CuGenDBv2

Gene ID	Cmc04g0100751
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	50S ribosomal protein L34
Genome location	CMiso1.1chr04:16887051..16903538
RNA-Seq Expression	Cmc04g0100751
Synteny	Cmc04g0100751
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000271 - Ribosomal protein L34 IPR020939 - Ribosomal protein L34, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581832.1 hypothetical protein SDJN03_21834, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-67

91.16

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTGNS MNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQ AH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDG+ SSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

XP_004141160.2 uncharacterized protein LOC101210601 [Cucumis sativus]

2.1e-73

97.96

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+S MNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQ AHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

XP_008447614.1 PREDICTED: uncharacterized protein LOC103490028 [Cucumis melo]

2.9e-75

100

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

XP_022955352.1 uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata]

5.9e-68

91.84

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTGNS MNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQ AH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

XP_023526192.1 uncharacterized protein LOC111789743 isoform X2 [Cucurbita pepo subsp. pepo]

1.0e-67

91.84

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTGNS MNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQ AH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIB6 Uncharacterized protein

1.0e-73

97.96

Show/hide

Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+S MNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQ AHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

A0A1S3BHV7 uncharacterized protein LOC103490028

1.4e-75

100

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

A0A6J1GBE4 uncharacterized protein LOC111452439

6.6e-65

87.07

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MAS LL+RTGNS +NRLRL+SAHQ +RIW SQ LSHGHG EVTPMLFPS+SKHQ A  LQQNDTES+R+L+SEGIFFPFGLPSLRFFLPDGD S+TQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

A0A6J1GTQ0 uncharacterized protein LOC111457406 isoform X2

2.9e-68

91.84

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTGNS MNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQ AH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

A0A6J1IXD9 uncharacterized protein LOC111480019 isoform X2

5.4e-67

91.16

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Query:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTGNS MNRLRLSS  QNN IW SQ+LS GHGV+VTPMLFPSVSKHQ AH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

SwissProt top hits

e value

%identity

Alignment

A3QJT4 50S ribosomal protein L34

2.9e-09

74.42

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Query:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        KRTFQPS ++RKR+HGF AR AT GGRKVIARR AKGR+R++A
Subjt:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

A8HAI3 50S ribosomal protein L34

2.9e-09

74.42

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Query:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        KRTFQPS ++RKR+HGF AR AT GGRKVIARR AKGR+R++A
Subjt:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

B0TQH4 50S ribosomal protein L34

2.9e-09

74.42

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Query:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        KRTFQPS ++RKR+HGF AR AT GGRKVIARR AKGR+R++A
Subjt:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

Q15MS4 50S ribosomal protein L34

2.9e-09

74.42

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Query:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        KRTFQPS ++RKR+HGF AR ATK GRKVIA R AKGR+R+TA
Subjt:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

Q47U32 50S ribosomal protein L34

2.9e-09

74.42

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Query:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        KRTFQPS ++RKRNHGF AR ATK GR VIARR AKGR+R++A
Subjt:  KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

Arabidopsis top hits

e value

%identity

Alignment

AT3G13882.1 Ribosomal protein L34

1.2e-37

59.33

Show/hide

Query:  MASKLLIRTGNSFMNRL---RLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQ
        MA+K LIR+G S MNR      ++  QNN     Q ++   G E+ P  FPS+S  Q +   + NDT SL++L   G  +P GLPSL FFLP+ D SS  
Subjt:  MASKLLIRTGNSFMNRL---RLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQ

Query:  EPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
        EP+LLFPKRTFQPSTIRRKRNHGFFARKATKGGR+VIARRIAKGR R+TA
Subjt:  EPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

AT3G13882.2 Ribosomal protein L34

2.9e-28

48.05

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Query:  GVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLP--------DGDASS-----------------------------------
        G E+ P  FPS+S  Q +   + NDT SL++L   G  +P GLPSL FFLP        D   SS                                   
Subjt:  GVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLP--------DGDASS-----------------------------------

Query:  --TQEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA
          + EP+LLFPKRTFQPSTIRRKRNHGFFARKATKGGR+VIARRIAKGR R+TA
Subjt:  --TQEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTCCAAACTTCTTATTCGTACGGGAAATTCTTTCATGAATCGATTACGATTAAGCTCAGCGCATCAGAATAACAGGATTTGGGGTAGCCAAGCTCTGTCCCATGG
CCATGGCGTTGAAGTCACTCCGATGCTTTTTCCTTCAGTCTCTAAGCACCAGATTGCTCATCCTTTGCAGCAGAATGACACCGAATCGTTGAGGCAGCTCCAATCGGAAG
GCATTTTCTTTCCTTTTGGGCTTCCGTCGCTCCGGTTCTTTCTGCCTGACGGAGATGCTTCTTCAACACAAGAACCGATGCTCTTATTTCCTAAAAGGACATTTCAACCT
AGCACCATCAGGCGAAAAAGGAATCATGGTTTTTTTGCTCGCAAAGCAACCAAGGGAGGACGGAAAGTTATTGCTCGAAGGATTGCAAAGGGGCGCTCAAGAATAACTGC
ATAA

mRNA sequence

Show/hide mRNA sequence

TTTTCCTTTTTTGTTTTTTTAATTTTAAAAGATGAAAAATGAAAAGAAAAAGGAAATGTACCCTACGGTTTCTCGCACTTTTGTTCACTCCCCACCCCCACCTTCGCCAC
AGCGCATACCGCCGCTAACCCACCGGGAATTTTCTTTCTTCTCCCTCGCTCTCCAGCGCCACCCACACCAACCTTACATTTTGTTGCACACTGCCACGCCCACCTTTGAT
TTCTAAGGGTTAGTGAGCTCGTTCTTTTGCTAATGGCGTCCAAACTTCTTATTCGTACGGGAAATTCTTTCATGAATCGATTACGATTAAGCTCAGCGCATCAGAATAAC
AGGATTTGGGGTAGCCAAGCTCTGTCCCATGGCCATGGCGTTGAAGTCACTCCGATGCTTTTTCCTTCAGTCTCTAAGCACCAGATTGCTCATCCTTTGCAGCAGAATGA
CACCGAATCGTTGAGGCAGCTCCAATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCGTCGCTCCGGTTCTTTCTGCCTGACGGAGATGCTTCTTCAACACAAGAACCGA
TGCTCTTATTTCCTAAAAGGACATTTCAACCTAGCACCATCAGGCGAAAAAGGAATCATGGTTTTTTTGCTCGCAAAGCAACCAAGGGAGGACGGAAAGTTATTGCTCGA
AGGATTGCAAAGGGGCGCTCAAGAATAACTGCATAATATTCATCTCAAGTCATGTCCATTTAAATTGCCCTGCCAATATCTGGTTGTGTTAGTTTTTTAAAATTTAAAAT
TAACTCAATAGAATGGTATCACTGGCTGAATAATCCCCCCTTTGTCGGTTTTCTTCTTAGGCCTCGGAATACAGTCTGTATAACCTTCCATATTGAAGTTTCAGTTACTC
TTCATTTTTATTTCTTTCTTAACTCAGCTAGAGAATAGTTTACTTTTGGTTCATGGTTGCTGTTGATGCTGGCTCCTGAGCAAATAAACATAACCCAAGTCTGTGAATGT
TGCGAAAAAGGAAGAGGATGTGATTTTTTAAGTCATTTTAGGACTAAAATTGTTACTTATCAGAATTTTATTTTGTTTTAATATTATTCT

Protein sequence

Show/hide protein sequence

MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQP
STIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA

Cmc04g0100751 (gene) of Melon (Charmono) v1.1 genome