CuGenDBv2

Gene ID	Cmc04g0100651
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	KH domain-containing protein
Genome location	CMiso1.1chr04:16726303..16726678
RNA-Seq Expression	Cmc04g0100651
Synteny	Cmc04g0100651
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0016020 - membrane (cellular component) GO:1990904 - ribonucleoprotein complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0051174.1 KH domain-containing protein [Cucumis melo var. makuwa]

1.6e-39

95.6

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLV+LFVLLYL LSADGSNSLSYDGREGKRHGRGHSYSSGY GFNDLVGDVYGSY+GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL

TYK03725.1 KH domain-containing protein [Cucumis melo var. makuwa]

2.6e-37

93.41

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVL VLLYLPLSADGSNSLSYD REGKRHGRGH YSSGY GFNDL GDVYGSY GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL

XP_008459330.1 PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Cucumis melo]

1.6e-26

79.12

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG
        MVQ+   +LDVAKEAL+HIVT+LRANLF RE AL  VL VL YLPLSADGS+SLSYDGREGKRHGRGHSYSSGY GFNDL  GD YGSY G
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG

XP_011655998.1 KH domain-containing protein HEN4 [Cucumis sativus]

1.2e-26

80.22

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG
        MVQ+   +LDVAKEALVHIVT+LRANLF RE AL  VL VL YLPLSADGS+SLSYDGREGKRHGRGHSYSSGY GFNDL  GD YGSY G
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG

XP_016900407.1 PREDICTED: uncharacterized protein LOC107990890, partial [Cucumis melo]

2.6e-37

93.41

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVL VLLYLPLSADGSNSLSYD REGKRHGRGH YSSGY GFNDL GDVYGSY GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVM1 Uncharacterized protein

5.8e-27

80.22

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG
        MVQ+   +LDVAKEALVHIVT+LRANLF RE AL  VL VL YLPLSADGS+SLSYDGREGKRHGRGHSYSSGY GFNDL  GD YGSY G
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG

A0A1S4DWP9 uncharacterized protein LOC107990890

1.2e-37

93.41

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVL VLLYLPLSADGSNSLSYD REGKRHGRGH YSSGY GFNDL GDVYGSY GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL

A0A5A7TBQ7 KH domain-containing protein

7.6e-27

79.12

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG
        MVQ+   +LDVAKEAL+HIVT+LRANLF RE AL  VL VL YLPLSADGS+SLSYDGREGKRHGRGHSYSSGY GFNDL  GD YGSY G
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLV-GDVYGSYRG

A0A5A7U784 KH domain-containing protein

7.8e-40

95.6

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLV+LFVLLYL LSADGSNSLSYDGREGKRHGRGHSYSSGY GFNDLVGDVYGSY+GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL

A0A5D3BXA0 KH domain-containing protein

1.2e-37

93.41

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVL VLLYLPLSADGSNSLSYD REGKRHGRGH YSSGY GFNDL GDVYGSY GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G15270.1 RNA-binding KH domain-containing protein

4.4e-11

43.18

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSY
        MVQ+   ELDVAKEAL+ I ++LRAN+F RE A+  ++ VL Y+P++ D  +   YD R+ +R  RG+ Y  GY G + +  + Y  Y
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSY

AT5G15270.2 RNA-binding KH domain-containing protein

4.4e-11

43.18

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSY
        MVQ+   ELDVAKEAL+ I ++LRAN+F RE A+  ++ VL Y+P++ D  +   YD R+ +R  RG+ Y  GY G + +  + Y  Y
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSY

Sequences

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CDS sequence

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ATGGTTCAGTTAGATATATGGGAACTTGATGTTGCCAAGGAGGCTCTTGTACATATAGTGACCAAGCTTAGAGCTAACCTTTTTTATAGAGAAGACGCTCTCTTA
GTCGTTTTGTTTGTTCTGTTGTATCTTCCTCTGTCAGCTGATGGTTCAAATAGTCTTAGCTACGATGGTAGAGAAGGTAAAAGACATGGGCGTGGGCATTCATAT
TCAAGTGGTTATGAGGGTTTCAATGATTTGGTTGGTGATGTTTATGGAAGCTACAGAGGCTTATAG

mRNA sequence

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Protein sequence

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MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLFVLLYLPLSADGSNSLSYDGREGKRHGRGHSYSSGYEGFNDLVGDVYGSYRGL

Cmc04g0100651 (gene) of Melon (Charmono) v1.1 genome