; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0097421 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0097421
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:12545123..12546043
RNA-Seq ExpressionCmc04g0097421
SyntenyCmc04g0097421
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025289.1 Beta-galactosidase [Cucumis melo var. makuwa]2.8e-12081.3Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM+YLFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYK  + FTLIHSDVWGPSKV  TSGK WFVTFI+DHTRLTWVYLIT+KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFL SK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSY+WGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]4.8e-12080.92Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM++LFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYKP + F LIHSDVWGPSKV  +SGK WFVTFI+DHTRLTWVYLI++KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFLASK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSYLWGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]4.8e-12080.92Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM++LFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYKP + F LIHSDVWGPSKV  +SGK WFVTFI+DHTRLTWVYLI++KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFLASK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSYLWGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

TYK07380.1 Beta-galactosidase [Cucumis melo var. makuwa]3.7e-12081.3Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM+YLFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYK  + FTLIHSDVWGPSKV  TSGK WFVTFI+DHTRLTWVYLIT+KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFL SK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSY+WGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]4.8e-12080.92Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM++LFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYKP + F LIHSDVWGPSKV  +SGK WFVTFI+DHTRLTWVYLI++KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFLASK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSYLWGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

TrEMBL top hitse value%identityAlignment
A0A5A7SJ13 Beta-galactosidase1.4e-12081.3Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM+YLFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYK  + FTLIHSDVWGPSKV  TSGK WFVTFI+DHTRLTWVYLIT+KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFL SK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSY+WGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

A0A5A7VLQ7 Beta-galactosidase2.3e-12080.92Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM++LFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYKP + F LIHSDVWGPSKV  +SGK WFVTFI+DHTRLTWVYLI++KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFLASK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSYLWGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

A0A5D3BJK7 Beta-galactosidase2.3e-12080.92Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM++LFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYKP + F LIHSDVWGPSKV  +SGK WFVTFI+DHTRLTWVYLI++KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFLASK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSYLWGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

A0A5D3C4T4 Beta-galactosidase2.3e-12080.92Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM++LFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYKP + F LIHSDVWGPSKV  +SGK WFVTFI+DHTRLTWVYLI++KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFLASK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSYLWGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

A0A5D3C7S0 Beta-galactosidase1.8e-12081.3Show/hide
Query:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI
        TYM+YLFPHLFSK+DVS LSCDVCIRAKQHRVSFPSQPYK  + FTLIHSDVWGPSKV  TSGK WFVTFI+DHTRLTWVYLIT+KSEV SI QN YHTI
Subjt:  TYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTI

Query:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL
        +TQFHTKIAI  SDNG EFQNH+L EFL SK IV+Q+SC YTP QNGVAER+NRHL +VA SLM LS SLPSY+WGD ILTAA+LINRMPSRILH+QTPL
Subjt:  ETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        DCLKE YP TRL+SEV LRV  CTAYVHNF PNQTKF PRAQACVFVGYPLH+ GYKCF+ P
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

SwissProt top hitse value%identityAlignment
O13527 Truncated transposon Ty1-A Gag-Pol polyprotein2.9e-1127.2Show/hide
Query:  PPIIVSLGLVYYLSILALLNIIVCCGI-FGWVTRTYMKYLFPHLFSKIDVSFLS-----CDVCI--RAKQHRVSFPSQ-----PYKPIKLFTLIHSDVWG
        PP I+S+ +  + +IL +L+ I C  +      R  +K      F++ DV + S     C  C+  ++ +HR    S+      Y+P   F  +H+D++G
Subjt:  PPIIVSLGLVYYLSILALLNIIVCCGI-FGWVTRTYMKYLFPHLFSKIDVSFLS-----CDVCI--RAKQHRVSFPSQ-----PYKPIKLFTLIHSDVWG

Query:  PSKVIATSGKWWFVTFINDHTRLTWVYLITNKSE--VSSISQNIYHTIETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERR
        P   +  S   +F++F ++ T+L WVY + ++ E  +  +   I   I+ QF   + +   D G E+ N +L +FL    I    + T     +GVAER 
Subjt:  PSKVIATSGKWWFVTFINDHTRLTWVYLITNKSE--VSSISQNIYHTIETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERR

