

Query:  HLHQVLETLRAHKLYAKFSK---------------------FSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    H+ YA   K                      S DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRAHKLYAKFSK---------------------FSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV
        +     +F+ LK  + T PVL +PD    FV
Subjt:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGAT
CTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTTCTCGGTGGACCCAGCTA
AGGTCGAAGCGGTGACCAACTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATA
GCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCT
GACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCGAAGAATGGACTGGGAGGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCC
AGTTGAAGAATCATGAGCGGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATT
TACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAGGACTACGACTGCGAGATCCTGTACCA
TCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACGAAGCAGACCCCCTTACTCAGGGATTTGGAGAGAGCCGAGA
TTGCAGTCTCAGTAGGTGAGGTTGCCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTATCTGGCAGAG
AAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCGCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGAC
AGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATG
TAGCAGAGTTCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGT
GTGTCGATGGACTTTATCACGGGACTGCCCAAGACCTTGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATC
CACGTACACTGCCAGCAAGTGGGGGCAGTTATACATGACGGAAATAGTAAGACTGCACGGAGTACCAGTATCCATCGTGTCAGACAGGGATGCCCGTTTCACTTCGAAAT
TTTGGCAAGGGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATG
CTGCGGGCCTGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCCACCATTGGTATGGCTCCGTTTGA
GGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGA
TCCGAGCTCGTATGCTGACCGCACAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTTTGAAGGTAGCACCG
ATGAAGGGCGTTCTGAGGTTCGAGAAGAAGGGGAAGTTGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGATTGGCCCTGTGGCTTATCGTTTGGCCTTGCC
CCCATCCCTCTCAGCAGTGCATGACGTATTCCATGTCTCCATGTTGAGGAGGTCAGTGAGAACTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKFSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
ASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQI
YTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAE
KRRVVETEQGEGFSISADDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWES
VSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDM
LRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAP
MKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSVRT

Cmc04g0096491 (gene) of Melon (Charmono) v1.1 genome