| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 6.5e-79 | 86.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVDRDQWIKAM LEMESMYFNS+W LVD P+DVKPIGC WIYKRK+DQAGKVQTFKA+LV KGYTQ++GVDYEETFS V MLKSIRILLSIATFY+YE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SIYM QPEGFI + +EQKVCKLQKSI GLKQASRSWNIRFDTAIKSYGFE
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-76 | 83.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVD+DQW+KAM LEMESMYFNS+W LVD P VKPIGC WIYKRK+D AGKVQTFKA+LV KGYTQR+GVDYEETFS V MLKSIRILLSIATFYDYE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SI+M+QPEGFI +G+EQKVCKL +SI GLKQASRSWNIRFDTAIKSYGF+
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-76 | 81.93 | Show/hide |
Query: NDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEI
NDVD DQWIKAM L+MESMY NS+W LVDQPN+++PIGC WIYKRK+DQ KVQTF+A+LV KGYTQ++G+DYEETFS + M+KSIRILLSIATFYDYEI
Subjt: NDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEI
Query: WKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
W+MDVKTAFLNGNLE+SIYM QPEGFI+KG+EQKVCKLQKSI GLKQASRSWNIRFDT IKSYGFE
Subjt: WKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-76 | 83.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVD+DQW+KAM LEMESMYFNS+W LVD P VKPIGC WIYKRK+D AGKVQTFKA+LV KGYTQR+GVDYEETFS V MLKSIRILLSIATFYDYE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SI+M+QPEGFI +G+EQKVCKL +SI GLKQASRSWNIRFDTAIKSYGF+
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-76 | 83.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVD+DQW+KAM LEMESMYFNS+W LVD P VKPIGC WIYKRK+D AGKVQTFKA+LV KGYTQR+GVDYEETFS V MLKSIRILLSIATFYDYE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SI+M+QPEGFI +G+EQKVCKL +SI GLKQASRSWNIRFDTAIKSYGF+
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 1.9e-76 | 81.93 | Show/hide |
Query: NDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEI
NDVD DQWIKAM L+MESMY NS+W LVDQPN+++PIGC WIYKRK+DQ KVQTF+A+LV KGYTQ++G+DYEETFS + M+KSIRILLSIATFYDYEI
Subjt: NDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEI
Query: WKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
W+MDVKTAFLNGNLE+SIYM QPEGFI+KG+EQKVCKLQKSI GLKQASRSWNIRFDT IKSYGFE
Subjt: WKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| A0A5A7TZD0 Gag/pol protein | 5.0e-77 | 83.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVD+DQW+KAM LEMESMYFNS+W LVD P VKPIGC WIYKRK+D AGKVQTFKA+LV KGYTQR+GVDYEETFS V MLKSIRILLSIATFYDYE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SI+M+QPEGFI +G+EQKVCKL +SI GLKQASRSWNIRFDTAIKSYGF+
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| A0A5A7UYE8 Gag/pol protein | 5.0e-77 | 83.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVD+DQW+KAM LEMESMYFNS+W LVD P VKPIGC WIYKRK+D AGKVQTFKA+LV KGYTQR+GVDYEETFS V MLKSIRILLSIATFYDYE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SI+M+QPEGFI +G+EQKVCKL +SI GLKQASRSWNIRFDTAIKSYGF+
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| A0A5D3CYF4 Gag/pol protein | 5.0e-77 | 83.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVD+DQW+KAM LEMESMYFNS+W LVD P VKPIGC WIYKRK+D AGKVQTFKA+LV KGYTQR+GVDYEETFS V MLKSIRILLSIATFYDYE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SI+M+QPEGFI +G+EQKVCKL +SI GLKQASRSWNIRFDTAIKSYGF+
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| E2GK51 Gag/pol protein (Fragment) | 3.1e-79 | 86.83 | Show/hide |
Query: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
MNDVDRDQWIKAM LEMESMYFNS+W LVD P+DVKPIGC WIYKRK+DQAGKVQTFKA+LV KGYTQ++GVDYEETFS V MLKSIRILLSIATFY+YE
Subjt: MNDVDRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYE
Query: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
IW+MDVKTAFLNGNLE+SIYM QPEGFI + +EQKVCKLQKSI GLKQASRSWNIRFDTAIKSYGFE
Subjt: IWKMDVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGFE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.9e-30 | 38.27 | Show/hide |
Query: DRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKM
D+ W +A+ E+ + N+ W + +P + + W++ K ++ G +KA+LV +G+TQ+ +DYEETF+ V + S R +LS+ Y+ ++ +M
Subjt: DRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKM
Query: DVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGF
DVKTAFLNG L++ IYM P+G VCKL K+I GLKQA+R W F+ A+K F
Subjt: DVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-39 | 49.06 | Show/hide |
Query: DRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKM
+++Q +KAM EMES+ N + LV+ P +P+ C W++K K+D K+ +KA+LVVKG+ Q+ G+D++E FS VV + SIR +LS+A D E+ ++
Subjt: DRDQWIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKM
Query: DVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKS
DVKTAFL+G+LE+ IYM QPEGF G++ VCKL KS+ GLKQA R W ++FD+ +KS
Subjt: DVKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKS
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-12 | 38.37 | Show/hide |
Query: WIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIA
W +AM E++++ N WILV P + +GC W++K K G + KA+LV KG+ Q +G+ + ET+S VV +IR +L++A
Subjt: WIKAMGLEMESMYFNSIWILVDQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.6e-34 | 44.1 | Show/hide |
Query: DQWIKAMGLEMESMYFNSIWILV-DQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKMD
++W AMG E+ + N W LV P+ V +GC WI+ +K + G + +KA+LV KGY QR G+DY ETFS V+ SIRI+L +A + I ++D
Subjt: DQWIKAMGLEMESMYFNSIWILV-DQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKMD
Query: VKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGF
V AFL G L +YM+QP GFI K R VCKL+K++ GLKQA R+W + + + GF
Subjt: VKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-34 | 44.72 | Show/hide |
Query: DQWIKAMGLEMESMYFNSIWILV-DQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKMD
D+W +AMG E+ + N W LV P V +GC WI+ +K + G + +KA+LV KGY QR G+DY ETFS V+ SIRI+L +A + I ++D
Subjt: DQWIKAMGLEMESMYFNSIWILV-DQPNDVKPIGCTWIYKRKQDQAGKVQTFKAQLVVKGYTQRDGVDYEETFSHVVMLKSIRILLSIATFYDYEIWKMD
Query: VKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGF
V AFL G L +YM+QP GF+ K R VC+L+K+I GLKQA R+W + T + + GF
Subjt: VKTAFLNGNLEKSIYMTQPEGFIKKGREQKVCKLQKSICGLKQASRSWNIRFDTAIKSYGF
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