Query:  NRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPS
        NR L     + +  S  LP++LW   I  +  + N + S
Subjt:  NRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPS

P04146 Copia protein4.0e-2933.33Show/hide
Query:  LFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFT-------LIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIET
        L + +++S   C+ C+  KQ R+     P+K +K  T       ++HSDV GP   +    K +FV F++  T     YLI  KS+V S+ Q+     E 
Subjt:  LFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFT-------LIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIET

Query:  QFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRIL--HIQTPL
         F+ K+   + DNG E+ ++ + +F   K I Y  +  +TP  NGV+ER  R + + A + M+    L    WG+ +LTA YLINR+PSR L    +TP 
Subjt:  QFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRIL--HIQTPL

Query:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGY
        +      P+ +      LRV   T YVH     Q KF+ ++   +FVGY
Subjt:  DCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGY

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.9e-3735.02Show/hide
Query:  CDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIETQFHTKIAIFWSDNGWEFQ
        CD C+  KQHRVSF +   + + +  L++SDV GP ++ +  G  +FVTFI+D +R  WVY++  K +V  + Q  +  +E +   K+    SDNG E+ 
Subjt:  CDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIETQFHTKIAIFWSDNGWEFQ

Query:  NHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPLDCLKEFYPFTRLISEVLLRV
        +    E+ +S  I ++ +   TP  NGVAER NR + +   S ML    LP   WG+ + TA YLINR PS  L  + P     E     + +S   L+V
Subjt:  NHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPLDCLKEFYPFTRLISEVLLRV

Query:  SRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYK
          C A+ H     +TK + ++  C+F+GY     GY+
Subjt:  SRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.5e-3133.61Show/hide
Query:  FLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIETQFHTKIAIFWSDNGW
        FLSC  C+  K ++V F        +    I+SDVW  S +++     ++V F++  TR TW+Y +  KS+V        + +E +F T+I  F+SDNG 
Subjt:  FLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIETQFHTKIAIFWSDNGW

Query:  EFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLS-ISLPSYLWGDTILTAAYLINRMPSRILHIQTPLDCLKEFYPFTRLISEV
        EF   +L E+ +   I + +S  +TP  NG++ER++RH+  V   L LLS  S+P   W      A YLINR+P+ +L +++P   L     F    +  
Subjt:  EFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLS-ISLPSYLWGDTILTAAYLINRMPSRILHIQTPLDCLKEFYPFTRLISEV

Query:  LLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFY
         LRV  C  Y      NQ K + +++ CVF+GY L +  Y C +
Subjt:  LLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFY

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.8e-3031.97Show/hide
Query:  LSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIETQFHTKIAIFWSDNGWE
        LSC  C   K H+V F +      K    I+SDVW  S +++     ++V F++  TR TW+Y +  KS+V          +E +F T+I   +SDNG E
Subjt:  LSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDHTRLTWVYLITNKSEVSSISQNIYHTIETQFHTKIAIFWSDNGWE

Query:  FQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPLDCLKEFYPFTRLISEVLL
        F    L ++L+   I + +S  +TP  NG++ER++RH+ ++  +L L   S+P   W      A YLINR+P+ +L +Q+P   L     F +  +   L
Subjt:  FQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAYLINRMPSRILHIQTPLDCLKEFYPFTRLISEVLL

