CuGenDBv2

Gene ID	Cmc04g0100621
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome c maturase subunit Fc
Genome location	CMiso1.1chr04:16622052..16622354
RNA-Seq Expression	Cmc04g0100621
Synteny	Cmc04g0100621
Gene Ontology terms	GO:0017004 - cytochrome complex assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR044955 - Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein

Homology

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GenBank top hits

e value

%identity

Alignment

AEN56115.1 cytochrome c biogenesis FC [Cucumis melo subsp. melo]

2.3e-39

86.81

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF ASY+NGKL+HFL+QWMIGFLRFHQNLWL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

AZP40277.1 cytochrome c biogenesis FC [Cucumis melo var. momordica]

2.3e-39

86.81

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF ASY+NGKL+HFL+QWMIGFLRFHQNLWL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

KAA0034867.1 cytochrome c biogenesis FC [Cucumis melo var. makuwa]

2.3e-39

86.81

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF ASY+NGKL+HFL+QWMIGFLRFHQNLWL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

QPK67042.1 cytochrome c biogenesis F [Erodium trifolium]

1.0e-31

75.82

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPT H ICGNLMIYK SLTKD+LIF HD+ LRAD LPINFLASY+NGKL+HFL++WM    R HQN WL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

YP_004849321.1 cytochrome c biogenesis FC [Cucumis sativus]

8.2e-37

82.42

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKER CLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF A Y+NGKL+HFL+QWMIGFLRFH+NLW  MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

TrEMBL top hits

e value

%identity

Alignment

A0A3S5HPI5 Cytochrome c biogenesis FC

1.1e-39

86.81

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF ASY+NGKL+HFL+QWMIGFLRFHQNLWL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

A0A5D3BCJ7 Cytochrome c biogenesis FC (Mitochondrion)

1.1e-39

86.81

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF ASY+NGKL+HFL+QWMIGFLRFHQNLWL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

A0A7U3SUR1 Cytochrome c biogenesis F

5.0e-32

75.82

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPT H ICGNLMIYK SLTKD+LIF HD+ LRAD LPINFLASY+NGKL+HFL++WM    R HQN WL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

G3EIX3 Cytochrome c biogenesis FC

4.0e-37

82.42

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKER CLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF A Y+NGKL+HFL+QWMIGFLRFH+NLW  MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

G3EU31 Cytochrome c biogenesis FC

1.1e-39

86.81

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPTSH ICGNLMIYK SLTKD+LIF HDKELRADQLPINF ASY+NGKL+HFL+QWMIGFLRFHQNLWL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

SwissProt top hits

e value

%identity

Alignment

P38451 Uncharacterized mitochondrial protein ymf2

9.2e-07

60.47

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHD
        +GK R  LRG+D LHGPT H ICGN +IYK SL K   +F HD
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHD

P93286 Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein

1.6e-30

70.33

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Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPT H ICGNLMIYK SLT D+L+F HD+ L AD L INF ASYKNGKL+HFL+ WM    R H N WL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00180.1 cytochrome C biogenesis 452

1.4e-31

70.33

Show/hide

Query:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK
        MGKERCCLRGLDHLHGPT H ICGNLMIYK SLT D+L+F HD+ L AD L INF ASYKNGKL+HFL+ WM    R H N WL MF +K+
Subjt:  MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKK

Sequences

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CDS sequence

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ATGGGGAAGGAGCGTTGTTGTTTGCGAGGTCTCGATCATTTACATGGACCCACTTCTCATTTCATTTGTGGTAATTTGATGATCTATAAATTGTCCCTAACTAAGGATCA
ACTCATCTTTTTGCATGATAAAGAACTTCGTGCCGACCAGTTGCCAATCAACTTTTTGGCTTCATATAAGAATGGAAAACTGAAGCATTTTTTGTATCAATGGATGATAG
GCTTTCTTCGCTTTCATCAAAATTTATGGTTGATCATGTTCCAAAAAAAAAAGATACTTTTGAGAAAGGACAAGCACGACTGA

mRNA sequence

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Protein sequence

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MGKERCCLRGLDHLHGPTSHFICGNLMIYKLSLTKDQLIFLHDKELRADQLPINFLASYKNGKLKHFLYQWMIGFLRFHQNLWLIMFQKKKILLRKDKHD

Cmc04g0100621 (gene) of Melon (Charmono) v1.1 genome