| GenBank top hits | e value | %identity | Alignment |
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| KYP30916.1 Retrovirus-related Pol polyprotein from transposon 17.6, partial [Cajanus cajan] | 4.7e-51 | 49.09 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAP TFQRCMLSIF+DF+ CIEVFMDDFTVYG++F +CL SL+++L CI+ +L+LNFE CHFM GIVLGH++S KG+EVD K +VI L
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Y +C+++VRSFLG+A FYRRF+K+FSK ALPL+NLL+K RVD
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Query: IYYASWTLNSVQVNYSTTER
IYYAS TL++ Q NY+TTE+
Subjt: IYYASWTLNSVQVNYSTTER
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| KYP38652.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] | 8.0e-51 | 56.11 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAPATFQRCML+IF+D + KCIEVFMDDF+V+G++F +CL +L+ +LK C++ +L+LN+E CHFM + GIVLGH +S +G+EVDK K VI L
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK----------YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
+K ++SFLG+A FYRRFIKDFSK+A PL+NLL K G R + H I+YAS LN Q NY+TTE+
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK----------YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
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| PKA47724.1 RNA-directed DNA polymerase like [Apostasia shenzhenica] | 1.6e-51 | 49.78 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAPATFQRCML+IF+D + CIEVF+DDF+V+GN+F CL +L +ILK CI+++L LN+E CHFM GIVLGH+VS G+EVDK K ++I NL
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
T LK+VRSFLG+A FYRRFIKDFSK+A PL+NLL K G R+DNK H
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Query: IYYASWTLNSVQVNYSTTERVFV
I+YAS TLN Q+NY+ TE+ F+
Subjt: IYYASWTLNSVQVNYSTTERVFV
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| RVW86155.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Vitis vinifera] | 8.0e-51 | 58.86 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAPATFQRCMLSIF+D + + +EVFMDD T+YG F CL +LE +L CI++ L+LN+E CHFM GIVLGH++S+KG+EVDK K +I L
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK-----YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
T +K VR FLG+A FYRRFIKDFSKL+ PL LL + G R D K + IYYAS TLN Q NY+TTE+
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK-----YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
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| XP_031112037.1 uncharacterized protein LOC116016008 [Ipomoea triloba] | 9.4e-52 | 49.55 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAP TFQRCM+SIF++FI CIEVFMDDFTVYG++F CL++L ++LK CID +L+LN+E CHFM S GIVLGH++S KG+EVDK K ++I NL
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Y T +++VRSFLG+A FYRRFIKDFS++A+PL+ LL+K G +V + H
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Query: IYYASWTLNSVQVNYSTTER
IYYAS TLN+ Q +YSTTE+
Subjt: IYYASWTLNSVQVNYSTTER
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151QKV4 Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) | 2.3e-51 | 49.09 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAP TFQRCMLSIF+DF+ CIEVFMDDFTVYG++F +CL SL+++L CI+ +L+LNFE CHFM GIVLGH++S KG+EVD K +VI L
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Y +C+++VRSFLG+A FYRRF+K+FSK ALPL+NLL+K RVD
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Query: IYYASWTLNSVQVNYSTTER
IYYAS TL++ Q NY+TTE+
Subjt: IYYASWTLNSVQVNYSTTER
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| A0A151R7X5 Reverse transcriptase | 3.9e-51 | 56.11 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAPATFQRCML+IF+D + KCIEVFMDDF+V+G++F +CL +L+ +LK C++ +L+LN+E CHFM + GIVLGH +S +G+EVDK K VI L
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK----------YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
+K ++SFLG+A FYRRFIKDFSK+A PL+NLL K G R + H I+YAS LN Q NY+TTE+
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK----------YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
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| A0A2H9ZWR7 RNA-directed DNA polymerase like | 7.8e-52 | 49.78 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAPATFQRCML+IF+D + CIEVF+DDF+V+GN+F CL +L +ILK CI+++L LN+E CHFM GIVLGH+VS G+EVDK K ++I NL
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
T LK+VRSFLG+A FYRRFIKDFSK+A PL+NLL K G R+DNK H
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Query: IYYASWTLNSVQVNYSTTERVFV
I+YAS TLN Q+NY+ TE+ F+
Subjt: IYYASWTLNSVQVNYSTTERVFV
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| A0A438HNS3 Reverse transcriptase | 3.9e-51 | 58.86 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAPATFQRCMLSIF+D + + +EVFMDD T+YG F CL +LE +L CI++ L+LN+E CHFM GIVLGH++S+KG+EVDK K +I L
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK-----YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
T +K VR FLG+A FYRRFIKDFSKL+ PL LL + G R D K + IYYAS TLN Q NY+TTE+
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK-----YGHRVDNKLHAIYYASWTLNSVQVNYSTTER
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| A0A445LR48 Transposon Ty3-G Gag-Pol polyprotein | 5.0e-51 | 48.18 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGLCNAP TFQRCM+SIF+DF+ CIEVFMDDFTVYG++F CL+SLE++L CI+ +L+LNFE CHFM GIVLGH++S KG+EVD K +VI L
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Y +C+++VRSFLG+A FYRRFI+DFSK+ALPL+NLL+K ++D
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK--------------------------------------------------YGHRVDNKLHA
Query: IYYASWTLNSVQVNYSTTER
IYYAS L++ Q NY+TTE+
Subjt: IYYASWTLNSVQVNYSTTER
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 8.4e-19 | 35.25 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGL NAPATFQRCM I + K V++DD V+ + L SL + + +L L + C F+ LGH+++ G++ + K I
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK
T K++++FLG +YR+FI +F+ +A P+T LKK
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 2.0e-12 | 33.09 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
+ FGL AP +FQR M F+ ++MDD V G + L +L ++ C + +L L+ E C F LGH + KG+ D K +VI N
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK
R F+ +YRRFIK+F+ + +T L KK
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 4.2e-18 | 35.51 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
+ FGL NA + FQR + + + IGK V++DD ++ N + ++ +LK ID ++ ++ E F LG +VS+ G + D K I
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLK
C+ VRSFLG A +YR FIKDF+ +A P+T++LK
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.1e-21 | 35.25 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
M FGL NAPATFQRCM +I + K V++DD ++ + L+S++ + D +L L + C F+ LGH+V+ G++ + +K I +
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK
T K++R+FLG +YR+FI +++ +A P+T+ LKK
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLKK
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 9.9e-20 | 35.51 | Show/hide |
Query: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
+ FGL NAPA FQR + I + IGK V++DD V+ ++ + +L +L +L +N E HF+ + LG++V+ G++ D K I +
Subjt: MSFGLCNAPATFQRCMLSIFTDFIGKCIEVFMDDFTVYGNNFVSCLHSLEQILKICIDRSLILNFENCHFMASHGIVLGHLVSQKGLEVDKVKTNVIPNL
Query: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLK
T +K+++ FLG +YR+FI+D++K+A PLTNL +
Subjt: RYSTCLKDVRSFLGNAEFYRRFIKDFSKLALPLTNLLK
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