CuGenDBv2

Gene ID	Cmc04g0100741
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	CMiso1.1chr04:16874790..16875173
RNA-Seq Expression	Cmc04g0100741
Synteny	Cmc04g0100741
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR008906 - HAT, C-terminal dimerisation domain IPR012337 - Ribonuclease H-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031868.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Cucumis melo var. makuwa]

5.5e-62

96.83

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEEVDPWITFCALREEE+SMEVENDLTSYLSDKDVVDKEE DIMYWWKMNAYKYPILSTIVRDVL VPISTVASESAFSTGERILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TVETLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

KAA0033850.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo var. makuwa]

7.2e-62

96.03

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEE+DPWITFCALREEE+SMEVENDLTSYLSDKDVVDKEEFDIMYWWKMN YKYPILSTIVRDVLTVPISTVASESAFSTG RILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TVETLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

KAA0064040.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

3.9e-60

93.65

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEE+DPWITFCALREEE+SMEVENDLTSYL DKDVVDKEEFDIMYWWKMN YKYPILSTIVRDVL VPISTVASESAFSTG RILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TV+TLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

TYK03706.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo var. makuwa]

3.2e-62

96.85

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEEVDPWITFCALREEENSMEVENDLTSYL DKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTG RILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLEG
        TVETLICTQNWI+G SVLLDLHPQLEG
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLEG

TYK09522.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

5.5e-62

96.83

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEEVDPWITFCALREEE+SMEVENDLTSYLSDKDVVDKEE DIMYWWKMNAYKYPILSTIVRDVL VPISTVASESAFSTGERILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TVETLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMK5 Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2

2.7e-62

96.83

Show/hide

Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEEVDPWITFCALREEE+SMEVENDLTSYLSDKDVVDKEE DIMYWWKMNAYKYPILSTIVRDVL VPISTVASESAFSTGERILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TVETLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

A0A5A7SSC6 Zinc finger BED domain-containing protein RICESLEEPER 1-like

3.5e-62

96.03

Show/hide

Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEE+DPWITFCALREEE+SMEVENDLTSYLSDKDVVDKEEFDIMYWWKMN YKYPILSTIVRDVLTVPISTVASESAFSTG RILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TVETLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

A0A5A7UR09 Zinc finger BED domain-containing protein RICESLEEPER 2-like

1.9e-60

94.44

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEEVDPWITFCALREEE+SMEVENDLT YLSDKDVV+KEEFDIMYWWKMN YKYPILSTIVRDVL VPISTVASESAFSTG RILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TVETLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

A0A5D3BZT5 Zinc finger BED domain-containing protein RICESLEEPER 1-like

1.6e-62

96.85

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEEVDPWITFCALREEENSMEVENDLTSYL DKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTG RILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLEG
        TVETLICTQNWI+G SVLLDLHPQLEG
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLEG

A0A5D3CE24 Zinc finger BED domain-containing protein RICESLEEPER 2-like

2.7e-62

96.83

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Query:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK
        MEVENDEEVDPWITFCALREEE+SMEVENDLTSYLSDKDVVDKEE DIMYWWKMNAYKYPILSTIVRDVL VPISTVASESAFSTGERILDSFRSSLTPK
Subjt:  MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPK

Query:  TVETLICTQNWIQGGSVLLDLHPQLE
        TVETLICTQNWI+GGSVLLDLHPQLE
Subjt:  TVETLICTQNWIQGGSVLLDLHPQLE

SwissProt top hits

e value

%identity

Alignment

B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 1

2.8e-16

44.44

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Query:  LREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVAS-ESAFS--TGERILDSFRSSLTPKTVETLICTQNWIQ
        L E   S   +++L  YL +      +EFDI+ WWK+N  KYP LS + RD+L +P+S V+S  S FS  TG R+LD +RSS  P+ VE L+C ++W+Q
Subjt:  LREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVAS-ESAFS--TGERILDSFRSSLTPKTVETLICTQNWIQ