Query:  RVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP
        +V  C  Y      N+ K   +++ C F+GY L +  Y C + P
Subjt:  RVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATACCTCCAATAATAGTATCTCTAGGACTAGTTTACTATCTTTCAATTTTAGCACTTTTAAACATTATTGTATGTTGTGGCATTTTTGGCTGGGTCACCCGAAC
TTATATGAAATATTTGTTTCCTCATCTATTTTCTAAAATTGATGTCTCCTTTCTATCTTGTGATGTTTGCATTCGAGCAAAACAACATCGGGTTTCTTTTCCCTCACAAC
CATATAAACCCATAAAACTGTTTACCCTTATCCATAGTGACGTTTGGGGTCCATCCAAGGTCATCGCCACATCTGGGAAATGGTGGTTTGTAACTTTCATCAATGATCAT
ACCCGTCTTACCTGGGTATACCTTATCACCAATAAATCTGAGGTTTCCTCTATTTCCCAAAACATCTATCACACTATTGAAACACAATTCCATACAAAAATTGCAATTTT
TTGGAGTGATAATGGTTGGGAATTCCAAAACCATAGCCTTGGTGAGTTCCTAGCCTCTAAGAGCATTGTTTACCAAAGCTCATGCACCTACACTCCTCTACAAAATGGGG
TGGCCGAGCGAAGAAACCGTCATCTTCCAAAAGTAGCCCATTCTCTTATGCTATTATCTATTTCCCTTCCTTCATACCTATGGGGAGATACTATTCTTACAGCAGCTTAT
TTAATCAATAGAATGCCTTCTCGTATCCTCCACATTCAAACTCCTTTAGATTGTCTTAAGGAGTTCTATCCTTTTACTCGTCTAATTTCTGAGGTTCTCCTTCGTGTGTC
TAGGTGTACCGCATATGTTCATAATTTCGACCCTAATCAGACCAAATTTAACCCTCGGGCTCAAGCTTGTGTGTTTGTTGGGTATCCCCTTCATCGGTGCGGATATAAAT
GTTTTTATACGCCATACAACTATGGATGTTACTTTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATACCTCCAATAATAGTATCTCTAGGACTAGTTTACTATCTTTCAATTTTAGCACTTTTAAACATTATTGTATGTTGTGGCATTTTTGGCTGGGTCACCCGAAC
TTATATGAAATATTTGTTTCCTCATCTATTTTCTAAAATTGATGTCTCCTTTCTATCTTGTGATGTTTGCATTCGAGCAAAACAACATCGGGTTTCTTTTCCCTCACAAC
CATATAAACCCATAAAACTGTTTACCCTTATCCATAGTGACGTTTGGGGTCCATCCAAGGTCATCGCCACATCTGGGAAATGGTGGTTTGTAACTTTCATCAATGATCAT
ACCCGTCTTACCTGGGTATACCTTATCACCAATAAATCTGAGGTTTCCTCTATTTCCCAAAACATCTATCACACTATTGAAACACAATTCCATACAAAAATTGCAATTTT
TTGGAGTGATAATGGTTGGGAATTCCAAAACCATAGCCTTGGTGAGTTCCTAGCCTCTAAGAGCATTGTTTACCAAAGCTCATGCACCTACACTCCTCTACAAAATGGGG
TGGCCGAGCGAAGAAACCGTCATCTTCCAAAAGTAGCCCATTCTCTTATGCTATTATCTATTTCCCTTCCTTCATACCTATGGGGAGATACTATTCTTACAGCAGCTTAT
TTAATCAATAGAATGCCTTCTCGTATCCTCCACATTCAAACTCCTTTAGATTGTCTTAAGGAGTTCTATCCTTTTACTCGTCTAATTTCTGAGGTTCTCCTTCGTGTGTC
TAGGTGTACCGCATATGTTCATAATTTCGACCCTAATCAGACCAAATTTAACCCTCGGGCTCAAGCTTGTGTGTTTGTTGGGTATCCCCTTCATCGGTGCGGATATAAAT
GTTTTTATACGCCATACAACTATGGATGTTACTTTCTGTGA
Protein sequenceShow/hide protein sequence
MMIPPIIVSLGLVYYLSILALLNIIVCCGIFGWVTRTYMKYLFPHLFSKIDVSFLSCDVCIRAKQHRVSFPSQPYKPIKLFTLIHSDVWGPSKVIATSGKWWFVTFINDH
TRLTWVYLITNKSEVSSISQNIYHTIETQFHTKIAIFWSDNGWEFQNHSLGEFLASKSIVYQSSCTYTPLQNGVAERRNRHLPKVAHSLMLLSISLPSYLWGDTILTAAY
LINRMPSRILHIQTPLDCLKEFYPFTRLISEVLLRVSRCTAYVHNFDPNQTKFNPRAQACVFVGYPLHRCGYKCFYTPYNYGCYFL