; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0096991 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0096991
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTranscription initiation factor IIF subunit alpha
Genome locationCMiso1.1chr04:11666976..11673347
RNA-Seq ExpressionCmc04g0096991
SyntenyCmc04g0096991
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process)
GO:0005674 - transcription factor TFIIF complex (cellular component)
GO:0001096 - TFIIF-class transcription factor complex binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domainsIPR008851 - Transcription initiation factor IIF, alpha subunit
IPR011039 - Transcription Factor IIF, Rap30/Rap74, interaction
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152016.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus]7.0e-29298.88Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_016900419.1 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo]3.4e-29499.63Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022931161.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata]3.2e-27694.25Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+D+DDDD +E++GGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_031738317.1 transcription initiation factor IIF subunit alpha isoform X2 [Cucumis sativus]1.2e-27898.65Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRI
        RLRTPEDKNAFAEILR I
Subjt:  RLRTPEDKNAFAEILRRI

XP_038888042.1 transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]3.4e-28697.4Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDL+LKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKE VGTSGRGRRK TGDENEGNVSDRGEEDEEEEA RKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDE V TSKSTASKGAPA VKTEP+SHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

TrEMBL top hitse value%identityAlignment
A0A0A0LCA6 Transcription initiation factor IIF subunit alpha3.4e-29298.88Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha1.6e-29499.63Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1E3E1 Transcription initiation factor IIF subunit alpha5.1e-27292.58Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SDRGEEDEEEEAARKNRLGL+KK  GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRK-NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+ K TDEGV TSKSTASKGAPASVKTE +  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSAKGTPSTAKTAKGKRK-NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha1.5e-27694.25Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+D+DDDD +E++GGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1K1N5 Transcription initiation factor IIF subunit alpha9.3e-27493.17Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE
        GPAAFGEVEKFDDK+++G +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIE  GDDWEHEEIFTDDDE
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE

Query:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSP
        TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDG   EDD+DDDD +E++GGTPV PSKQKD VKEEAAANSP
Subjt:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSP

Query:  SKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
        SKP PSGSAKGT STAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEG+ TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVA
Subjt:  SKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA

Query:  KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

SwissProt top hitse value%identityAlignment
Q05913 General transcription factor IIF subunit 13.5e-0426Show/hide
Query:  RPWLLE--DETGQFQFQGHLEG--SQSATYYLLV-LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEK
        +PW+L+   +TG+ +F+G  EG   ++A +Y+          A P   WYNF  + +YK L+ EEAE++   RKK  + +   + K         G+ E+
Subjt:  RPWLLE--DETGQFQFQGHLEG--SQSATYYLLV-LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEK

Query:  FDDKETVGTSGRGRRKTTGDENEGNVSDRGE-EDEEEEAARKNRLGLSKKGGGDDDD----EEGPRGGD-----HDLDDDDIEKGDDWEHEEIFTDDDET
          D E      +  +  T    E  ++D  E  D E+E+  ++     KK   D DD     +G +G D      D+DD+  E+ DD + E    D D +
Subjt:  FDDKETVGTSGRGRRKTTGDENEGNVSDRGE-EDEEEEAARKNRLGLSKKGGGDDDD----EEGPRGGD-----HDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TA---PDREERED-----LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLR---------------------RTGGLNDSDGEDDEDDDDVDE
        ++   PD E + D     +A E      +  DEE++DE+   E     +  E KK  +                     ++ G  DS  +   D  D ++
Subjt:  TA---PDREERED-----LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLR---------------------RTGGLNDSDGEDDEDDDDVDE

Query:  DTGGTP-----VLPSKQKDTVKE-EAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKT
        D    P     V+  K K+  KE E+AA+S    + S + K   +T   +    K     K +S P     ++T   PT       K+  S   P S   
Subjt:  DTGGTP-----VLPSKQKDTVKE-EAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKT

