| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0056619.1 retrotransposon protein [Cucumis melo var. makuwa] | 7.9e-57 | 86.15 | Show/hide |
Query: MDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVCLYVDDLIYTENDLV
MDVKSAFLHGNLNEEVY+DQP GYVQQSNARKVY LKK LYGLKQAPRAWY+RI+ YFIKVG +KC +EHTLFIKFQH N ILIVCLYVDDLIYT NDL+
Subjt: MDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVCLYVDDLIYTENDLV
Query: MFEEFKQSMMAEFEMTDLGMTHYFLGIELI
MFEEFKQSMMAEFEM DLGM HYFLGIE+I
Subjt: MFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| KAE8676825.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01307 [Hibiscus syriacus] | 3.1e-53 | 70.34 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+A+AAQ++W IFQ+DVKSAFLHG+L EEV++DQP GY + N KVY LKK LYGLKQAPRAWYNRIKTYF+K GF+KCP+E+TLFIK + + IV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDLIYT ++ VMFE FK+SMMAEFEM+DLGM HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| KZV47100.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Dorcoceras hygrometricum] | 8.2e-54 | 69.66 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ALAAQ +W IFQ+DVKSAFLHG+L E+VY+DQP GY++ N KVY LKK LYGLKQAPRAWY+RI+TYF+K GFKKCPYEHTLF KF+ +LIV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDL +T ND+ MFE+FK+SMM EF+M+DLG HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| RVW92024.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.2e-54 | 70.34 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ALAAQ++W IFQ+DVKSAFLHGNL E+V++DQP GY++ N KVY LKK LYGLKQAPRAWY+RI+ YF+K GF+KCPYEHTLF+K + +LIV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDLI+T ND VMFE FK+SMM EFEM+DLGM HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| RVX00732.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.5e-52 | 68.97 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ALAAQ++W IFQ+DV AFLHGNL E V++DQP GY++ N KVY LKK LYGLKQAPRAWY+RI+ YF+K GF+KCPYEHTLF+K + +LIV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDLI+T ND VMFE FK+SMM EFEM+DLGM HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z7CJ54 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 4.0e-54 | 69.66 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ALAAQ +W IFQ+DVKSAFLHG+L E+VY+DQP GY++ N KVY LKK LYGLKQAPRAWY+RI+TYF+K GFKKCPYEHTLF KF+ +LIV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDL +T ND+ MFE+FK+SMM EF+M+DLG HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| A0A438I5N6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-54 | 70.34 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ALAAQ++W IFQ+DVKSAFLHGNL E+V++DQP GY++ N KVY LKK LYGLKQAPRAWY+RI+ YF+K GF+KCPYEHTLF+K + +LIV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDLI+T ND VMFE FK+SMM EFEM+DLGM HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| A0A438IVG3 Retrovirus-related Pol polyprotein from transposon RE1 | 7.5e-53 | 68.97 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ALAAQ++W IFQ+DV AFLHGNL E V++DQP GY++ N KVY LKK LYGLKQAPRAWY+RI+ YF+K GF+KCPYEHTLF+K + +LIV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDLI+T ND VMFE FK+SMM EFEM+DLGM HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| A0A5A7USX8 Retrotransposon protein | 3.8e-57 | 86.15 | Show/hide |
Query: MDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVCLYVDDLIYTENDLV
MDVKSAFLHGNLNEEVY+DQP GYVQQSNARKVY LKK LYGLKQAPRAWY+RI+ YFIKVG +KC +EHTLFIKFQH N ILIVCLYVDDLIYT NDL+
Subjt: MDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVCLYVDDLIYTENDLV
Query: MFEEFKQSMMAEFEMTDLGMTHYFLGIELI
MFEEFKQSMMAEFEM DLGM HYFLGIE+I
Subjt: MFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| A0A6A2Y6A3 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.5e-53 | 70.34 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+A+AAQ++W IFQ+DVKSAFLHG+L EEV++DQP GY + N KVY LKK LYGLKQAPRAWYNRIKTYF+K GF+KCP+E+TLFIK + + IV
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
CLYVDDLIYT ++ VMFE FK+SMMAEFEM+DLGM HYFLGIE++
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.2e-18 | 36.11 | Show/hide |
Query: VVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQ-HSNNILIV
+++L Q N K+ QMDVK+AFL+G L EE+Y+ P G N+ V L K +YGLKQA R W+ + + F + ++I + + N + V
Subjt: VVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQ-HSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIEL
LYVDD++ D+ FK+ +M +F MTDL +F+GI +
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIEL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-22 | 36.11 | Show/hide |
Query: VVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVC
+++LAA + ++ Q+DVK+AFLHG+L EE+Y++QP G+ V L K LYGLKQAPR WY + ++ + K + ++ K NN +I+
Subjt: VVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVC
Query: LYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
LYVDD++ D + + K + F+M DLG LG++++
Subjt: LYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIELI
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.2e-15 | 34.88 | Show/hide |
Query: MDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVCLYVDDLIYTENDLV
MDV +AFL+ ++E +Y+ QP G+V + N V+ L +YGLKQAP W I K+GF + EH L+ + S+ + + +YVDDL+
Subjt: MDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIVCLYVDDLIYTENDLV
Query: MFEEFKQSMMAEFEMTDLGMTHYFLGIEL
+++ KQ + + M DLG FLG+ +
Subjt: MFEEFKQSMMAEFEMTDLGMTHYFLGIEL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-24 | 38.46 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ +A +W I Q+DV +AFL G L ++VY+ QP G++ + V L+K LYGLKQAPRAWY ++ Y + +GF + +LF+ Q +I+ +
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIE
+YVDD++ T ND + ++ F + D HYFLGIE
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-25 | 40.56 | Show/hide |
Query: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
+V+ +A +W I Q+DV +AFL G L +EVY+ QP G+V + V L+K +YGLKQAPRAWY ++TY + VGF + +LF+ Q +I+ +
Subjt: MVVALAAQSNWKIFQMDVKSAFLHGNLNEEVYLDQPSGYVQQSNARKVYCLKKVLYGLKQAPRAWYNRIKTYFIKVGFKKCPYEHTLFIKFQHSNNILIV
Query: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIE
+YVDD++ T ND V+ + ++ F + + HYFLGIE
Subjt: CLYVDDLIYTENDLVMFEEFKQSMMAEFEMTDLGMTHYFLGIE
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