; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0096851 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0096851
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPol
Genome locationCMiso1.1chr04:11440509..11442068
RNA-Seq ExpressionCmc04g0096851
SyntenyCmc04g0096851
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW50867.1 Copia protein [Vitis vinifera]2.4e-22067.54Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLA+YSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

RVW51051.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.1e-22067.72Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPG+DYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLKEGY NNPICPC+FIKKL++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSSSPT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F   GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

RVW51062.1 Copia protein [Vitis vinifera]1.4e-22067.54Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYL+AIGALMYLAN TRPDIAFSVNLLARYSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

RVW59049.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.2e-22167.72Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

RVX16158.1 Copia protein [Vitis vinifera]1.8e-22067.54Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLK+GY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

TrEMBL top hitse value%identityAlignment
A0A2N9IR78 Reverse transcriptase Ty1/copia-type domain-containing protein8.8e-22168.3Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENE-DYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFK
        EE QV  +N+EISI+Y   G+ W+R  +VVDNIF++ VA +I   N+ + EP+ V++CR R DWPKWKE IQAELNSL KREVFGP+V TP+GV PVG+K
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENE-DYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFK

Query:  WVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELC
        WVFVRKRNE NE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISLVV ENLDM LMDVVTAYLYGSL+N+IYMK+PEG+K+PE+YNS SR + 
Subjt:  WVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELC

Query:  SIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL----------------
        SIKLQRSLYGLKQS RMWYN LSEYLLKEG++NNPICPCVFIKK +SGFAI+AVYVDDLN++GT EE++K  +YLK EFEMK+L                
Subjt:  SIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL----------------

Query:  --------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHV
                                                    E  EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+PT RHWNGVKHV
Subjt:  --------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHV

Query:  FRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFS
         RYLRGT DMGLFY NKSN  LVGYADAGYLS+PHKGRSQTGYLFTCG TAISWRSVKQT++ATSSNH+EI+AIHEASRECVWLRS+  HIRE CGLS  
Subjt:  FRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFS

Query:  KNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
        K+ PTIL+EDN ACITQI+GGYIKGDRTKHISPK FY H+L+++GDI V+QI S +NLAD+ TK+LPT+TF
Subjt:  KNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

A0A438ET65 Copia protein1.1e-22067.54Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLA+YSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

A0A438ETU3 Copia protein6.7e-22167.54Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYL+AIGALMYLAN TRPDIAFSVNLLARYSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

A0A438FGC5 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-22167.72Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

A0A438K4P3 Copia protein8.8e-22167.54Show/hide
Query:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW
        EE QV  +N EIS++Y   G++W+R N+V++NIFA+ VA +II  +ED EP+ V+ECR+R DWPKWKE IQAELNSLTKREVFGPVV TP+ VKPVG+KW
Subjt:  EETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKW

Query:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS
        VFVRKRNENNE+ RYKARLV QGFSQRPGIDYEETYS ++DAIT R+LISL V E LDM LMDV+TAYLYGS++N+IYMK+PEGFK+P++ N+  R + S
Subjt:  VFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCS

Query:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------
        IKLQRSLYGLKQS RMWYN LSEYLLK+GY NNPICPC+FIKK ++GFAIIAVYVDDLN++GT EE+++   YLKKEFEMK+L                 
Subjt:  IKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNL-----------------

Query:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF
                                                   E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+PT+RHWNG+KH+ 
Subjt:  -------------------------------------------EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVF

Query:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK
        RYLRGT DMGLFYS +S   L+GYADAGYLS+PHKGRSQTGY+F C GTAISWRSVKQTM ATSSNH+EILAIHEASREC+WLRSM  HIRE+CGLS  K
Subjt:  RYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSK

Query:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
          PT LFEDN ACI QI GGYIKGDRTKHISPK FY H+L+++G+I VQQI S DNLADL TK+LPTSTF
Subjt:  NLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-6430.82Show/hide
Query:  QVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNII-------HENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPV
        ++ IDN   +    +I +R  R+        +YN   N +       H   +  P   DE + R D   W+E I  ELN+      +  +   P+    V
Subjt:  QVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNII-------HENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPV

Query:  GFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSR
          +WVF  K NE     RYKARLV +GF+Q+  IDYEET++ +    + R+++SLV+  NL +H MDV TA+L G+L+ EIYM++P+G       + NS 
Subjt:  GFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSR

Query:  ELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFI--KKLQSGFAIIAVYVDDLNI-IGTLEEISKAIEYLKKEFEMKNLED--------
         +C  KL +++YGLKQ+ R W+    + L +  + N+ +  C++I  K   +    + +YVDD+ I  G +  ++    YL ++F M +L +        
Subjt:  ELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFI--KKLQSGFAIIAVYVDDLNI-IGTLEEISKAIEYLKKEFEMKNLED--------

