; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0100841 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0100841
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr04:17033806..17034195
RNA-Seq ExpressionCmc04g0100841
SyntenyCmc04g0100841
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054574.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.6e-5689.06Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQM+NCN AT PVEPNLKLTKD EGKK+NSTLYKQMVGSLMYLTATRPDIMYAVS ISRFM SP KFHL+AAKRILRYIKGTPDL +LYQRRRKLNLVGF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDLND+KS SGYVFMLGSG IS
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

TYK23210.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.6e-5685.94Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQ++NCN A TP++PN+KLTKDHEGKKVNSTLYKQMVGSLMYLT T+PDIMYAVSLISRFMESPT+FHL+A+KRILRYIKGTPDL ILYQR+RKLN VGF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDLND+KSTSGYVFML SG IS
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

XP_016901936.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.6e-5689.06Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQM+NCN AT PVEPNLKLTKD EGKK+NSTLYKQMVGSLMYLTATRPDIMYAVS ISRFM SP KFHL+AAKRILRYIKGTPDL +LYQRRRKLNLVGF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDLND+KS SGYVFMLGSG IS
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

XP_038889278.1 uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]1.0e-5586.72Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQMENCN ATT +EPNLKLTKDHEGKKVN+TLYKQM+GSLMYLTATRPDIMYAVSLISRFMESPTK HL+ AKRIL Y+KGTP L ILYQ+R KLNLVGF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDLND+ STSGYVFMLG GAIS
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

XP_038904408.1 secreted RxLR effector protein 161-like [Benincasa hispida]1.1e-5486.51Show/hide
Query:  MENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSD
        MENCN ATTPVEPNLKLTKDHEGKKVNST+YKQMVGSLMYLT TRPDIMYAVSLISRFMESPT+ H +AAKRILRY+KGTP L ILYQ+  KLNLVGFSD
Subjt:  MENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSD

Query:  SDYAGDLNDKKSTSGYVFMLGSGAIS
        SDY GDLND+KST GY+FMLGSGAIS
Subjt:  SDYAGDLNDKKSTSGYVFMLGSGAIS

TrEMBL top hitse value%identityAlignment
A0A1S4E135 uncharacterized mitochondrial protein AtMg00810-like7.6e-5789.06Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQM+NCN AT PVEPNLKLTKD EGKK+NSTLYKQMVGSLMYLTATRPDIMYAVS ISRFM SP KFHL+AAKRILRYIKGTPDL +LYQRRRKLNLVGF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDLND+KS SGYVFMLGSG IS
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

A0A5D3DIK7 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-5685.94Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQ++NCN A TP++PN+KLTKDHEGKKVNSTLYKQMVGSLMYLT T+PDIMYAVSLISRFMESPT+FHL+A+KRILRYIKGTPDL ILYQR+RKLN VGF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDLND+KSTSGYVFML SG IS
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

A0A5D3DVM8 Putative mitochondrial protein7.6e-5789.06Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQM+NCN AT PVEPNLKLTKD EGKK+NSTLYKQMVGSLMYLTATRPDIMYAVS ISRFM SP KFHL+AAKRILRYIKGTPDL +LYQRRRKLNLVGF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDLND+KS SGYVFMLGSG IS
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

A0A6P5SZW2 uncharacterized protein LOC1107615171.3e-4368.75Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        FQM++CN  +TP E  LKL KDHEGKKV+ST+YKQ+VGSLMYLTATRP IMY+VSLIS +ME+PT+ HL+AAKRILRY++GT D  + Y++  KL L GF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        +DSDYAGD +D++STSGYVFMLG+GA+S
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

A0A7J0E3Y2 Integrase catalytic domain-containing protein3.7e-4369.53Show/hide
Query:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF
        F+M++CN   TPVE  LKLTK+ EGKKV++TLYKQ+VGSLMY T+TRPDIM+AVSLISR+ME+PT+ HL+ AKRI RY+KGT DL ILY+R    +L+GF
Subjt:  FQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGF

Query:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS
        SDSDYAGDL+D+KSTSGY FM+ SGA+S
Subjt:  SDSDYAGDLNDKKSTSGYVFMLGSGAIS

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1614.8e-1643.3Show/hide
Query:  YKQMVGSLMYL-TATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDLNDKKSTSGYVFMLGSGAIS
        Y   VG++MYL   TRPD+  AV ++S+F   P   H  A KR+LRY++ T    + + R     LVG+SD+D+AGD+  ++STSGY+F L  G +S
Subjt:  YKQMVGSLMYL-TATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDLNDKKSTSGYVFMLGSGAIS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.9e-1940.74Show/hide
Query:  FQMENCNLATTPVEPNLKLTKD------HEGKKVNSTLYKQMVGSLMY-LTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRR
        F M+N    +TP+  +LKL+K        E   +    Y   VGSLMY +  TRPDI +AV ++SRF+E+P K H  A K ILRY++GT    + +    
Subjt:  FQMENCNLATTPVEPNLKLTKD------HEGKKVNSTLYKQMVGSLMY-LTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRR

Query:  KLNLVGFSDSDYAGDLNDKKSTSGYVFMLGSGAIS
         + L G++D+D AGD++++KS++GY+F    GAIS
Subjt:  KLNLVGFSDSDYAGDLNDKKSTSGYVFMLGSGAIS

P92519 Uncharacterized mitochondrial protein AtMg008101.4e-1538.58Show/hide
Query:  MENCNLATTPVEPNLKLTKD-HEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFS
        M +C   +TP+   LKL       K  + + ++ +VG+L YLT TRPDI YAV+++ + M  PT       KR+LRY+KGT    +   +  KLN+  F 
Subjt:  MENCNLATTPVEPNLKLTKD-HEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFS

Query:  DSDYAGDLNDKKSTSGYVFMLGSGAIS
        DSD+AG  + ++ST+G+   LG   IS
Subjt:  DSDYAGDLNDKKSTSGYVFMLGSGAIS

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.0e-2348.74Show/hide
Query:  TTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDL
        TTP+ P+ KL+     K  + T Y+ +VGSL YL  TRPDI YAV+ +S+FM  PT+ HL A KRILRY+ GTP+  I  ++   L+L  +SD+D+AGD 
Subjt:  TTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDL

Query:  NDKKSTSGYVFMLGSGAIS
        +D  ST+GY+  LG   IS
Subjt:  NDKKSTSGYVFMLGSGAIS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE28.5e-2145.76Show/hide
Query:  TPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDLN
        TP+  + KLT     K  + T Y+ +VGSL YL  TRPD+ YAV+ +S++M  PT  H  A KR+LRY+ GTPD  I  ++   L+L  +SD+D+AGD +
Subjt:  TPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDLN

Query:  DKKSTSGYVFMLGSGAIS
        D  ST+GY+  LG   IS
Subjt:  DKKSTSGYVFMLGSGAIS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.5e-1734.96Show/hide
Query:  CNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDY
        C  ++ P++P++  +    G  V++  Y++++G LMYL  TR DI +AV+ +S+F E+P   H  A  +IL YIKGT    + Y  + ++ L  FSD+ +
Subjt:  CNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDY

Query:  AGDLNDKKSTSGYVFMLGSGAIS
            + ++ST+GY   LG+  IS
Subjt:  AGDLNDKKSTSGYVFMLGSGAIS

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.4e-0935.9Show/hide
Query:  MYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDLNDKKSTSGY
        MYLT TRPD+ +AV+ +S+F  +     + A  ++L Y+KGT    + Y     L L  F+DSD+A   + ++S +G+
Subjt:  MYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDLNDKKSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein9.9e-1738.58Show/hide
Query:  MENCNLATTPVEPNLKLTKD-HEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFS
        M +C   +TP+   LKL       K  + + ++ +VG+L YLT TRPDI YAV+++ + M  PT       KR+LRY+KGT    +   +  KLN+  F 
Subjt:  MENCNLATTPVEPNLKLTKD-HEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFS

Query:  DSDYAGDLNDKKSTSGYVFMLGSGAIS
        DSD+AG  + ++ST+G+   LG   IS
Subjt:  DSDYAGDLNDKKSTSGYVFMLGSGAIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAAATGGAGAATTGCAACTTAGCTACAACTCCAGTTGAACCCAATTTGAAGCTTACAAAGGACCATGAAGGAAAGAAGGTCAATAGTACTCTTTATAAGCAAAT
GGTTGGAAGTTTGATGTACTTAACAGCTACAAGGCCTGATATTATGTATGCAGTAAGTTTAATTAGCAGGTTTATGGAATCTCCAACTAAGTTTCATCTCATTGCTGCCA
AAAGAATCTTACGTTACATAAAAGGGACTCCTGATCTTAGCATACTTTATCAAAGAAGAAGAAAATTAAACCTTGTTGGTTTTAGTGATAGTGATTATGCAGGAGATTTA
AATGATAAAAAGAGTACTTCAGGATATGTTTTCATGCTTGGTTCAGGAGCTATCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCAAATGGAGAATTGCAACTTAGCTACAACTCCAGTTGAACCCAATTTGAAGCTTACAAAGGACCATGAAGGAAAGAAGGTCAATAGTACTCTTTATAAGCAAAT
GGTTGGAAGTTTGATGTACTTAACAGCTACAAGGCCTGATATTATGTATGCAGTAAGTTTAATTAGCAGGTTTATGGAATCTCCAACTAAGTTTCATCTCATTGCTGCCA
AAAGAATCTTACGTTACATAAAAGGGACTCCTGATCTTAGCATACTTTATCAAAGAAGAAGAAAATTAAACCTTGTTGGTTTTAGTGATAGTGATTATGCAGGAGATTTA
AATGATAAAAAGAGTACTTCAGGATATGTTTTCATGCTTGGTTCAGGAGCTATCTCATAG
Protein sequenceShow/hide protein sequence
MFQMENCNLATTPVEPNLKLTKDHEGKKVNSTLYKQMVGSLMYLTATRPDIMYAVSLISRFMESPTKFHLIAAKRILRYIKGTPDLSILYQRRRKLNLVGFSDSDYAGDL
NDKKSTSGYVFMLGSGAIS