; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0097721 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0097721
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr04:12928840..12929628
RNA-Seq ExpressionCmc04g0097721
SyntenyCmc04g0097721
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN66208.1 hypothetical protein VITISV_035070 [Vitis vinifera]7.8e-9574.24Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDV+TTYLYGS++N+IYMKIPEGF++P++ N+  R + SIKLQRSLYGLKQS RMWYN LSEYLLKE Y NNPICPC+FIKKS+ GF IIA+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL++   YLKK FEMKDL KTKFCLGLQIEH  +G+ +HQS Y +K+LKRFYMDKAHPL+ PMVVRSL+VKK+ FRP E +EELLGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

RVW59049.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.0e-9474.24Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDV+T YLYGS++N+IYMKIPEGFK+P++ N+  R + SIKLQRSLYGLKQS RMWYN LSEYLLKE Y NNPICPC+FIKKS+ GF IIA+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL++   YLKK FEMKDL KTKFCLGLQIEH  +G+ +HQS Y +K+LKRFYMDKAHPL+ PMVVRSL+VKK+ FRP E +EELLGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

RVW60249.1 Copia protein [Vitis vinifera]1.0e-9473.8Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDV+TTYLYGS++N+IYMKIPEGFK+PE+ N+  R + SIKLQRSLYGLKQS RMWYNCLSEYLLKE Y NNPICPC+FIKKS+ GF IIA+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GT +EL++   YLKK FEMKDL KTKFCLGLQ+EH  +G+ +HQS Y +K+LKRFYMDKAHPL+ PMVVRSL+VKK+ F P E +EELLGPEVPYL+
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

RVW93168.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.6e-9574.67Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDV+T YLYGS++N+IYMKIPEGFK+P++ N+  R + SIKLQRSLYGLKQS RMWYN LSEYLLKE Y NNPICPC+FIKKS+ GF IIA+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL++   YLKK FEMKDL KTKFCLGLQIEH  +G+ +HQS Y +K+LKRFYMDKAHPL+ PMVVRSL+VKK+ FRP E +EELLGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSSS
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

RVW94544.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.0e-9474.67Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDV+TTYLYGS++N+IYMKIPEGFK+P++ N+  R + SIKLQRSLYGLKQS RMWYN LSEYLLKE Y NNPICPC+FIKKS+ GF IIA+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL++   YLKK FEMKDL KTKFCLGLQIEH  +G+ +HQS Y +K+LKRFYMDKAHPL+  MVVRSL+VKK+ FRP E +EELLGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSSS
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

TrEMBL top hitse value%identityAlignment
A0A2N9G6F8 Reverse transcriptase Ty1/copia-type domain-containing protein4.7e-9877.29Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDVVT YLYGSL+N+IYMKIPEG+K+PE+YNS SR + SIKLQRSLYGLKQS RMWYN LSEYLLKE ++NNPICPCVFIKKS+ GF I+A+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL+K  +YLK  FEMKDL KTKFCLGLQIEHL DGI IHQS YTEK+LK F+MDKAHPL+ PMVVRSL+VKK+ FRP+E  EE LGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

A0A2N9G9W6 Reverse transcriptase Ty1/copia-type domain-containing protein4.7e-9877.29Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDVVT YLYGSL+N+IYMKIPEG+K+PE+YNS SR + SIKLQRSLYGLKQS RMWYN LSEYLLKE ++NNPICPCVFIKKS+ GF I+A+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL+K  +YLK  FEMKDL KTKFCLGLQIEHL DGI IHQS YTEK+LK F+MDKAHPL+ PMVVRSL+VKK+ FRP+E  EE LGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

A0A2N9GX57 Reverse transcriptase Ty1/copia-type domain-containing protein4.7e-9877.29Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDVVT YLYGSL+N+IYMKIPEG+K+PE+YNS SR + SIKLQRSLYGLKQS RMWYN LSEYLLKE ++NNPICPCVFIKKS+ GF I+A+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL+K  +YLK  FEMKDL KTKFCLGLQIEHL DGI IHQS YTEK+LK F+MDKAHPL+ PMVVRSL+VKK+ FRP+E  EE LGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

A0A2N9HZE8 Reverse transcriptase Ty1/copia-type domain-containing protein4.7e-9877.29Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDVVT YLYGSL+N+IYMKIPEG+K+PE+YNS SR + SIKLQRSLYGLKQS RMWYN LSEYLLKE ++NNPICPCVFIKKS+ GF I+A+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL+K  +YLK  FEMKDL KTKFCLGLQIEHL DGI IHQS YTEK+LK F+MDKAHPL+ PMVVRSL+VKK+ FRP+E  EE LGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

