| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.1e-84 | 79.38 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK ++ K+PLELVHS+LCG MN+KA+GGYEYFISFIDD+SRYGHV L+HH S+SFEKFKEYK EV+NE+GKTIK LRSDR GEY+D +FQDYL
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IE GIQSQLSAPSTPQQN VSERRN+TLLDMVRSMMS+AQLP+SFWGYALET +ILNNVPSKSV +TPYELWKG K SL +FRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 4.0e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 4.0e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 4.0e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| TYK04171.1 gag/pol protein [Cucumis melo var. makuwa] | 4.0e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 1.9e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| A0A5A7UYE8 Gag/pol protein | 1.9e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| A0A5D3BUN8 Gag/pol protein | 1.9e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| A0A5D3BWT8 Gag/pol protein | 1.9e-80 | 75.77 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK + K PLEL+HS+LCG MN+KA+GG+EYFISFIDDYSRYG++ L+ H S++ EKFKEYK EV+N L K IKILRSDR GEY+DLRFQDY+
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IEHGIQSQLSAP TPQQN VSERRN+TLLDMVRSMMS+AQLP SFWGYA+ET +ILNNVPSKSVS+TP+ELW+G K SL HFRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| E2GK51 Gag/pol protein (Fragment) | 9.9e-85 | 79.38 | Show/hide |
Query: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
MTKR FTGK ++ K+PLELVHS+LCG MN+KA+GGYEYFISFIDD+SRYGHV L+HH S+SFEKFKEYK EV+NE+GKTIK LRSDR GEY+D +FQDYL
Subjt: MTKRYFTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYL
Query: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
IE GIQSQLSAPSTPQQN VSERRN+TLLDMVRSMMS+AQLP+SFWGYALET +ILNNVPSKSV +TPYELWKG K SL +FRIW P HVLV
Subjt: IEHGIQSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKTPYELWKGCKESLCHFRIWERPTHVLV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.8e-28 | 34.97 | Show/hide |
Query: VKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGIQSQLSAP
+K PL +VHS++CG + YF+ F+D ++ Y LI + SD F F+++ + + + L D EYL + + ++ GI L+ P
Subjt: VKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGIQSQLSAP
Query: STPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSV---SKTPYELWKGCKESLCHFRIWERPTHV
TPQ N VSER +T+ + R+M+S A+L +SFWG A+ T Y++N +PS+++ SKTPYE+W K L H R++ +V
Subjt: STPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSV---SKTPYELWKGCKESLCHFRIWERPTHV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.5e-34 | 39.77 | Show/hide |
Query: LELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGIQSQLSAPSTPQ
L+LV+S++CG M I++ GG +YF++FIDD SR V ++ F+ F+++ V+ E G+ +K LRSD GEY F++Y HGI+ + + P TPQ
Subjt: LELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGIQSQLSAPSTPQ
Query: QNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVS-KTPYELWKGCKESLCHFRIW
N V+ER N+T+++ VRSM+ A+LP+SFWG A++T Y++N PS ++ + P +W + S H +++
Subjt: QNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVS-KTPYELWKGCKESLCHFRIW
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 2.3e-09 | 23.87 | Show/hide |
Query: PLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDS--FEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGIQSQLSAPS
P + +H+++ G ++ + YFISF D+ +R+ V +H + F + N+ + +++ DR EY + + GI + + +
Subjt: PLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDS--FEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGIQSQLSAPS
Query: TPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKT
+ + V+ER N+TLL+ R+++ + LP W A+E I N++ S K+
Subjt: TPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVSKT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.0e-17 | 27.08 | Show/hide |
Query: FTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGI
F+ I PLE ++S++ S I + Y Y++ F+D ++RY + + S E F +K ++N I SD GE++ L +Y +HGI
Subjt: FTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGI
Query: QSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVS-KTPYELWKGCKESLCHFRI-------WERP
S P TP+ N +SER+++ +++ +++S A +P+++W YA Y++N +P+ + ++P++ G + R+ W RP
Subjt: QSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPSKSVS-KTPYELWKGCKESLCHFRI-------WERP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.1e-19 | 32.48 | Show/hide |
Query: FTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGI
F+ I PLE ++S++ S I + Y Y++ F+D ++RY + + S + F +K V+N I L SD GE++ LR DYL +HGI
Subjt: FTGKCIKVKIPLELVHSNLCGSMNIKAQGGYEYFISFIDDYSRYGHVDLIHHNSDSFEKFKEYKVEVDNELGKTIKILRSDRCGEYLDLRFQDYLIEHGI
Query: QSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPS
S P TP+ N +SER+++ +++M +++S A +P+++W YA Y++N +P+
Subjt: QSQLSAPSTPQQNSVSERRNQTLLDMVRSMMSFAQLPESFWGYALETVAYILNNVPS
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