; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0100201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0100201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy1-copia retrotransposon protein
Genome locationCMiso1.1chr04:16062267..16062956
RNA-Seq ExpressionCmc04g0100201
SyntenyCmc04g0100201
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045258.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]3.8e-11491.27Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MNANASS  YVIESVNLWHGR+GHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFK V SRTIDLLELIHSDLA+F+TTTSR  KNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIKTKDEAGSMFLKF AES+NQLGKKIKRLR DRGGEYS+KTLKDF +SNGIIHEFTAPYSPQQNGIAERK+RTLKEMMNAMLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACFVLNRI HK +DKTPYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

KAA0053084.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]2.2e-11490.39Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MN NASSS YVIE VNLWHGR+GHVNFASIRKLKDLRLINTS+SHETGKCPICVESKFHKKPFK V+SRT DLLELIHSDLA+FKTTTSRG KNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIK KDEAGSMFLKFKAES+NQLGKKIKRLRSDRGGEYS+KTLKDF +SNG+ HEFTAPY PQQNGIAERK+RTLKEMMN MLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACFVLNRIPHK+LDKTPYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

KAA0058501.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]4.2e-11389.08Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MNAN SSSAY+IES NLWHGR+GHVNFASIRKLKDLRLINTSESHETGKCPIC+ESKFHKKPFK V+ RT +LLELIHSDLA+F+TTTSRGSKNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIKTK+EA SMFLKFKAES+NQLGK+IKRLRSDRGGEYS+KTLK+F +SNGIIHEFTAPYSPQQNGIAERK+RTLKEMMNAMLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACF+LNRIPHK LDK PYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

TYK07244.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]4.2e-11389.08Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MNAN SSSAY+IES NLWHGR+GHVNFASIRKLKDLRLINTSESHETGKCPIC+ESKFHKKPFK V+ RT +LLELIHSDLA+F+TTTSRGSKNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIKTK+EA SMFLKFKAES+NQLGK+IKRLRSDRGGEYS+KTLK+F +SNGIIHEFTAPYSPQQNGIAERK+RTLKEMMNAMLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACF+LNRIPHK LDK PYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

TYK29957.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]2.2e-11490.39Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MN NASSS YVIE VNLWHGR+GHVNFASIRKLKDLRLINTS+SHETGKCPICVESKFHKKPFK V+SRT DLLELIHSDLA+FKTTTSRG KNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIK KDEAGSMFLKFKAES+NQLGKKIKRLRSDRGGEYS+KTLKDF +SNG+ HEFTAPY PQQNGIAERK+RTLKEMMN MLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACFVLNRIPHK+LDKTPYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

TrEMBL top hitse value%identityAlignment
A0A5A7TQW7 Ty1-copia retrotransposon protein1.9e-11491.27Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MNANASS  YVIESVNLWHGR+GHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFK V SRTIDLLELIHSDLA+F+TTTSR  KNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIKTKDEAGSMFLKF AES+NQLGKKIKRLR DRGGEYS+KTLKDF +SNGIIHEFTAPYSPQQNGIAERK+RTLKEMMNAMLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACFVLNRI HK +DKTPYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

A0A5A7UCV4 Ty1-copia retrotransposon protein1.1e-11490.39Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MN NASSS YVIE VNLWHGR+GHVNFASIRKLKDLRLINTS+SHETGKCPICVESKFHKKPFK V+SRT DLLELIHSDLA+FKTTTSRG KNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIK KDEAGSMFLKFKAES+NQLGKKIKRLRSDRGGEYS+KTLKDF +SNG+ HEFTAPY PQQNGIAERK+RTLKEMMN MLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACFVLNRIPHK+LDKTPYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

A0A5A7UYD5 Ty1-copia retrotransposon protein2.1e-11389.08Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MNAN SSSAY+IES NLWHGR+GHVNFASIRKLKDLRLINTSESHETGKCPIC+ESKFHKKPFK V+ RT +LLELIHSDLA+F+TTTSRGSKNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIKTK+EA SMFLKFKAES+NQLGK+IKRLRSDRGGEYS+KTLK+F +SNGIIHEFTAPYSPQQNGIAERK+RTLKEMMNAMLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACF+LNRIPHK LDK PYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