Query:  EPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAE----ILRRISRIQKTNGGPSYVVLR
              G +TEE +R  L+ R P+T  +L+ KFK + +TP   +   E    IL++I+ ++ T  G  Y+ ++
Subjt:  EPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAE----ILRRISRIQKTNGGPSYVVLR

Q54WV4 General transcription factor IIF subunit 12.5e-1327.17Show/hide
Query:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF
        K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ LT EEAE+ MK + +  D +   + K      +  G  E  
Subjt:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF

Query:  DDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL
          K          R    D N    ++  ++ ++  A R+ R     +G G+D D         D DDD    GD        T +DE    + EE ED+
Subjt:  DDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL

Query:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDED-------TGGTPVLPSKQKDTVKEEAAANSPSKPTPSGS
                E+K+  + + ++N+ E  L+    + K     TGG +D D  DDEDD+D D+D         G          +VK+E      SK +    
Subjt:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDED-------TGGTPVLPSKQKDTVKEEAAANSPSKPTPSGS

Query:  AKGTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSS----HSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         K   S+ K+ + K +KN  D    +   KK+K E          P+S       +P+  + +       +  P TEE I+ VL++   V + DL+  FK
Subjt:  AKGTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSS----HSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKTNG
          L+ P++K  F  ++  ++R+ + NG
Subjt:  ARLRTPEDKNAFAEILRRISRIQKTNG

Q9SU25 Transcription initiation factor IIF subunit alpha1.9e-18367.27Show/hide
Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  VTRLIREYNVRA+A +DKNYFIGRF++GLPNF  K+ +ENKWSL K+  
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQ TDA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD
        GPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTD
Subjt:  GPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD

Query:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANS
        DDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSKSGKELKKLL +  GL++SD +DD+D DD +E   GT V  SKQK+  KEE   N+
Subjt:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTETE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQ
        P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL +
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTETE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQ

Query:  RTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK
        +  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Subjt:  RTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK

Arabidopsis top hitse value%identityAlignment
AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors2.9e-11865.19Show/hide
Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE

Query:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE
        SGKELKKLL +  GL++SD +DD+D DD +E   GT V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE

Query:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY
         +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors2.9e-11865.19Show/hide
Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE

Query:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE
        SGKELKKLL +  GL++SD +DD+D DD +E   GT V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE

Query:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY
         +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTCGATTTGCTCCTGAAGCCATCGTGCAGTGGATGTGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGTTTGACCTGTGGCAAAAC
TATGGCGGAGAACAAGGGCAAATGCTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGCAAGTAGCGACAAGAACTACTTCATTG
GTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGG
GAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAACAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCCACATACTACTTGCTTGTATTGCA
GGGAAAGGAATTTACTGCCATTCCTGCAGGTTCCTGGTACAACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAA
AGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGCGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACTAGT
GGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGGCAACGTCTCGGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAG
TAAAAAGGGCGGTGGTGATGACGATGATGAGGAAGGTCCTAGGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGGGATGATTGGGAGCACGAAGAGATTT
TTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAACAGGATGAAGAAGATGAGGATGAA
GAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGACGAGGATGACGA
CGATGTGGACGAGGATACTGGTGGCACTCCTGTCTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGAT
CTGCTAAGGGAACCCCTTCTACTGCGAAAACGGCAAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAA
TTGAAGCCTACAGATGAAGGTGTGCCTACTTCTAAAAGTACGGCCTCAAAAGGTGCACCGGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGA
AGAAATTAGGGCTGTCTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGATTGCGAACTCCAGAGGACAAAAATGCTTTTGCTGAAA
TACTACGGAGAATTTCAAGGATTCAAAAGACAAATGGAGGTCCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
GAAGTTAAAAATCAAATTGACGGTTAAATTCAAACTTTGGTTACCAAAAGTTACAAATACTAAAAAAAAAGGAAAAAAAGAGAAAAAATAAAAAGAAAAAGAAAGAGAAA
ATAAAGCAAGGCAGCCCTAGAGATCGGCCCTTCGCGCTCTCTCCCCTTGATCTCAGCTTTTCTCACCTCCACGTCGCCACCACCTTCTCCGCCCTATCGCTTAGCCGCCT
CTGTCGTGCTCCGCCCTCTTTACGCCTGCCGTCACCACCAGCAGAGGTAAAATCTCTCTCTCCCTTTTCGGTTTCTCTTTCTCTCTCTCTCTCACTCTCACCCCTGCTCC
ACCGCGGTCCATCGCTCGACCTCTATCGTTCTCGACAACTTCACCCACTGCCGGATCTGTGACGACGACACGTGATTAGACAGCAAACATCTACTTGTTCATCGCTTTTA
ACGGCTCTTGCGAACGAAAAGCCTTGCAAATAGTTTCGAATTAGATGGTCTCACTTGTTAGGGTTTAGCACAATATATGTGGAGGGTCGTTGTTGCTTAGTGACTGCCTT
AGCAACCAAACGTAGGAGAATCAGTTGTCTGGTATTGTAGATTTTTGTGGCTGAATTAAGGGGTGTGAGATGTCGTTCGATTTGCTCCTGAAGCCATCGTGCAGTGGATG
TGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGTTTGACCTGTGGCAAAACTATGGCGGAGAACAAGGGCAAATGCTATGATTGTGGGGCTA
CTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGCAAGTAGCGACAAGAACTACTTCATTGGTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAGA
AATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAAC
AGGCCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCCACATACTACTTGCTTGTATTGCAGGGAAAGGAATTTACTGCCATTCCTGCAGGTTCCTGGTACA
ACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCT
GCAAGTAATGGTCCTGCTGCATTTGGCGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACTAGTGGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGG
CAACGTCTCGGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAGTAAAAAGGGCGGTGGTGATGACGATGATGAGGAAGGTCCTA
GGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGGGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAA
AGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAACAGGATGAAGAAGATGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGA
GTTGAAGAAATTGCTTAGGCGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGACGAGGATGACGACGATGTGGACGAGGATACTGGTGGCACTCCTGTCTTACCTT
CGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCTTCTACTGCGAAAACGGCAAAGGGG
AAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAATTGAAGCCTACAGATGAAGGTGTGCCTACTTCTAAAAGTAC
GGCCTCAAAAGGTGCACCGGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGAAGAAATTAGGGCTGTCTTGCGGCAAAGGACACCTGTAACTA
CACAGGATCTTGTTGCAAAATTCAAAGCAAGATTGCGAACTCCAGAGGACAAAAATGCTTTTGCTGAAATACTACGGAGAATTTCAAGGATTCAAAAGACAAATGGAGGT
CCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAGAAGAATCAAGTTGATGTTTCATCTTTGTGATGTAGCTGATTCATGATTCCTTACTGGTTGGTGTGTTATGGTCG
TTAAGTACAATGTTTATGTGTCGAAACTCTATGCTGCAATAGCTTGAGAGGGCCTCCTCTTTCACATGTGATGTGATGAACTTGATATGGTACACTTTTATCTAGGCAAA
TGCAAAGGATAAATTTGTGGATTTGATAGAGGCATTCACTATTGGAATTTAAGTTCAACAAGATATAGGTATACGTTGAGAAAGAAACGAAAGTTTCTTCAGACATTTTG
TCATATTGGTTGTCATATCAATTTTGGCATTTTCTCAGAGTCGTTTCTAAAAGAATGCTTGGAGTAAAATAATGTTAAAATAAATAGGGTATTCTTGGTTTCGTTGAAGT
GTTTGGTGAATAAATTTAATATAAAATATGCTCCCTATCTTATTCACGTGCTTTGGTTGAAGTTTATTTATTATGGTGATTGGTGAAGATTAATAAAAGTATGATGCACA
AATTCTTATGGTTG
Protein sequenceShow/hide protein sequence
MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALR
EKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS
GRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEEDEDE
ENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE
LKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED