| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032291.1 gag/pol protein [Cucumis melo var. makuwa] | 8.8e-97 | 88.12 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYS+GIVSRYQSNPGRDHW AVKNILKYLRKTKDYMLVYGSKDLIL G+TDSDFQ DKDA KSTSGSVFTLNGGAVVWRSIKQSC+ STMEAEYVAAC+
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
A KEAVWLKKFL DLEVVPNMHL ITLYCDNSG VANSREP+SHKR K+IERKYHLIREI+H+GDV VTKISSEQNMADPFTKAL AKVFESHLH L L
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
Query: GL
GL
Subjt: GL
|
|
| KAA0051362.1 gag/pol protein [Cucumis melo var. makuwa] | 6.5e-100 | 85.85 | Show/hide |
Query: MQCYVLDLTFCYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADST
M C + D+ CYS+GIVSRYQSNP RDHWTA+KNILKYLR+TKDYMLVYGSKDLIL GYTDSDFQTDKD KSTSGSVFTLNGGA+VWRSI+QSC+ DS
Subjt: MQCYVLDLTFCYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADST
Query: MEAEYVAACKAGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVF
MEAEYVA C+A KEAVWLKKFL DLEVVPNMHLPITLYCDNSG VANSREP+SHKREK IERKYHLIR+IVHRGDVTVTKISSEQNM DPFTKAL AKVF
Subjt: MEAEYVAACKAGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVF
Query: ESHLHGLSLRGL
ESHLHGL LRGL
Subjt: ESHLHGLSLRGL
|
|
| KAA0054281.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-97 | 87.62 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYS+G+VSRYQSNPGRDHWTAVKNILKYLR+ KDYMLVYGSKDLIL GYTDSDFQTDKDA KSTSGSVFTLN GAVVWRSIKQS + DSTMEAEYVAACK
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
A KEAVWLKKFL LEVV NMH+PIT+YCDNSG +ANSREP+SHKR K+IER+YHLIREI+HRGDVTVTKISSEQNM DPFTKALTAKVFESHLHGL LR
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
Query: GL
GL
Subjt: GL
|
|
| KAA0063026.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-97 | 88.94 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYSIGI+SRYQSNPGRDHWT VKNILKYLR+TKDYMLVYGSKDLIL GYTDSDFQTDKD KSTSGSVFTLNGG VVWRSIKQSC+A+STMEAEYVAAC+
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSL
A KEAVWLKKFLIDLEVVPNMHL ITLYCDNS VV NSREP SHKR K+IE+KYH+IR+IVHRGDVTVTKISSEQNMADPFTKALTAKVFES+LHGL L
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSL
|
|
| TYK14976.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-97 | 87.62 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYS+G+VSRYQSNPGRDHWTAVKNILKYLR+ KDYMLVYGSKDLIL GYTDSDFQTDKDA KSTSGSVFTLN GAVVWRSIKQS + DSTMEAEYVAACK
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
A KEAVWLKKFL LEVV NMH+PIT+YCDNSG +ANSREP+SHKR K+IER+YHLIREI+HRGDVTVTKISSEQNM DPFTKALTAKVFESHLHGL LR
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
Query: GL
GL
Subjt: GL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRW5 Gag/pol protein | 4.2e-97 | 88.12 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYS+GIVSRYQSNPGRDHW AVKNILKYLRKTKDYMLVYGSKDLIL G+TDSDFQ DKDA KSTSGSVFTLNGGAVVWRSIKQSC+ STMEAEYVAAC+
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
A KEAVWLKKFL DLEVVPNMHL ITLYCDNSG VANSREP+SHKR K+IERKYHLIREI+H+GDV VTKISSEQNMADPFTKAL AKVFESHLH L L
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
Query: GL
GL
Subjt: GL
|
|
| A0A5A7U6B9 Gag/pol protein | 3.1e-100 | 85.85 | Show/hide |
Query: MQCYVLDLTFCYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADST
M C + D+ CYS+GIVSRYQSNP RDHWTA+KNILKYLR+TKDYMLVYGSKDLIL GYTDSDFQTDKD KSTSGSVFTLNGGA+VWRSI+QSC+ DS
Subjt: MQCYVLDLTFCYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADST
Query: MEAEYVAACKAGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVF
MEAEYVA C+A KEAVWLKKFL DLEVVPNMHLPITLYCDNSG VANSREP+SHKREK IERKYHLIR+IVHRGDVTVTKISSEQNM DPFTKAL AKVF
Subjt: MEAEYVAACKAGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVF
Query: ESHLHGLSLRGL
ESHLHGL LRGL
Subjt: ESHLHGLSLRGL
|
|
| A0A5A7UL66 Gag/pol protein | 6.6e-98 | 87.62 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYS+G+VSRYQSNPGRDHWTAVKNILKYLR+ KDYMLVYGSKDLIL GYTDSDFQTDKDA KSTSGSVFTLN GAVVWRSIKQS + DSTMEAEYVAACK
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
