| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-78 | 84.78 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G+VVSQPN YL L ETQVVIPDDGVEDPL YKQ MN VDKDQ VKAMDLEMESMYFN VWELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIW+MDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-78 | 84.24 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G++VSQPN YL L ETQVVIPDDGVEDPL Y Q MN VDKDQ VKAMDLEMESMYFNL+WELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIWKMDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-78 | 84.78 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G+VVSQPN YL L ETQVVIPDDGVEDPL YKQ MN VDKDQ VKAMDLEMESMYFN VWELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIW+MDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| KAA0066280.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-94 | 96.7 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPEEPIGYKWIYKRKRDSTRKVQTVKARLVA
MPRRCGKVVSQPNHYL LIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFN VWELVDLPEEPIGYKWIYKRKRDST KVQTVKARLVA
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPEEPIGYKWIYKRKRDSTRKVQTVKARLVA
Query: KGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
KGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDV TAFLNVNLEESIFMSQPEGLITQGHE+KVSKLNRFI G
Subjt: KGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-78 | 84.78 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G+VVSQPN YL L ETQVVIPDDGVEDPL YKQ MN VDKDQ VKAMDLEMESMYFN VWELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIW+MDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 1.0e-78 | 84.78 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G+VVSQPN YL L ETQVVIPDDGVEDPL YKQ MN VDKDQ VKAMDLEMESMYFN VWELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIW+MDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| A0A5A7UYE8 Gag/pol protein | 1.0e-78 | 84.78 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G+VVSQPN YL L ETQVVIPDDGVEDPL YKQ MN VDKDQ VKAMDLEMESMYFN VWELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIW+MDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| A0A5A7VGK3 Gag/pol protein | 5.8e-95 | 96.7 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPEEPIGYKWIYKRKRDSTRKVQTVKARLVA
MPRRCGKVVSQPNHYL LIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFN VWELVDLPEEPIGYKWIYKRKRDST KVQTVKARLVA
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPEEPIGYKWIYKRKRDSTRKVQTVKARLVA
Query: KGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
KGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDV TAFLNVNLEESIFMSQPEGLITQGHE+KVSKLNRFI G
Subjt: KGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| A0A5D3CYF4 Gag/pol protein | 1.0e-78 | 84.78 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G+VVSQPN YL L ETQVVIPDDGVEDPL YKQ MN VDKDQ VKAMDLEMESMYFN VWELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIW+MDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| A0A5D3CZY3 Gag/pol protein | 1.0e-78 | 84.24 | Show/hide |
Query: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
MPRR G++VSQPN YL L ETQVVIPDDGVEDPL Y Q MN VDKDQ VKAMDLEMESMYFNL+WELVDLPE +PIG KWIYKRKRDS KVQT KARL
Subjt: MPRRCGKVVSQPNHYLDLIETQVVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPE--EPIGYKWIYKRKRDSTRKVQTVKARL
Query: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
VAKGYT+REGVDYEETFSPV MLKSIRILL IATFYDYEIWKMDV TAFLN NLEESIFMSQPEG ITQG EQKV KLNR I G
Subjt: VAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.5e-18 | 33.55 | Show/hide |
Query: PLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPEEP--IGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFI
P + ++ DK +A++ E+ + N W + PE + +W++ K + KARLVA+G+T++ +DYEETF+PV + S R +L +
Subjt: PLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLPEEP--IGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFI
Query: ATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
Y+ ++ +MDV TAFLN L+E I+M P+G+ + V KLN+ I G
Subjt: ATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-30 | 43.21 | Show/hide |
Query: VVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLP--EEPIGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTM
V+I DD +P K+V+++ +K+Q +KAM EMES+ N ++LV+LP + P+ KW++K K+D K+ KARLV KG+ +++G+D++E FSPV
Subjt: VVIPDDGVEDPLFYKQVMNYVDKDQRVKAMDLEMESMYFNLVWELVDLP--EEPIGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTM
Query: LKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
+ SIR +L +A D E+ ++DV TAFL+ +LEE I+M QPEG G + V KLN+ + G
Subjt: LKSIRILLFIATFYDYEIWKMDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 3.6e-09 | 39.29 | Show/hide |
Query: KAMDLEMESMYFNLVWELVDLP--EEPIGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFIA
+AM E++++ N W LV P + +G KW++K K S + +KARLVAKG+ + EG+ + ET+SPV +IR +L +A
Subjt: KAMDLEMESMYFNLVWELVDLP--EEPIGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-20 | 40.85 | Show/hide |
Query: KDQRVK-AMDLEMESMYFNLVWELVDLPEEP---IGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWK
KD+R + AM E+ + N W+LV P +G +WI+ +K +S + KARLVAKGY +R G+DY ETFSPV SIRI+L +A + I +
Subjt: KDQRVK-AMDLEMESMYFNLVWELVDLPEEP---IGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWK
Query: MDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
+DV AFL L + ++MSQP G I + V KL + + G
Subjt: MDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.7e-20 | 40.14 | Show/hide |
Query: KDQRVK-AMDLEMESMYFNLVWELVDLPEEP---IGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWK
KD R + AM E+ + N W+LV P +G +WI+ +K +S + KARLVAKGY +R G+DY ETFSPV SIRI+L +A + I +
Subjt: KDQRVK-AMDLEMESMYFNLVWELVDLPEEP---IGYKWIYKRKRDSTRKVQTVKARLVAKGYTEREGVDYEETFSPVTMLKSIRILLFIATFYDYEIWK
Query: MDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
+DV AFL L + ++MSQP G + + V +L + I G
Subjt: MDVMTAFLNVNLEESIFMSQPEGLITQGHEQKVSKLNRFIMG
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