; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0098151 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0098151
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr04:13495877..13496770
RNA-Seq ExpressionCmc04g0098151
SyntenyCmc04g0098151
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033024.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-13984.51Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MKDLGN  YVL  QIVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LL YRYGIHLSKEQCPKTPQEVEDMSNI YAS   SLMYAMLCTR DICY V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVSRYQSNP RD+WT VKNI+KYLRRTKDYML+YG +DLILTGYT+SDFQTDKDA+K TS SVFTLN GAV WRSIKQ CI +S +EA+YV ACEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL
        V LKKFLTDLEVVPNM LPITLYCDNSGAVANSREPRSHK+GKHIE+K+HLIREI+HRGD+T+TKISFEQNMADPFTKALTTKVFESHLHGLGL  L
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL

KAA0052272.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-13884.59Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MKDL N  YVL I+IVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEV+DMSNI YAS VGSLMYAMLCTRPDICY VG
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVSRYQSNP  D+WTAVKNI+KYLRRTKDYML+YG KDLILT YTDSDFQ+DKD +K TS SVFTLNG AVVW+ IKQ CIA+STMEA+YV +CEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGL
        V LKKFLTDLE+VPN+HLPITLYCDNSGAVANS+EPRSHKR KHIERKYHLIREIIHRGD+T+TKIS EQN+ DPFTKALT KVFESHLH L
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGL

KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa]8.7e-14386.2Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MK LGN PYVL IQIVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA  +GSLMYAMLC RPDICY V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVS YQSNP RD+WT VKNIIKYLRRTKDYM +YG KDLILT YTDSDFQTDKDA+K TSGSVF LNGGAVVWRSIKQ CIA+STME +YV ACEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL
        V LKKFLTDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+I+HRGD+TVTKIS E+NMADPF KALT K+FESHLHGLGLRGL
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL

KAA0067716.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-13984.12Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MKDLGN  YVL IQIVRN KNKTLAM QTSYIDK+LSR+KMQNSKK LLPYRYGIHLSKEQCPKT Q+V+DMSNI YAS +GSLMYAMLCTRP+ICY VG
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVSRYQSNP RD+WTAVKNI+KYLRRTK+YML+YG KDLILTGY D DFQTDKDA+K TSGSVFTLNGGAVVWRSIKQ CI +STME +YV A EA KEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRG
        V LKKFLTDLEVVPNMH+PITLYCDNSG VANSREPRSHKRGKHIERKYHLIREI+HRGD+TVTK+  EQNMA PFTKALT KVF SHL GL LRG
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRG

TYK23767.1 gag/pol protein [Cucumis melo var. makuwa]8.7e-14386.2Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MK LGN PYVL IQIVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA  +GSLMYAMLC RPDICY V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVS YQSNP RD+WT VKNIIKYLRRTKDYM +YG KDLILT YTDSDFQTDKDA+K TSGSVF LNGGAVVWRSIKQ CIA+STME +YV ACEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL
        V LKKFLTDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+I+HRGD+TVTKIS E+NMADPF KALT K+FESHLHGLGLRGL
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL

TrEMBL top hitse value%identityAlignment
A0A5A7SP86 Gag/pol protein2.2e-13984.51Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MKDLGN  YVL  QIVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LL YRYGIHLSKEQCPKTPQEVEDMSNI YAS   SLMYAMLCTR DICY V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVSRYQSNP RD+WT VKNI+KYLRRTKDYML+YG +DLILTGYT+SDFQTDKDA+K TS SVFTLN GAV WRSIKQ CI +S +EA+YV ACEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL
        V LKKFLTDLEVVPNM LPITLYCDNSGAVANSREPRSHK+GKHIE+K+HLIREI+HRGD+T+TKISFEQNMADPFTKALTTKVFESHLHGLGL  L
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL

A0A5A7U945 Gag/pol protein1.1e-13884.59Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MKDL N  YVL I+IVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEV+DMSNI YAS VGSLMYAMLCTRPDICY VG
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVSRYQSNP  D+WTAVKNI+KYLRRTKDYML+YG KDLILT YTDSDFQ+DKD +K TS SVFTLNG AVVW+ IKQ CIA+STMEA+YV +CEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGL
        V LKKFLTDLE+VPN+HLPITLYCDNSGAVANS+EPRSHKR KHIERKYHLIREIIHRGD+T+TKIS EQN+ DPFTKALT KVFESHLH L
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGL

A0A5A7UUR4 Gag/pol protein4.2e-14386.2Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MK LGN PYVL IQIVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA  +GSLMYAMLC RPDICY V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVS YQSNP RD+WT VKNIIKYLRRTKDYM +YG KDLILT YTDSDFQTDKDA+K TSGSVF LNGGAVVWRSIKQ CIA+STME +YV ACEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL
        V LKKFLTDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+I+HRGD+TVTKIS E+NMADPF KALT K+FESHLHGLGLRGL
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL

A0A5A7VMF5 Gag/pol protein3.7e-13984.12Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MKDLGN  YVL IQIVRN KNKTLAM QTSYIDK+LSR+KMQNSKK LLPYRYGIHLSKEQCPKT Q+V+DMSNI YAS +GSLMYAMLCTRP+ICY VG
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVSRYQSNP RD+WTAVKNI+KYLRRTK+YML+YG KDLILTGY D DFQTDKDA+K TSGSVFTLNGGAVVWRSIKQ CI +STME +YV A EA KEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRG
        V LKKFLTDLEVVPNMH+PITLYCDNSG VANSREPRSHKRGKHIERKYHLIREI+HRGD+TVTK+  EQNMA PFTKALT KVF SHL GL LRG
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRG

A0A5D3DJL5 Gag/pol protein4.2e-14386.2Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MK LGN PYVL IQIVRN KNKTLAM QTSYIDK+LSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA  +GSLMYAMLC RPDICY V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        IVS YQSNP RD+WT VKNIIKYLRRTKDYM +YG KDLILT YTDSDFQTDKDA+K TSGSVF LNGGAVVWRSIKQ CIA+STME +YV ACEAAKEA
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL
        V LKKFLTDLEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+I+HRGD+TVTKIS E+NMADPF KALT K+FESHLHGLGLRGL
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.9e-3733Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLP----YRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDIC
        M DL  + + + I+I    +   + + Q++Y+ KILS++ M+N      P      Y +  S E C           N    S +G LMY MLCTRPD+ 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLP----YRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDIC

Query:  YLVGIVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMY----GYKDLILTGYTDSDFQTDKDAKKFTSGSVFTL-NGGAVVWRSIKQPCIANSTMEAQYV
          V I+SRY S    + W  +K +++YL+ T D  L++     +++ I+ GY DSD+   +  +K T+G +F + +   + W + +Q  +A S+ EA+Y+
Subjt:  YLVGIVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMY----GYKDLILTGYTDSDFQTDKDAKKFTSGSVFTL-NGGAVVWRSIKQPCIANSTMEAQYV

Query:  DACEAAKEAVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHG
           EA +EA+ LK  LT + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE +    I +  I  E  +AD FTK L    F      
Subjt:  DACEAAKEAVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHG

Query:  LGL
        LGL
Subjt:  LGL

P0CV72 Secreted RxLR effector protein 1611.4e-2342.11Show/hide
Query:  MSNILYASTVGSLMYAMLCTRPDICYLVGIVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLI-LTGYTDSDFQTDKDAKKFTSGSVFTLNGGA
        M N+ Y S VG++MY M+ TRPD+   VG++S++ S+P   +W A+K +++YL+ T+ Y L +       L GY+D+D+  D ++++ TSG +F LNGG 
Subjt:  MSNILYASTVGSLMYAMLCTRPDICYLVGIVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLI-LTGYTDSDFQTDKDAKKFTSGSVFTLNGGA

Query:  VVWRSIKQPCIANSTMEAQYVDACEAAKEAVCL
        V WRS KQ  +A S+ E +Y+   EA +EAV L
Subjt:  VVWRSIKQPCIANSTMEAQYVDACEAAKEAVCL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-6243.01Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        MKDLG    +L ++IVR   ++ L + Q  YI+++L R+ M+N+K    P    + LSK+ CP T +E  +M+ + Y+S VGSLMYAM+CTRPDI + VG
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA
        +VSR+  NP +++W AVK I++YLR T    L +G  D IL GYTD+D   D D +K ++G +FT +GGA+ W+S  Q C+A ST EA+Y+ A E  KE 
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEA

Query:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFE
        + LK+FL +L +    ++   +YCD+  A+  S+    H R KHI+ +YH IRE++    + V KIS  +N AD  TK +    FE
Subjt:  VCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.8e-2730.51Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        +KD   + Y L I+  R      L + Q  YI  +L+R  M  +K    P      LS     K     E      Y   VGSL Y +  TRPDI Y V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDY-MLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKE
         +S++   P  ++  A+K I++YL  T ++ + +     L L  Y+D+D+  DKD    T+G +  L    + W S KQ  +  S+ EA+Y      + E
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDY-MLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKE

Query:  AVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGL
           +   LT+L +   +  P  +YCDN GA      P  H R KHI   YH IR  +  G + V  +S    +AD  TK L+   F++    +G+
Subjt:  AVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.0e-2930.17Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        +K+  ++ Y L I+  R  +   L + Q  Y   +L+R  M  +K    P      L+     K P   E      Y   VGSL Y +  TRPD+ Y V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDY-MLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKE
         +S+Y   P  D+W A+K +++YL  T D+ + +     L L  Y+D+D+  D D    T+G +  L    + W S KQ  +  S+ EA+Y      + E
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDY-MLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKE

Query:  AVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGL
           +   LT+L +   +  P  +YCDN GA      P  H R KHI   YH IR  +  G + V  +S    +AD  TK L+   F++    +G+
Subjt:  AVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.1e-2226.5Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG
        ++DLG + Y L ++I R+     + +CQ  Y   +L    +   K   +P    +  S           + +    Y   +G LMY  + TR DI + V 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVG

Query:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYK-DLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKE
         +S++   PR  +  AV  I+ Y++ T    L Y  + ++ L  ++D+ FQ+ KD ++ T+G    L    + W+S KQ  ++ S+ EA+Y     A  E
Subjt:  IVSRYQSNPRRDYWTAVKNIIKYLRRTKDYMLMYGYK-DLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKE

Query:  AVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE-IIHRGDITVTKISFEQNMADPFTKALT
         + L +F  +L++   +  P  L+CDN+ A+  +     H+R KHIE   H +RE  +++  ++ +  ++++   D FT+ L+
Subjt:  AVCLKKFLTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE-IIHRGDITVTKISFEQNMADPFTKALT

ATMG00810.1 DNA/RNA polymerases superfamily protein9.0e-1330.05Show/hide
Query:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSK--KDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYL
        MKDLG V Y L IQI + H +  L + QT Y ++IL+   M + K     LP +    +S  + P       D S+  + S VG+L Y  L TRPDI Y 
Subjt:  MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSK--KDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYL

Query:  VGIVSRYQSNPRRDYWTAVKNIIKYLRRTKDY-MLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQY
        V IV +    P    +  +K +++Y++ T  + + ++    L +  + DSD+      ++ T+G    L    + W + +QP ++ S+ E +Y
Subjt:  VGIVSRYQSNPRRDYWTAVKNIIKYLRRTKDY-MLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATTTAGGAAATGTCCCATATGTTCTTAGTATCCAAATAGTTCGAAACCATAAGAACAAAACTCTAGCCATGTGTCAAACATCTTATATAGACAAAATATTATC
AAGATATAAGATGCAGAATTCCAAAAAGGATCTGTTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTA
ACATTCTCTATGCTTCTACTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTTAGTGGGGATAGTTAGTAGATATCAGTCTAATCCTAGA
CGTGATTATTGGACAGCCGTTAAGAATATTATAAAATATCTTAGAAGAACAAAAGACTACATGCTTATGTATGGTTATAAGGATCTGATCCTTACTGGATACACTGACTC
CGATTTCCAAACTGATAAAGATGCTAAAAAGTTTACATCAGGATCAGTTTTCACTCTAAATGGAGGAGCAGTAGTATGGAGAAGCATAAAACAACCCTGTATTGCCAACT
CCACTATGGAAGCTCAATATGTAGATGCCTGTGAAGCAGCAAAAGAAGCAGTATGCCTTAAAAAGTTCTTAACAGATTTGGAAGTTGTTCCAAATATGCATCTGCCAATC
ACCTTGTACTGTGATAATAGTGGTGCAGTTGCAAATTCACGAGAACCTAGAAGTCATAAACGTGGAAAGCACATTGAACGAAAGTACCATCTTATCAGGGAAATCATACA
TCGAGGAGACATTACAGTAACAAAAATCTCCTTTGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGACTAAAGTGTTTGAAAGCCACCTACATGGTTTAGGTC
TACGTGGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATTTAGGAAATGTCCCATATGTTCTTAGTATCCAAATAGTTCGAAACCATAAGAACAAAACTCTAGCCATGTGTCAAACATCTTATATAGACAAAATATTATC
AAGATATAAGATGCAGAATTCCAAAAAGGATCTGTTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTA
ACATTCTCTATGCTTCTACTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTTAGTGGGGATAGTTAGTAGATATCAGTCTAATCCTAGA
CGTGATTATTGGACAGCCGTTAAGAATATTATAAAATATCTTAGAAGAACAAAAGACTACATGCTTATGTATGGTTATAAGGATCTGATCCTTACTGGATACACTGACTC
CGATTTCCAAACTGATAAAGATGCTAAAAAGTTTACATCAGGATCAGTTTTCACTCTAAATGGAGGAGCAGTAGTATGGAGAAGCATAAAACAACCCTGTATTGCCAACT
CCACTATGGAAGCTCAATATGTAGATGCCTGTGAAGCAGCAAAAGAAGCAGTATGCCTTAAAAAGTTCTTAACAGATTTGGAAGTTGTTCCAAATATGCATCTGCCAATC
ACCTTGTACTGTGATAATAGTGGTGCAGTTGCAAATTCACGAGAACCTAGAAGTCATAAACGTGGAAAGCACATTGAACGAAAGTACCATCTTATCAGGGAAATCATACA
TCGAGGAGACATTACAGTAACAAAAATCTCCTTTGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGACTAAAGTGTTTGAAAGCCACCTACATGGTTTAGGTC
TACGTGGTTTGTAA
Protein sequenceShow/hide protein sequence
MKDLGNVPYVLSIQIVRNHKNKTLAMCQTSYIDKILSRYKMQNSKKDLLPYRYGIHLSKEQCPKTPQEVEDMSNILYASTVGSLMYAMLCTRPDICYLVGIVSRYQSNPR
RDYWTAVKNIIKYLRRTKDYMLMYGYKDLILTGYTDSDFQTDKDAKKFTSGSVFTLNGGAVVWRSIKQPCIANSTMEAQYVDACEAAKEAVCLKKFLTDLEVVPNMHLPI
TLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIIHRGDITVTKISFEQNMADPFTKALTTKVFESHLHGLGLRGL