A KEAVWLKKFL LEVV NMH+PIT+YCDNSG +ANSREP+SHKR K+IER+YHLIREI+HRGDVTVTKISSEQNM DPFTKALTAKVFESHLHGL LR
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
Query: GL
GL
Subjt: GL
|
|
| A0A5A7V9B0 Gag/pol protein | 8.6e-98 | 88.94 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYSIGI+SRYQSNPGRDHWT VKNILKYLR+TKDYMLVYGSKDLIL GYTDSDFQTDKD KSTSGSVFTLNGG VVWRSIKQSC+A+STMEAEYVAAC+
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSL
A KEAVWLKKFLIDLEVVPNMHL ITLYCDNS VV NSREP SHKR K+IE+KYH+IR+IVHRGDVTVTKISSEQNMADPFTKALTAKVFES+LHGL L
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSL
|
|
| A0A5D3CX07 Gag/pol protein | 6.6e-98 | 87.62 | Show/hide |
Query: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
CYS+G+VSRYQSNPGRDHWTAVKNILKYLR+ KDYMLVYGSKDLIL GYTDSDFQTDKDA KSTSGSVFTLN GAVVWRSIKQS + DSTMEAEYVAACK
Subjt: CYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
A KEAVWLKKFL LEVV NMH+PIT+YCDNSG +ANSREP+SHKR K+IER+YHLIREI+HRGDVTVTKISSEQNM DPFTKALTAKVFESHLHGL LR
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLHGLSLR
Query: GL
GL
Subjt: GL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.0e-28 | 37.07 | Show/hide |
Query: MQCYVLDLTFCYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLI----LIGYTDSDFQTDKDATKSTSGSVFTL-NGGAVVWRSIKQSC
M C DLT ++ I+SRY S + W +K +L+YL+ T D L++ K+L +IGY DSD+ + KST+G +F + + + W + +Q+
Subjt: MQCYVLDLTFCYSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLI----LIGYTDSDFQTDKDATKSTSGSVFTL-NGGAVVWRSIKQSC
Query: VADSTMEAEYVAACKAGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKAL
VA S+ EAEY+A +A +EA+WLK L + + + PI +Y DN G ++ + P HKR K+I+ KYH RE V + + I +E +AD FTK L
Subjt: VADSTMEAEYVAACKAGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKAL
Query: TAKVF
A F
Subjt: TAKVF
|
|
| P0CV72 Secreted RxLR effector protein 161 | 2.0e-19 | 44.86 | Show/hide |
Query: SIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLI-LIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACKA
++G++S++ S+P HW A+K +L+YL+ T+ Y L + L+GY+D+D+ D ++ +STSG +F LNGG V WRS KQ VA S+ E EY+A +A
Subjt: SIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLI-LIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACKA
Query: GKEAVWL
+EAVWL
Subjt: GKEAVWL
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.2e-41 | 45.26 | Show/hide |
Query: YSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACKA
+++G+VSR+ NPG++HW AVK IL+YLR T L +G D IL GYTD+D D D KS++G +FT +GGA+ W+S Q CVA ST EAEY+AA +
Subjt: YSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDYMLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACKA
Query: GKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFE
GKE +WLK+FL +L + ++ +YCD+ + S+ H R K+I+ +YH IRE+V + V KIS+ +N AD TK + FE
Subjt: GKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFE
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.3e-22 | 32.29 | Show/hide |
Query: YSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDY-MLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Y++ +S++ P +H A+K IL+YL T ++ + + L L Y+D+D+ DKD ST+G + L + W S KQ V S+ EAEY +
Subjt: YSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDY-MLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFES
E W+ L +L + + P +YCDN G P H R K+I YH IR V G + V +S+ +AD TK L+ F++
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFES
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.7e-24 | 33.33 | Show/hide |
Query: YSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDY-MLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Y++ +S+Y P DHW A+K +L+YL T D+ + + L L Y+D+D+ D D ST+G + L + W S KQ V S+ EAEY +
Subjt: YSIGIVSRYQSNPGRDHWTAVKNILKYLRKTKDY-MLVYGSKDLILIGYTDSDFQTDKDATKSTSGSVFTLNGGAVVWRSIKQSCVADSTMEAEYVAACK
Query: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFES
E W+ L +L + + P +YCDN G P H R K+I YH IR V G + V +S+ +AD TK L+ F++
Subjt: AGKEAVWLKKFLIDLEVVPNMHLPITLYCDNSGVVANSREPKSHKREKYIERKYHLIREIVHRGDVTVTKISSEQNMADPFTKALTAKVFES
|
|
