| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043008.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.4e-61 | 85.82 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLSEEVYVAQPKGF+D H DHVYKLRK LY LKQAPRAWYERL TYLLQQ Y RGSADQTMF+YRQGT+ LIVQIYVDDIIF GTSS Y
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
VEQFV QMKGEF+MSM+GEL+FFLGFQI QE TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| KAA0045100.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.7e-62 | 84.4 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYL+EEVY+AQPKGF+DLVH D+VYKLRK LYGLKQAPRAWY+RL TYLL+QGY+RG ADQTMF+YRQGTE LIVQIYV+DIIF GTSSAY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
VEQFVD+MK EF+MSM+GEL+ FLGFQIKQ+KTGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| KAA0063048.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.5e-64 | 88.65 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLS EVYV QPKGF+D VHHDHVYKLRK LYGLKQA RAWYERL TYLLQQGYRRGSADQTMF+YRQGTE LIVQIYVDDIIF GTSSAY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
V+QFV+QMK EF MSM+GELSFFLGFQIKQE+TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| KAA0068157.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 9.1e-58 | 82.27 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLSEEVY A K F+D VH DHVYKLRK LYGLKQA RAW ERLFTYLLQQGYRRG A+QTMF+YRQ TE LIVQIYVDDIIF GTS AY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
V++FV QMKGEF MSM+GEL+FFLGFQI+QE+TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| TYK16303.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.5e-64 | 88.65 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLS EVYV QPKGF+D VHHDHVYKLRK LYGLKQA RAWYERL TYLLQQGYRRGSADQTMF+YRQGTE LIVQIYVDDIIF GTSSAY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
V+QFV+QMK EF MSM+GELSFFLGFQIKQE+TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJM5 Gag-pol polyprotein | 6.6e-62 | 85.82 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLSEEVYVAQPKGF+D H DHVYKLRK LY LKQAPRAWYERL TYLLQQ Y RGSADQTMF+YRQGT+ LIVQIYVDDIIF GTSS Y
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
VEQFV QMKGEF+MSM+GEL+FFLGFQI QE TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| A0A5A7V603 Gag-pol polyprotein | 3.2e-64 | 88.65 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLS EVYV QPKGF+D VHHDHVYKLRK LYGLKQA RAWYERL TYLLQQGYRRGSADQTMF+YRQGTE LIVQIYVDDIIF GTSSAY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
V+QFV+QMK EF MSM+GELSFFLGFQIKQE+TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| A0A5A7VLN8 Gag-pol polyprotein | 4.4e-58 | 82.27 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLSEEVY A K F+D VH DHVYKLRK LYGLKQA RAW ERLFTYLLQQGYRRG A+QTMF+YRQ TE LIVQIYVDDIIF GTS AY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
V++FV QMKGEF MSM+GEL+FFLGFQI+QE+TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| A0A5D3BDC9 Putative gag-pol polyprotein | 2.3e-62 | 84.4 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYL+EEVY+AQPKGF+DLVH D+VYKLRK LYGLKQAPRAWY+RL TYLL+QGY+RG ADQTMF+YRQGTE LIVQIYV+DIIF GTSSAY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
VEQFVD+MK EF+MSM+GEL+ FLGFQIKQ+KTGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| A0A5D3CWQ1 Gag-pol polyprotein | 3.2e-64 | 88.65 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDVKSAFLNGYLS EVYV QPKGF+D VHHDHVYKLRK LYGLKQA RAWYERL TYLLQQGYRRGSADQTMF+YRQGTE LIVQIYVDDIIF GTSSAY
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
V+QFV+QMK EF MSM+GELSFFLGFQIKQE+TGIFFSQEK
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.6e-18 | 35.46 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQG--TELLIVQIYVDDIIFRGTSS
MDVK+AFLNG L EE+Y+ P+G + D+V KL K +YGLKQA R W+E L + + S D+ +++ +G E + V +YVDD++
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQG--TELLIVQIYVDDIIFRGTSS
Query: AYVEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQ
+ F + +FRM+ + E+ F+G +I+ ++ I+ SQ
Subjt: AYVEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQ
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-18 | 36.11 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYR-QGTELLIVQIYVDDIIFRGTSSA
+DVK+AFL+G L EE+Y+ QP+GF V KL K+LYGLKQAPR WY + +++ Q Y + +D ++ R +I+ +YVDD++ G
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYR-QGTELLIVQIYVDDIIFRGTSSA
Query: YVEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTG--IFFSQEK
+ + + F M +G LG +I +E+T ++ SQEK
Subjt: YVEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTG--IFFSQEK
|
|
| P25600 Putative transposon Ty5-1 protein YCL074W | 2.0e-15 | 31.34 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
MDV +AFLN + E +YV QP GF++ + D+V++L +YGLKQAP W E + L + G+ R + ++ + + +YVDD++ S
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTG
++ ++ + M +G++ FLG I Q G
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTG
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.9e-26 | 41.13 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
+DV +AFL G L+++VY++QP GFID ++V KLRK LYGLKQAPRAWY L YLL G+ +D ++F+ ++G ++ + +YVDDI+ G
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
+ +D + F + EL +FLG + K+ TG+ SQ +
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.6e-27 | 39.72 | Show/hide |
Query: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
+DV +AFL G L++EVY++QP GF+D D+V +LRK +YGLKQAPRAWY L TYLL G+ +D ++F+ ++G ++ + +YVDDI+ G +
Subjt: MDVKSAFLNGYLSEEVYVAQPKGFIDLVHHDHVYKLRKTLYGLKQAPRAWYERLFTYLLQQGYRRGSADQTMFMYRQGTELLIVQIYVDDIIFRGTSSAY
Query: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
++ +D + F + +L +FLG + K+ G+ SQ +
Subjt: VEQFVDQMKGEFRMSMIGELSFFLGFQIKQEKTGIFFSQEK
|
|