A0A2N9I5S5 Reverse transcriptase Ty1/copia-type domain-containing protein4.7e-9877.29Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        M LMDVVT YLYGSL+N+IYMKIPEG+K+PE+YNS SR + SIKLQRSLYGLKQS RMWYN LSEYLLKE ++NNPICPCVFIKKS+ GF I+A+YVD L
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
        N++GTP+EL+K  +YLK  FEMKDL KTKFCLGLQIEHL DGI IHQS YTEK+LK F+MDKAHPL+ PMVVRSL+VKK+ FRP+E  EE LGPEVPYLS
Subjt:  NIIGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRYSSS
        AIGALMYLAN TRP+I+FSVNLL RYSS+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRYSSS

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.0e-2933.46Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKEC-YQNNPICPCVFI--KKSQLGFVIIALYV
        +H MDV T +L G+L+ EIYM++P+G       + NS  +C  KL +++YGLKQ+ R W+  + E  LKEC + N+ +  C++I  K +    + + LYV
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKEC-YQNNPICPCVFI--KKSQLGFVIIALYV

Query:  DGLNI-IGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPE-
        D + I  G    ++    YL + F M DL++ K  +G++IE   D I++ QS Y +KIL +F M+  + ++ P+             P + N ELL  + 
Subjt:  DGLNI-IGTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPE-

Query:  ---VPYLSAIGALMYLANNTRPNISFSVNLLVRYSSSKKKDVEMELSMYFVIFEGQL
            P  S IG LMY+   TRP+++ +VN+L RYSS    ++   L       +G +
Subjt:  ---VPYLSAIGALMYLANNTRPNISFSVNLLVRYSSSKKKDVEMELSMYFVIFEGQL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-3236.75Show/hide
Query:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKK-SQLGFVIIALYVDGLNI
        +DV T +L+G LE EIYM+ PEGF++          +C  KL +SLYGLKQ+ R WY     ++  + Y      PCV+ K+ S+  F+I+ LYVD + I
Subjt:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKK-SQLGFVIIALYVDGLNI

Query:  IGTPKEL-SKAIEYLKKGFEMKDLSKTKFCLGLQI--EHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYL
        +G  K L +K    L K F+MKDL   +  LG++I  E  +  +++ Q  Y E++L+RF M  A P++ P+       KK    P    E+    +VPY 
Subjt:  IGTPKEL-SKAIEYLKKGFEMKDLSKTKFCLGLQI--EHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYL

Query:  SAIGALMYLANNTRPNISFSVNLLVRYSSSKKKD
        SA+G+LMY    TRP+I+ +V ++ R+  +  K+
Subjt:  SAIGALMYLANNTRPNISFSVNLLVRYSSSKKKD

P25600 Putative transposon Ty5-1 protein YCL074W1.6e-1329.65Show/hide
Query:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSI-KLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGLNI
        MDV T +L  +++  IY+K P GF        N R    + +L   +YGLKQ+  +W   ++  L K  +  +     ++ + +  G + IA+YVD L +
Subjt:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSI-KLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGLNI

Query:  IG-TPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADG-IFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS
           +PK   +  + L K + MKDL K    LGL I   ++G I +    Y  K      ++       P     L   K +F   E     L    PY S
Subjt:  IG-TPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADG-IFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLS

Query:  AIGALMYLANNTRPNISFSVNLLVRY
         +G L++ AN  RP+IS+ V+LL R+
Subjt:  AIGALMYLANNTRPNISFSVNLLVRY

Q03855 Transposon Ty1-DR1 Gag-Pol polyprotein7.2e-1127.88Show/hide
Query:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKEC-YQNNPICPCVFIKKSQLGFVIIALYVDGLNI
        +D+ + YLY  ++ E+Y++ P    + +           I+L++SLYGLKQS   WY  +  YL+K+C  +      CVF K SQ   V I L+VD + +
Subjt:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKEC-YQNNPICPCVFIKKSQLGFVIIALYVDGLNI

Query:  IGTPKELS---KAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVK-KNIFRPRE-----DNEELLG
            K+L+   K I  LKK ++ K ++  +    +Q + L   I   +S Y +  +++   +K   LN+P     LN K K +  P +     D +EL  
Subjt:  IGTPKELS---KAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVK-KNIFRPRE-----DNEELLG

Query:  PEVPY-------LSAIGALMYLANNTRPNISFSVNLL---VRYSSSKKKDVEMELSMY-FVIFEGQLIW
         E  Y          IG   Y+    R ++ + +N L   + + S +  D+  EL  + +   + QLIW
Subjt:  PEVPY-------LSAIGALMYLANNTRPNISFSVNLL---VRYSSSKKKDVEMELSMY-FVIFEGQLIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.9e-1931.25Show/hide
Query:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGLNII
        +DV   +L G+L +++YM  P GF   +  N     +C  KL+++LYGLKQ+ R WY  L  YLL   + N+     +F+ +     V + +YVD + I 
Subjt:  MDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGLNII

Query:  GT-PKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLSAI
        G  P  L   ++ L + F +KD  +  + LG++ + +  G+ + Q  Y   +L R  M  A P+  PM   + + K +++       +L  P   Y   +
Subjt:  GT-PKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLSAI

Query:  GALMYLANNTRPNISFSVNLLVRY
        G+L YLA  TRP+IS++VN L ++
Subjt:  GALMYLANNTRPNISFSVNLLVRY

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.7e-1928.88Show/hide
Query:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL
        +H +D+   +L G L+ EIYMK+P G+   +  +     +C +K  +S+YGLKQ+ R W+   S  L+   +  +      F+K +   F+ + +YVD +
Subjt:  MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGL

Query:  NII-GTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYL
         I       + +    LK  F+++DL   K+ LGL+I   A GI I Q  Y   +L    +    P ++PM         ++        + +  +  Y 
Subjt:  NII-GTPKELSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYL

Query:  SAIGALMYLANNTRPNISFSVNLLVRYSSSKK
          IG LMYL   TR +ISF+VN L ++S + +
Subjt:  SAIGALMYLANNTRPNISFSVNLLVRYSSSKK

ATMG00810.1 DNA/RNA polymerases superfamily protein6.3e-1031.82Show/hide
Query:  IALYVDGLNIIGTPKE-LSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEEL
        + LYVD + + G+    L+  I  L   F MKDL    + LG+QI+    G+F+ Q+ Y E+IL    M    P++ P+ ++ LN   +  +  + ++  
Subjt:  IALYVDGLNIIGTPKE-LSKAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEEL

Query:  LGPEVPYLSAIGALMYLANNTRPNISFSVNLL
              + S +GAL YL   TRP+IS++VN++
Subjt:  LGPEVPYLSAIGALMYLANNTRPNISFSVNLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTTATGGATGTAGTTACAACATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACCTGAATCATATAATTCAAACTC
TAGAGAATTATGTTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGAACGAATGTGGTACAATTGCTTAAGTGAATATTTATTGAAAGAATGTTATCAAA
ATAATCCAATTTGTCCATGTGTTTTTATTAAAAAATCACAGCTAGGATTTGTGATTATAGCTCTATATGTTGATGGCTTAAATATAATTGGAACTCCTAAAGAGCTTTCA
AAAGCAATAGAATATCTCAAAAAGGGATTTGAAATGAAAGATCTTAGTAAGACAAAATTTTGTCTTGGCTTACAAATCGAGCATTTAGCCGATGGAATTTTTATTCATCA
ATCGATATATACAGAAAAGATTTTAAAAAGATTCTATATGGACAAAGCGCACCCATTGAACATTCCAATGGTAGTTCGATCACTAAATGTAAAAAAGAATATCTTTCGAC
CTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAAATATATCATTTTCAGTA
AATCTATTAGTAAGATATAGTTCTTCTAAAAAAAAAGACGTTGAAATGGAGTTAAGCATGTACTTTGTTATCTTCGAAGGACAATTGATATGGGTTTGTTTTATTCAAAT
AAACCAAACTTTGATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATCTTATGGATGTAGTTACAACATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACCTGAATCATATAATTCAAACTC
TAGAGAATTATGTTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGAACGAATGTGGTACAATTGCTTAAGTGAATATTTATTGAAAGAATGTTATCAAA
ATAATCCAATTTGTCCATGTGTTTTTATTAAAAAATCACAGCTAGGATTTGTGATTATAGCTCTATATGTTGATGGCTTAAATATAATTGGAACTCCTAAAGAGCTTTCA
AAAGCAATAGAATATCTCAAAAAGGGATTTGAAATGAAAGATCTTAGTAAGACAAAATTTTGTCTTGGCTTACAAATCGAGCATTTAGCCGATGGAATTTTTATTCATCA
ATCGATATATACAGAAAAGATTTTAAAAAGATTCTATATGGACAAAGCGCACCCATTGAACATTCCAATGGTAGTTCGATCACTAAATGTAAAAAAGAATATCTTTCGAC
CTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAAATATATCATTTTCAGTA
AATCTATTAGTAAGATATAGTTCTTCTAAAAAAAAAGACGTTGAAATGGAGTTAAGCATGTACTTTGTTATCTTCGAAGGACAATTGATATGGGTTTGTTTTATTCAAAT
AAACCAAACTTTGATCTAG
Protein sequenceShow/hide protein sequence
MHLMDVVTTYLYGSLENEIYMKIPEGFKIPESYNSNSRELCSIKLQRSLYGLKQSERMWYNCLSEYLLKECYQNNPICPCVFIKKSQLGFVIIALYVDGLNIIGTPKELS
KAIEYLKKGFEMKDLSKTKFCLGLQIEHLADGIFIHQSIYTEKILKRFYMDKAHPLNIPMVVRSLNVKKNIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPNISFSV
NLLVRYSSSKKKDVEMELSMYFVIFEGQLIWVCFIQINQTLI