Query:  ---------------------------------------NEELLGPE----VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRY
                                               N ELL  +     P  S IG LMY+   TRPD+  +VN+L+RYSS      W  +K V RY
Subjt:  ---------------------------------------NEELLGPE----VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRY

Query:  LRGTIDMGLFYSNKSNFD--LVGYADAGYLSNPHKGRSQTGYLFTC-GGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFS
        L+GTIDM L +     F+  ++GY D+ +  +    +S TGYLF       I W + +Q   A SS  AE +A+ EA RE +WL+ +         ++  
Subjt:  LRGTIDMGLFYSNKSNFD--LVGYADAGYLSNPHKGRSQTGYLFTC-GGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFS

Query:  KNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
           P  ++EDN  CI+ I        R KHI  K  +  +  +N  I ++ I +++ LAD+ TK LP + F
Subjt:  KNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

P0CV72 Secreted RxLR effector protein 1613.8e-2744.2Show/hide
Query:  VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISW
        VPYLSA+GA+MYL   TRPD+A +V +L++++S P   HW  +K V RYL+ T   GL ++      LVGY+DA +  +    RS +GYLF   G  +SW
Subjt:  VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISW

Query:  RSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIR
        RS KQ   A SS   E +A+ EA++E VWL   T   +
Subjt:  RSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIR

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.1e-7032.64Show/hide
Query:  NEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITL
        ++D EP+ + E  +  +  +  + +Q E+ SL K   +  +V  PKG +P+  KWVF  K++ + ++ RYKARLVV+GF Q+ GID++E +S +V   ++
Subjt:  NEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITL

Query:  RYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKL-
        R ++SL    +L++  +DV TA+L+G LE EIYM+ PEGF++          +C  KL +SLYGLKQ+ R WY     ++  + Y      PCV+ K+  
Subjt:  RYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKL-

Query:  QSGFAIIAVYVDDLNIIGTLEE-ISKAIEYLKKEFEMKNLEDNEELLG----------------------------------------------------
        ++ F I+ +YVDD+ I+G  +  I+K    L K F+MK+L   +++LG                                                    
Subjt:  QSGFAIIAVYVDDLNIIGTLEE-ISKAIEYLKKEFEMKNLEDNEELLG----------------------------------------------------

Query:  --------PEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYL
                 +VPY SA+G+LMY    TRPDIA +V +++R+  +P K HW  VK + RYLRGT    L +   S+  L GY DA    +    +S TGYL
Subjt:  --------PEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYL

Query:  FTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEEN
        FT  G AISW+S  Q   A S+  AE +A  E  +E +WL+     +    GL   +    +++ D+ + I   K       RTKHI  +  +  ++ ++
Subjt:  FTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEEN

Query:  GDISVQQISSKDNLADLLTKALPTSTF
          + V +IS+ +N AD+LTK +P + F
Subjt:  GDISVQQISSKDNLADLLTKALPTSTF

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.3e-5628.57Show/hide
Query:  QVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFV
        Q+  +NN+  +N   +G R  +  ++  N   Y++A ++  E+   EP+   +    KD  +W+  + +E+N+      +  V   P  V  VG +W+F 
Subjt:  QVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFV

Query:  RKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKL
        +K N +  + RYKARLV +G++QRPG+DY ET+S ++ + ++R ++ + V  +  +  +DV  A+L G+L +++YM  P GF   +  N     +C  KL
Subjt:  RKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKL

Query:  QRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEE-ISKAIEYLKKEFEMKNLEDNEELLGPE---VP----
        +++LYGLKQ+ R WY  L  YLL  G+ N+     +F+ +       + VYVDD+ I G     +   ++ L + F +K+ E+    LG E   VP    
Subjt:  QRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEE-ISKAIEYLKKEFEMKNLEDNEELLGPE---VP----

Query:  ---------------------------------------------YLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMG
                                                     Y   +G+L YLA  TRPDI+++VN L+++   PT+ H   +K + RYL GT + G
Subjt:  ---------------------------------------------YLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMG

Query:  LFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDN
        +F    +   L  Y+DA +  +     S  GY+   G   ISW S KQ     SS  AE  ++   S E  W+ S+   +    G+  ++  P +++ DN
Subjt:  LFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDN

Query:  TACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF
            T +    +   R KHI+    +  +  ++G + V  +S+ D LAD LTK L  + F
Subjt:  TACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.1e-5831.14Show/hide
Query:  KWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDV
        +W++ + +E+N+      +  V   P  V  VG +W+F +K N +  + RYKARLV +G++QRPG+DY ET+S ++ + ++R ++ + V  +  +  +DV
Subjt:  KWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDV

Query:  VTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAII--AVYVDDLNIIG
          A+L G+L +E+YM  P GF          R     +L++++YGLKQ+ R WY  L  YLL  G+ N+     +F+  LQ G +II   VYVDD+ I G
Subjt:  VTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAII--AVYVDDLNIIG

Query:  TLEEISK-AIEYLKKEFEMKNLEDNEELLGPE---VP-------------------------------------------------YLSAIGALMYLANN
            + K  ++ L + F +K  ED    LG E   VP                                                 Y   +G+L YLA  
Subjt:  TLEEISK-AIEYLKKEFEMKNLEDNEELLGPE---VP-------------------------------------------------YLSAIGALMYLANN

Query:  TRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAE
        TRPD++++VN L++Y   PT  HWN +K V RYL GT D G+F    +   L  Y+DA +  +     S  GY+   G   ISW S KQ     SS  AE
Subjt:  TRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAE

Query:  ILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTST
          ++   S E  W+ S+   +    G+  S   P +++ DN    T +    +   R KHI+    +  +  ++G + V  +S+ D LAD LTK L    
Subjt:  ILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTST

Query:  F
        F
Subjt:  F

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.4e-5329.96Show/hide
Query:  EPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLI
        EP   +E    K++  W   +  E+ ++     +  +   P   KP+G KWV+  K N +  + RYKARLV +G++Q+ GID+ ET+S +    +++ ++
Subjt:  EPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLI

Query:  SLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFA
        ++    N  +H +D+  A+L G L+ EIYMK+P G+   +  +     +C +K  +S+YGLKQ+ R W+   S  L+  G+  +      F+K   + F 
Subjt:  SLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFA

Query:  IIAVYVDDLNIIGTLE-EISKAIEYLKKEFEMKNLEDNEELLGPEV----------------------------------------------------PY
         + VYVDD+ I    +  + +    LK  F++++L   +  LG E+                                                     Y
Subjt:  IIAVYVDDLNIIGTLE-EISKAIEYLKKEFEMKNLEDNEELLGPEV----------------------------------------------------PY

Query:  LSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSV
           IG LMYL   TR DI+F+VN L+++S +P   H   V  +  Y++GT+  GLFYS+++   L  ++DA + S     RS  GY    G + ISW+S 
Subjt:  LSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSV

Query:  KQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHI
        KQ + + SS  AE  A+  A+ E +WL      ++    L  SK  PT+LF DNTA I  I    +  +RTKHI
Subjt:  KQTMTATSSNHAEILAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHI

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.3e-1041.77Show/hide
Query:  MYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGY
        MYL   TRPD+ F+VN L+++SS+        V  V  Y++GT+  GLFYS  S+  L  +AD+ + S P   RS TG+
Subjt:  MYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.9e-1332.28Show/hide
Query:  YLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRS
        + S +GAL YL   TRPDI+++VN++ +    PT   ++ +K V RY++GTI  GL+    S  ++  + D+ +       RS TG+    G   ISW +
Subjt:  YLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRS

Query:  VKQTMTATSSNHAEILAIHEASRECVW
         +Q   + SS   E  A+   + E  W
Subjt:  VKQTMTATSSNHAEILAIHEASRECVW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.1e-0936.36Show/hide
Query:  PKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISL
        P W + +Q EL++L++ + +  +V  P     +G KWVF  K + +  + R KARLV +GF Q  GI + ETYS +V   T+R ++++
Subjt:  PKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGACTAGTGGTAAAAATGTAGAAGAGACTCAAGTATATATAGATAACAATGAGATCTCGATAAATTATACCATGATAGGAAAAAGGTGGAATAGAATTAATGT
AGTTGTGGACAACATTTTTGCGTATAATGTTGCACAAAATATCATTCATGAAAATGAGGATTATGAACCTAAATTTGTTGACGAATGTCGTAATAGAAAGGATTGGCCCA
AGTGGAAAGAAGTCATCCAAGCAGAACTAAACTCACTCACGAAACGTGAAGTTTTTGGACCTGTAGTTTATACACCTAAAGGTGTAAAACCTGTGGGATTTAAATGGGTA
TTTGTGCGTAAACGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGTACAAGGATTCTCTCAAAGACCAGGCATTGATTATGAGGAAACATATTCTTC
TTTGGTGGATGCTATTACATTAAGATATTTAATTAGTTTGGTTGTATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTACAGCATACTTATATGGATCTTTGGAAA
ATGAAATCTATATGAAAATGCCTGAAGGATTTAAGATACCTGAATCATATAATTCAAACTCTAGAGAATTATGTTCAATCAAATTACAAAGATCATTATATGGATTGAAA
CAATCAAGACGAATGTGGTACAATTGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATATGTCCATGTGTTTTTATTAAGAAATTACAGTCAGGATT
TGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCTTGAAGAGATTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAAATCTAGAAG
ATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAGCATTTTCAGTAAATTTGTTA
GCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAGCATGTATTTCGTTATCTTCGAGGGACAATTGATATGGGTTTGTTTTATTCAAATAAATCAAA
CTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATCTAATCCACACAAAGGAAGATCTCAAACAGGTTATTTGTTTACATGTGGAGGAACTGCTATATCTTGGCGAT
CTGTAAAGCAAACCATGACGGCCACTTCATCGAATCATGCAGAAATTCTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTCAATGACTCATCATATTCGA
GAAACATGTGGTTTGTCTTTCAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAACACAAATCAAAGGAGGGTATATAAAAGGAGATAGAACAAA
GCATATCTCACCAAAACTCTTCTATAAACATGACCTTGAAGAAAATGGTGACATCAGTGTTCAACAAATTTCTTCAAAAGACAACTTGGCGGACTTATTAACAAAAGCAT
TACCCACATCAACATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGACTAGTGGTAAAAATGTAGAAGAGACTCAAGTATATATAGATAACAATGAGATCTCGATAAATTATACCATGATAGGAAAAAGGTGGAATAGAATTAATGT
AGTTGTGGACAACATTTTTGCGTATAATGTTGCACAAAATATCATTCATGAAAATGAGGATTATGAACCTAAATTTGTTGACGAATGTCGTAATAGAAAGGATTGGCCCA
AGTGGAAAGAAGTCATCCAAGCAGAACTAAACTCACTCACGAAACGTGAAGTTTTTGGACCTGTAGTTTATACACCTAAAGGTGTAAAACCTGTGGGATTTAAATGGGTA
TTTGTGCGTAAACGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGTACAAGGATTCTCTCAAAGACCAGGCATTGATTATGAGGAAACATATTCTTC
TTTGGTGGATGCTATTACATTAAGATATTTAATTAGTTTGGTTGTATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTACAGCATACTTATATGGATCTTTGGAAA
ATGAAATCTATATGAAAATGCCTGAAGGATTTAAGATACCTGAATCATATAATTCAAACTCTAGAGAATTATGTTCAATCAAATTACAAAGATCATTATATGGATTGAAA
CAATCAAGACGAATGTGGTACAATTGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATATGTCCATGTGTTTTTATTAAGAAATTACAGTCAGGATT
TGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCTTGAAGAGATTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAAATCTAGAAG
ATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAGCATTTTCAGTAAATTTGTTA
GCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAGCATGTATTTCGTTATCTTCGAGGGACAATTGATATGGGTTTGTTTTATTCAAATAAATCAAA
CTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATCTAATCCACACAAAGGAAGATCTCAAACAGGTTATTTGTTTACATGTGGAGGAACTGCTATATCTTGGCGAT
CTGTAAAGCAAACCATGACGGCCACTTCATCGAATCATGCAGAAATTCTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTCAATGACTCATCATATTCGA
GAAACATGTGGTTTGTCTTTCAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAACACAAATCAAAGGAGGGTATATAAAAGGAGATAGAACAAA
GCATATCTCACCAAAACTCTTCTATAAACATGACCTTGAAGAAAATGGTGACATCAGTGTTCAACAAATTTCTTCAAAAGACAACTTGGCGGACTTATTAACAAAAGCAT
TACCCACATCAACATTTTAA
Protein sequenceShow/hide protein sequence
MDTTSGKNVEETQVYIDNNEISINYTMIGKRWNRINVVVDNIFAYNVAQNIIHENEDYEPKFVDECRNRKDWPKWKEVIQAELNSLTKREVFGPVVYTPKGVKPVGFKWV
FVRKRNENNEVTRYKARLVVQGFSQRPGIDYEETYSSLVDAITLRYLISLVVCENLDMHLMDVVTAYLYGSLENEIYMKMPEGFKIPESYNSNSRELCSIKLQRSLYGLK
QSRRMWYNCLSEYLLKEGYQNNPICPCVFIKKLQSGFAIIAVYVDDLNIIGTLEEISKAIEYLKKEFEMKNLEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLL
ARYSSSPTKRHWNGVKHVFRYLRGTIDMGLFYSNKSNFDLVGYADAGYLSNPHKGRSQTGYLFTCGGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHHIR
ETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYKHDLEENGDISVQQISSKDNLADLLTKALPTSTF