P03010 Putative AC9 transposase

1.6e-16

43.36

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Query:  MEVENDEEVDPWITFCALREEENSMEVE-NDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTP
        ME E+DE  +       L E ++  +VE N+L  Y+S+  +    +FDI+ WW+    +YPIL+ I RDVL + +STVASESAFS G R++D +R+ L  
Subjt:  MEVENDEEVDPWITFCALREEENSMEVE-NDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTP

Query:  KTVETLICTQNWI
        + VE LICT++W+
Subjt:  KTVETLICTQNWI

P08770 Putative AC transposase

1.6e-16

43.36

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Query:  MEVENDEEVDPWITFCALREEENSMEVE-NDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTP
        ME E+DE  +       L E ++  +VE N+L  Y+S+  +    +FDI+ WW+    +YPIL+ I RDVL + +STVASESAFS G R++D +R+ L  
Subjt:  MEVENDEEVDPWITFCALREEENSMEVE-NDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTP

Query:  KTVETLICTQNWI
        + VE LICT++W+
Subjt:  KTVETLICTQNWI

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

1.6e-16

44.44

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Query:  LREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVAS-ESAFS--TGERILDSFRSSLTPKTVETLICTQNWIQ
        L E   S   +++L  YL +      +EFDI+ WWK+N  K+P LS + RD+L +P+S V+S  S FS  TG R+LD +RSSL P+ VE L+C ++W+Q
Subjt:  LREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVAS-ESAFS--TGERILDSFRSSLTPKTVETLICTQNWIQ

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3

2.3e-15

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Query:  LREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASE----SAFSTGERILDSFRSSLTPKTVETLICTQNWIQ
        L E   S    ++L  YL +  +   ++F+I+ WWK+N  K+P LS + RDVL +P+S V+S     SA +TG ++LD +RSSL P+TVE L C ++W+Q
Subjt:  LREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASE----SAFSTGERILDSFRSSLTPKTVETLICTQNWIQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G18560.1 BED zinc finger ;hAT family dimerisation domain

2.6e-09

32.69

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Query:  ALREEENSM--EVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPKTVETLICTQNWIQG
        A R+   SM   V ++LT YLS+  V    + D++ WWK+N+ +YP LS + RD L V  ++ A E  F      +D  +  +   + +++IC ++WI+ 
Subjt:  ALREEENSM--EVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPKTVETLICTQNWIQG

Query:  GSVL
        G  L
Subjt:  GSVL

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

2.8e-16

38.04

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Query:  EENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPKTVETLICTQNWI
        E     ++++L  YL +  +   +EFD++ WWK N  KYP LS + RD+L++P+S  A +  F    R +D +++SL P+TVE LIC + W+
Subjt:  EENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPKTVETLICTQNWI

Sequences

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CDS sequence

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ATGGAAGTGGAGAACGATGAAGAAGTTGATCCATGGATAACATTTTGTGCTTTGAGAGAAGAAGAAAACTCAATGGAAGTGGAGAATGACTTGACTTCTTATTTGTCTGA
CAAGGATGTAGTAGATAAAGAGGAATTTGATATTATGTATTGGTGGAAAATGAATGCGTACAAATATCCCATTCTATCAACAATTGTTCGTGATGTTCTGACGGTTCCAA
TATCTACGGTGGCTTCTGAATCTGCATTTAGTACAGGTGAAAGAATTCTTGATTCCTTTCGTAGTTCTTTGACTCCTAAAACAGTTGAAACTTTGATATGTACGCAAAAT
TGGATTCAAGGTGGCTCGGTGTTATTAGATCTTCATCCACAACTTGAAGGTTAG

mRNA sequence

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Protein sequence

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MEVENDEEVDPWITFCALREEENSMEVENDLTSYLSDKDVVDKEEFDIMYWWKMNAYKYPILSTIVRDVLTVPISTVASESAFSTGERILDSFRSSLTPKTVETLICTQN
WIQGGSVLLDLHPQLEG

Cmc04g0100741 (gene) of Melon (Charmono) v1.1 genome