A0A5D3C7N0 Ty1-copia retrotransposon protein2.1e-11389.08Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MNAN SSSAY+IES NLWHGR+GHVNFASIRKLKDLRLINTSESHETGKCPIC+ESKFHKKPFK V+ RT +LLELIHSDLA+F+TTTSRGSKNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIKTK+EA SMFLKFKAES+NQLGK+IKRLRSDRGGEYS+KTLK+F +SNGIIHEFTAPYSPQQNGIAERK+RTLKEMMNAMLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACF+LNRIPHK LDK PYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

A0A5D3E1H3 Ty1-copia retrotransposon protein1.1e-11490.39Show/hide
Query:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV
        MN NASSS YVIE VNLWHGR+GHVNFASIRKLKDLRLINTS+SHETGKCPICVESKFHKKPFK V+SRT DLLELIHSDLA+FKTTTSRG KNYYVSFV
Subjt:  MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFV

Query:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD
        DDYSRFT IYLIK KDEAGSMFLKFKAES+NQLGKKIKRLRSDRGGEYS+KTLKDF +SNG+ HEFTAPY PQQNGIAERK+RTLKEMMN MLLSSGLSD
Subjt:  DDYSRFTNIYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSD

Query:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL
        NMWGEAVLSACFVLNRIPHK+LDKTPYEL
Subjt:  NMWGEAVLSACFVLNRIPHKNLDKTPYEL

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.2e-3236.16Show/hide
Query:  LWHGRIGHVNFASIRKLK------DLRLINTSESHETGKCPICVESKFHKKPFKSVKSRT--IDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTN
        LWH R GH++   + ++K      D  L+N  E      C  C+  K  + PFK +K +T     L ++HSD+    T  +   KNY+V FVD ++ +  
Subjt:  LWHGRIGHVNFASIRKLK------DLRLINTSESHETGKCPICVESKFHKKPFKSVKSRT--IDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTN

Query:  IYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVL
         YLIK K +  SMF  F A+S+     K+  L  D G EY +  ++ F    GI +  T P++PQ NG++ER  RT+ E    M+  + L  + WGEAVL
Subjt:  IYLIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVL

Query:  SACFVLNRIPHKNL---DKTPYEL
        +A +++NRIP + L    KTPYE+
Subjt:  SACFVLNRIPHKNL---DKTPYEL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-4139.51Show/hide
Query:  SVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTNIYLIK
        SV+LWH R+GH++   ++ L    LI+ ++      C  C+  K H+  F++   R +++L+L++SD+       S G   Y+V+F+DD SR   +Y++K
Subjt:  SVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTNIYLIK

Query:  TKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVLSACFV
        TKD+   +F KF A  + + G+K+KRLRSD GGEY+++  +++  S+GI HE T P +PQ NG+AER +RT+ E + +ML  + L  + WGEAV +AC++
Subjt:  TKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVLSACFV

Query:  LNRIP
        +NR P
Subjt:  LNRIP

Q12491 Transposon Ty2-B Gag-Pol polyprotein2.8e-1929.28Show/hide
Query:  LWHGRIGHVNFASIRK-LKDLRLINTSESH------ETGKCPICVESKF----HKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSR
        L H  +GH NF SI+K LK   +    ES        T +CP C+  K     H K  +     + +  + +H+D+        + + +Y++SF D+ +R
Subjt:  LWHGRIGHVNFASIRK-LKDLRLINTSESH------ETGKCPICVESKF----HKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSR

Query:  FTNIYLIKTKDEAG--SMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMW
        F  +Y +  + E    ++F    A  KNQ   ++  ++ DRG EY+NKTL  F+ + GI   +T     + +G+AER +RTL      +L  SGL +++W
Subjt:  FTNIYLIKTKDEAG--SMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMW

Query:  GEAVLSACFVLNRIPHKNLDKT
          AV  +  + N +     DK+
Subjt:  GEAVLSACFVLNRIPHKNLDKT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.3e-2130.2Show/hide
Query:  WHGRIGHVNFASIRK-LKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTNIYLIKTKD
        WH R+GH   + +   + +  L   + SH+   C  C+ +K +K PF      +   LE I+SD+ +     S  +  YYV FVD ++R+T +Y +K K 
Subjt:  WHGRIGHVNFASIRK-LKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTNIYLIKTKD

Query:  EAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVLSACFVLNR
        +    F+ FK   +N+   +I    SD GGE+    L +++  +GI H  + P++P+ NG++ERK R + E    +L  + +    W  A   A +++NR
Subjt:  EAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVLSACFVLNR

Query:  IP
        +P
Subjt:  IP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.8e-2432.67Show/hide
Query:  WHGRIGHVNFASIRK-LKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTNIYLIKTKD
        WH R+GH + A +   + +  L   + SH+   C  C  +K HK PF +    +   LE I+SD+ +     S  +  YYV FVD ++R+T +Y +K K 
Subjt:  WHGRIGHVNFASIRK-LKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTNIYLIKTKD

Query:  EAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVLSACFVLNR
        +    F+ FK+  +N+   +I  L SD GGE+    L+D+   +GI H  + P++P+ NG++ERK R + EM   +L  + +    W  A   A +++NR
Subjt:  EAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVLSACFVLNR

Query:  IP
        +P
Subjt:  IP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAAATGCTTCTAGTTCTGCCTACGTGATTGAATCTGTTAACTTATGGCATGGTAGAATAGGACATGTGAACTTTGCATCAATTAGGAAACTTAAGGACTTGAG
ACTTATTAATACTTCTGAGTCGCATGAAACTGGTAAATGCCCTATTTGTGTAGAAAGTAAATTCCATAAGAAACCTTTCAAATCAGTTAAATCTAGAACTATTGATCTGT
TAGAATTAATTCACTCGGATCTAGCCAATTTTAAAACCACTACTAGTAGAGGTAGTAAAAACTACTATGTATCTTTTGTTGATGACTACTCTAGATTTACTAACATATAC
TTGATAAAAACAAAAGATGAAGCTGGTAGTATGTTTTTAAAATTTAAGGCAGAATCTAAAAATCAGTTAGGAAAAAAGATAAAAAGATTAAGATCAGATAGAGGTGGTGA
GTATTCTAATAAAACTCTTAAAGACTTTTATAAGTCGAACGGTATTATCCATGAATTTACTGCTCCTTACTCACCACAACAAAATGGCATAGCAGAACGAAAAAGTAGAA
CTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCCGGTCTATCTGATAATATGTGGGGAGAAGCTGTGTTGTCTGCGTGTTTCGTTCTTAACAGGATTCCCCACAAA
AATCTAGACAAAACTCCCTACGAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAAATGCTTCTAGTTCTGCCTACGTGATTGAATCTGTTAACTTATGGCATGGTAGAATAGGACATGTGAACTTTGCATCAATTAGGAAACTTAAGGACTTGAG
ACTTATTAATACTTCTGAGTCGCATGAAACTGGTAAATGCCCTATTTGTGTAGAAAGTAAATTCCATAAGAAACCTTTCAAATCAGTTAAATCTAGAACTATTGATCTGT
TAGAATTAATTCACTCGGATCTAGCCAATTTTAAAACCACTACTAGTAGAGGTAGTAAAAACTACTATGTATCTTTTGTTGATGACTACTCTAGATTTACTAACATATAC
TTGATAAAAACAAAAGATGAAGCTGGTAGTATGTTTTTAAAATTTAAGGCAGAATCTAAAAATCAGTTAGGAAAAAAGATAAAAAGATTAAGATCAGATAGAGGTGGTGA
GTATTCTAATAAAACTCTTAAAGACTTTTATAAGTCGAACGGTATTATCCATGAATTTACTGCTCCTTACTCACCACAACAAAATGGCATAGCAGAACGAAAAAGTAGAA
CTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCCGGTCTATCTGATAATATGTGGGGAGAAGCTGTGTTGTCTGCGTGTTTCGTTCTTAACAGGATTCCCCACAAA
AATCTAGACAAAACTCCCTACGAACTCTGA
Protein sequenceShow/hide protein sequence
MNANASSSAYVIESVNLWHGRIGHVNFASIRKLKDLRLINTSESHETGKCPICVESKFHKKPFKSVKSRTIDLLELIHSDLANFKTTTSRGSKNYYVSFVDDYSRFTNIY
LIKTKDEAGSMFLKFKAESKNQLGKKIKRLRSDRGGEYSNKTLKDFYKSNGIIHEFTAPYSPQQNGIAERKSRTLKEMMNAMLLSSGLSDNMWGEAVLSACFVLNRIPHK
NLDKTPYEL