; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0096811 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0096811
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:11381242..11382327
RNA-Seq ExpressionCmc04g0096811
SyntenyCmc04g0096811
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043070.1 reverse transcriptase [Cucumis melo var. makuwa]3.0e-19895.57Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +V+T+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELESGTVPISRAPYRMAP +LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGH+EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE VTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVW+KACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSD SKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

KAA0047433.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.1e-19996.12Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

KAA0048687.1 pol protein [Cucumis melo var. makuwa]5.2e-19895.84Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+E DVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

KAA0051051.1 reverse transcriptase [Cucumis melo var. makuwa]1.8e-19895.84Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIK+GDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

KAA0053368.1 pol protein [Cucumis melo var. makuwa]3.0e-19895.57Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM+LMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA +LT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

TrEMBL top hitse value%identityAlignment
A0A5A7TIB4 Reverse transcriptase1.5e-19895.57Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +V+T+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELESGTVPISRAPYRMAP +LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGH+EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE VTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVW+KACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSD SKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

A0A5A7TV57 Ty3-gypsy retrotransposon protein2.9e-19996.12Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

A0A5A7U330 Reverse transcriptase2.5e-19895.84Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+E DVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

A0A5A7UC07 Reverse transcriptase8.6e-19995.84Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIK+GDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

A0A5A7UE75 Reverse transcriptase1.5e-19895.57Show/hide
Query:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +VDT+EVDVSLSSEP+VRDYPDVFPEELPGLPPH+EVEFAIELE GTVPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Subjt:  MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM+LMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT
        FIDDI IYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRI 
Subjt:  FIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIT

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM
        TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA +LT+PDGSGSFVIYSDASKKGLGCVLM
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVLM

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.0e-6337.01Show/hide
Query:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P K +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI I+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT

Query:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN
        L +  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++T PL  L +K   + W+     + +N
Subjt:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL
        +KQ LV+  VL   D S   ++ +DAS   +G VL
Subjt:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL

P0CT35 Transposon Tf2-2 polyprotein3.0e-6337.01Show/hide
Query:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P K +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI I+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT

Query:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN
        L +  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++T PL  L +K   + W+     + +N
Subjt:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL
        +KQ LV+  VL   D S   ++ +DAS   +G VL
Subjt:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL

P0CT36 Transposon Tf2-3 polyprotein3.0e-6337.01Show/hide
Query:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P K +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI I+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT

Query:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN
        L +  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++T PL  L +K   + W+     + +N
Subjt:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL
        +KQ LV+  VL   D S   ++ +DAS   +G VL
Subjt:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL

P0CT41 Transposon Tf2-12 polyprotein3.0e-6337.01Show/hide
Query:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P K +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI I+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQT

Query:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN
        L +  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++T PL  L +K   + W+     + +N
Subjt:  LWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL
        +KQ LV+  VL   D S   ++ +DAS   +G VL
Subjt:  LKQKLVTASVLTLPDGSGSFVIYSDASKKGLGCVL

P20825 Retrovirus-related Pol polyprotein from transposon 2973.5e-6438.36Show/hide
Query:  PISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSG
        PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G
Subjt:  PISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSG

Query:  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLK
        +HQ+ + +  + KTAF ++ GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI I+S +  EH   +++V   L D  L  +  KCEF  K
Subjt:  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLK

Query:  QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTASVLTLPDGS
        + +FLGH+V+  G+  +P K++A+ S+  P+   E+R+FLGL GYYR+F+ N++ I  P+T   +K       K    ++F+ LK  ++   +L LPD  
Subjt:  QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTASVLTLPDGS

Query:  GSFVIYSDASKKGLGCVL
          FV+ +DAS   LG VL
Subjt:  GSFVIYSDASKKGLGCVL

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.1e-2645.04Show/hide
Query:  HLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+  W  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTASVLTLPDGSGSFV
        ++    +F+ LK  + T  VL LPD    FV
Subjt:  SKACEDSFQNLKQKLVTASVLTLPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATACTAAAGAGGTCGATGTATCCCTGTCATCAGAACCATTGGTGAGGGACTATCCGGATGTTTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAAAGAGGT
TGAGTTTGCCATAGAGTTGGAGTCGGGCACGGTTCCTATATCCAGAGCCCCATATAGAATGGCCCCCGAAGAGCTGAAAGAACTGAAAGTGCAGTTACAAGAATTGCTTG
ATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTACAGGGAGTTGAATAAG
GTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAAGGAGCTACAGTGTTCTCTAAGATTGATCTTCAGTCGGGATATCATCAGTT
GAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATACGGACACTATGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCTCCGGCAGTGTTTATGG
ACTTGATGAATAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTCATATACTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGT
ATGGTTTTGCAAACACTTTGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGT
TTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGAAGGTTTGTGG
AGAACTTTTCTCGTATAACTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTA
GTTACCGCATCGGTTCTTACTTTACCTGATGGTTCAGGCAGTTTTGTGATTTATAGTGATGCTTCCAAAAAAGGTTTGGGTTGTGTATTGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATACTAAAGAGGTCGATGTATCCCTGTCATCAGAACCATTGGTGAGGGACTATCCGGATGTTTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAAAGAGGT
TGAGTTTGCCATAGAGTTGGAGTCGGGCACGGTTCCTATATCCAGAGCCCCATATAGAATGGCCCCCGAAGAGCTGAAAGAACTGAAAGTGCAGTTACAAGAATTGCTTG
ATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTACAGGGAGTTGAATAAG
GTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAAGGAGCTACAGTGTTCTCTAAGATTGATCTTCAGTCGGGATATCATCAGTT
GAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATACGGACACTATGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCTCCGGCAGTGTTTATGG
ACTTGATGAATAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTCATATACTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGT
ATGGTTTTGCAAACACTTTGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGT
TTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGAAGGTTTGTGG
AGAACTTTTCTCGTATAACTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTA
GTTACCGCATCGGTTCTTACTTTACCTGATGGTTCAGGCAGTTTTGTGATTTATAGTGATGCTTCCAAAAAAGGTTTGGGTTGTGTATTGATGTAG
Protein sequenceShow/hide protein sequence
MVDTKEVDVSLSSEPLVRDYPDVFPEELPGLPPHKEVEFAIELESGTVPISRAPYRMAPEELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
VTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEAEHEEHLR
MVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKL
VTASVLTLPDGSGSFVIYSDASKKGLGCVLM