| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.8e-62 | 81.38 | Show/hide |
Query: LSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDSD
L +R+GI+LSKEQCPKTPQ+VED+R IPY+SAVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RT++YMLVYG KDLILT YTDSD
Subjt: LSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDSD
Query: FQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
FQ+DKDARKS SGS+FTLN G+VVWR KQTCIADSTMEAEYVAA
Subjt: FQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| KAA0026227.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-62 | 82.88 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+LS RYGI+LSKEQCPKTPQ+VED+ IPYASAVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RTKDYMLVYG+KDLILTRYT+
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKDARKS SGS+FTLNEG+VVWR KQ+ IADSTMEAEYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| KAA0050132.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-62 | 81.51 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+LSYRYGI+LSKEQCPKTPQ+VED+ I YA AVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RTKDYMLVYG+KDLIL YTDS
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKDARKS SGS+FTLN G+VVWR KQ+CIADSTME EYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| KAA0063026.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-62 | 81.51 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+LSYRY I+LSKEQCPKTPQKVEDI IPYAS V SLMYAMLCTRP C+S+G++SRYQSNPG DHWTT+KNILKYL RTKDYMLVYG+KDLILT YTDS
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKD RKS SGS+FTLN G VVWR KQ+CIA+STMEAEYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| TYK06386.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-62 | 81.51 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+L YRYGI+LSKEQCPKTPQ+VED+ IPYA AVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RTKDYMLVYG+KDLIL YTDS
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKDARKS SGS+FTLN G+VVWR KQ+CIADSTME EYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNE2 Gag/pol protein | 6.2e-63 | 82.88 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+LS RYGI+LSKEQCPKTPQ+VED+ IPYASAVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RTKDYMLVYG+KDLILTRYT+
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKDARKS SGS+FTLNEG+VVWR KQ+ IADSTMEAEYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| A0A5A7U2R8 Gag/pol protein | 2.3e-62 | 81.51 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+LSYRYGI+LSKEQCPKTPQ+VED+ I YA AVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RTKDYMLVYG+KDLIL YTDS
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKDARKS SGS+FTLN G+VVWR KQ+CIADSTME EYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| A0A5A7V9B0 Gag/pol protein | 8.0e-63 | 81.51 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+LSYRY I+LSKEQCPKTPQKVEDI IPYAS V SLMYAMLCTRP C+S+G++SRYQSNPG DHWTT+KNILKYL RTKDYMLVYG+KDLILT YTDS
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKD RKS SGS+FTLN G VVWR KQ+CIA+STMEAEYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| A0A5D3C7T2 Gag/pol protein | 1.8e-62 | 81.51 | Show/hide |
Query: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
+L YRYGI+LSKEQCPKTPQ+VED+ IPYA AVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RTKDYMLVYG+KDLIL YTDS
Subjt: MLSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDS
Query: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
DFQTDKDARKS SGS+FTLN G+VVWR KQ+CIADSTME EYVAA
Subjt: DFQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| E2GK51 Gag/pol protein (Fragment) | 1.4e-62 | 81.38 | Show/hide |
Query: LSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDSD
L +R+GI+LSKEQCPKTPQ+VED+R IPY+SAVGSLMYAMLCTRP C+SVG+VSRYQSNPG DHWT +KNILKYL RT++YMLVYG KDLILT YTDSD
Subjt: LSYRYGIYLSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDSD
Query: FQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
FQ+DKDARKS SGS+FTLN G+VVWR KQTCIADSTMEAEYVAA
Subjt: FQTDKDARKSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-14 | 37.7 | Show/hide |
Query: PYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLI----LTRYTDSDFQTDKDARKSISGSIFTLNEGSV
P S +G LMY MLCTRP +V ++SRY S + W LK +L+YL T D L++ K+L + Y DSD+ + RKS +G +F + + ++
Subjt: PYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLI----LTRYTDSDFQTDKDARKSISGSIFTLNEGSV
Query: V-WRCEKQTCIADSTMEAEYVA
+ W ++Q +A S+ EAEY+A
Subjt: V-WRCEKQTCIADSTMEAEYVA
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| P0CV72 Secreted RxLR effector protein 161 | 3.3e-21 | 42.74 | Show/hide |
Query: IRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVY---GTKDLILTRYTDSDFQTDKDARKSISGSIFTLNE
++ +PY SAVG++MY M+ TRP +VG++S++ S+P HW LK +L+YL T+ Y L + GT L+ Y+D+D+ D ++R+S SG +F LN
Subjt: IRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVY---GTKDLILTRYTDSDFQTDKDARKSISGSIFTLNE
Query: GSVVWRCEKQTCIADSTMEAEYVA
G V WR +KQ +A S+ E EY+A
Subjt: GSVVWRCEKQTCIADSTMEAEYVA
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-33 | 50.36 | Show/hide |
Query: LSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDSDFQTDKDAR
LSK+ CP T ++ ++ K+PY+SAVGSLMYAM+CTRP +VG+VSR+ NPG +HW +K IL+YL T L +G D IL YTD+D D D R
Subjt: LSKEQCPKTPQKVEDIRKIPYASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDYMLVYGTKDLILTRYTDSDFQTDKDAR
Query: KSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
KS +G +FT + G++ W+ + Q C+A ST EAEY+AA
Subjt: KSISGSIFTLNEGSVVWRCEKQTCIADSTMEAEYVAA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-09 | 34.78 | Show/hide |
Query: YASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDY-MLVYGTKDLILTRYTDSDFQTDKDARKSISGSIFTLNEGSVVWRC
Y VGSL Y + TRP ++V +S++ P +H LK IL+YL T ++ + + L L Y+D+D+ DKD S +G I L + W
Subjt: YASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDY-MLVYGTKDLILTRYTDSDFQTDKDARKSISGSIFTLNEGSVVWRC
Query: EKQTCIADSTMEAEY
+KQ + S+ EAEY
Subjt: EKQTCIADSTMEAEY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.8e-12 | 36.52 | Show/hide |
Query: YASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDY-MLVYGTKDLILTRYTDSDFQTDKDARKSISGSIFTLNEGSVVWRC
Y VGSL Y + TRP ++V +S+Y P DHW LK +L+YL T D+ + + L L Y+D+D+ D D S +G I L + W
Subjt: YASAVGSLMYAMLCTRPAFCFSVGMVSRYQSNPGCDHWTTLKNILKYLTRTKDY-MLVYGTKDLILTRYTDSDFQTDKDARKSISGSIFTLNEGSVVWRC
Query: EKQTCIADSTMEAEY
+KQ + S+ EAEY
Subjt: EKQTCIADSTMEAEY
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